CN187171

Overview
NameCN187171
Unique NameCN187171
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length719
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN187171 vs. ExPASy Swiss-Prot
Match: UMPK_ARATH (Uridylate kinase OS=Arabidopsis thaliana GN=PYR6 PE=1 SV=1)

HSP 1 Score: 253.447 bits (646), Expect = 8.620e-67
Identity = 123/148 (83.11%), Postives = 138/148 (93.24%), Query Frame = -2
Query:  275 SGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDKFLIDGFPRNEENRAAFEAVTKIEPEFVLFFDCSEEEMERRILNRNQGREDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVFDAVKAVFTPKDEKAAA 718
            SGSENGTMIQNMIKEGKIVPSEVTIKLLQKA++E+GNDKFLIDGFPRNEENRAAFE VT+IEP+FVLFFDC EEEME+R+L RNQGREDDN+ETIRKRFKVFLESSLPV+ YYEAKGKVRKI+AAKP+  VF+ VKA+F+P+ EK  A
Sbjct:   55 SGSENGTMIQNMIKEGKIVPSEVTIKLLQKAIQENGNDKFLIDGFPRNEENRAAFEKVTEIEPKFVLFFDCPEEEMEKRLLGRNQGREDDNIETIRKRFKVFLESSLPVIHYYEAKGKVRKINAAKPIEAVFEEVKAIFSPEAEKVEA 202          
BLAST of CN187171 vs. ExPASy Swiss-Prot
Match: KAD_PRUAR (Adenylate kinase OS=Prunus armeniaca PE=2 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 1.481e-42
Identity = 81/141 (57.45%), Postives = 108/141 (76.60%), Query Frame = -2
Query:  296 SGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDKFLIDGFPRNEENRAAFEAVTKIEPEFVLFFDCSEEEMERRILNRNQGREDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVFDAVKAVFTP 718
            SGS  G++I + I+EGKIVPS+VT++L+QK ME S N KFLIDGFPR+EENR AFE     EP+ VLFFDC E+EM +R+LNRNQGR DDN++TI+KR ++F E + PV+ YY  +GK+ KI+A   V E+F+ V+ +F P
Sbjct:   88 SGSAYGSVILSTIREGKIVPSQVTVELIQKEMESSDNYKFLIDGFPRSEENRKAFEQTIGAEPDVVLFFDCPEQEMVKRVLNRNQGRVDDNIDTIKKRLEIFDELNWPVINYYSQRGKLHKINAVGTVDEIFEKVRPIFAP 228          
BLAST of CN187171 vs. ExPASy Swiss-Prot
Match: KCY_XENLA (UMP-CMP kinase OS=Xenopus laevis GN=cmpk1 PE=2 SV=2)

HSP 1 Score: 133.65 bits (335), Expect = 9.955e-31
Identity = 70/146 (47.95%), Postives = 97/146 (66.44%), Query Frame = -2
Query:  302 SENGTMIQNMIKEGKIVPSEVTIKLLQKAME-----ESGNDKFLIDGFPRNEENRAAFEAVT--KIEPEFVLFFDCSEEEMERRILNRNQ--GREDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVFDAVKAVF 712
            S+ G +I++ I++GKIVP E+TI LLQ+AME     ++   KFLIDGFPRNE+N   +E     K +  FVLFFDC  E    R L R +  GR DDN E++ KR + +L+S+ P++  YE +GKVRK+DA+K V EVF  V+ +F
Sbjct:   47 SQYGELIESYIRDGKIVPVEITISLLQRAMERTMAFDANKHKFLIDGFPRNEDNLQGWERTMNGKADVSFVLFFDCDNETCIERCLERGKSSGRSDDNRESLEKRIQTYLQSTRPIIDLYEKRGKVRKVDASKSVDEVFTKVQNIF 192          
BLAST of CN187171 vs. ExPASy Swiss-Prot
Match: KCY_CHICK (UMP-CMP kinase OS=Gallus gallus GN=CMPK1 PE=2 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 6.453e-30
Identity = 70/147 (47.62%), Postives = 96/147 (65.31%), Query Frame = -2
Query:  302 GSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEE-----SGNDKFLIDGFPRNEENRAAFEAVT--KIEPEFVLFFDCSEEEMERRILNRNQ--GREDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVFDAVKAVF 715
            GS+ G +I+N IKEG+IVP E+TI LL++AM++     S  +KFLIDGFPRNE+N   +      K +  FVLFFDC  E    R L R +  GR DDN E++ KR   +L+S+ P++  YE  GKVR++DA+K V EVF+ V  +F
Sbjct:   46 GSQYGELIENYIKEGEIVPVEITISLLKRAMDQTMAANSQKNKFLIDGFPRNEDNLQGWNKTMDGKADVSFVLFFDCDNEICIGRCLERGKSSGRSDDNRESLEKRIHTYLQSTRPIIDLYERMGKVRRVDASKSVDEVFEKVVQIF 192          
BLAST of CN187171 vs. ExPASy Swiss-Prot
Match: KCY_XENTR (UMP-CMP kinase OS=Xenopus tropicalis GN=cmpk1 PE=2 SV=2)

HSP 1 Score: 130.568 bits (327), Expect = 8.427e-30
Identity = 70/146 (47.95%), Postives = 98/146 (67.12%), Query Frame = -2
Query:  302 SENGTMIQNMIKEGKIVPSEVTIKLLQKAMEES----GND-KFLIDGFPRNEENRAAFEAVT--KIEPEFVLFFDCSEEEMERRILNRNQ--GREDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVFDAVKAVF 712
            S+ G +I++ I++G+IVP E+TI LLQ+AME++    GN  KFLIDGFPRNE+N   +E     K +  FVLFFDC  E    R L R +  GR DDN E++ KR + +L+S+ P++  YE  GKV+K+DA+K V EVF  V+ +F
Sbjct:   47 SQYGELIESYIRDGRIVPVEITISLLQRAMEQTMALDGNKHKFLIDGFPRNEDNLQGWERTMNGKADVSFVLFFDCDNETCIERCLERGKSSGRSDDNRESLEKRIQTYLQSTRPIIDLYEKTGKVKKVDASKSVDEVFTKVQDIF 192          
BLAST of CN187171 vs. ExPASy Swiss-Prot
Match: KCY_DICDI (Cytidylate kinase OS=Dictyostelium discoideum GN=pyrK PE=1 SV=2)

HSP 1 Score: 128.257 bits (321), Expect = 4.182e-29
Identity = 68/143 (47.55%), Postives = 97/143 (67.83%), Query Frame = -2
Query:  302 SGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDKFLIDGFPRNEENRAAFEAVTK--IEPEFVLFFDCSEEEMERRILNRNQ--GREDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVFDAVKAVF 718
            SGS++G MI  MIK G+IVPS VT+KLL+ A++ +    FL+DGFPRNEEN  ++E   K  ++ +FVLFFDC EE M +R+L R +  GR DDN+E+I+KRF  F   +  V+ +Y    KV+ I A + V EV++ V+ +F
Sbjct:   48 SGSKDGEMIATMIKNGEIVPSIVTVKLLKNAIDANQGKNFLVDGFPRNEENNNSWEENMKDFVDTKFVLFFDCPEEVMTQRLLKRGESSGRSDDNIESIKKRFNTFNVQTKLVIDHYNKFDKVKIIPANRDVNEVYNDVENLF 190          
BLAST of CN187171 vs. ExPASy Swiss-Prot
Match: KCY_HUMAN (UMP-CMP kinase OS=Homo sapiens GN=CMPK1 PE=1 SV=3)

HSP 1 Score: 127.487 bits (319), Expect = 7.134e-29
Identity = 68/146 (46.58%), Postives = 95/146 (65.07%), Query Frame = -2
Query:  302 SENGTMIQNMIKEGKIVPSEVTIKLLQKAMEES-----GNDKFLIDGFPRNEENRAAFEAVT--KIEPEFVLFFDCSEEEMERRILNRNQ--GREDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVFDAVKAVF 712
            S+ G +I+  IKEGKIVP E+TI LL++ M+++       +KFLIDGFPRN++N   +      K +  FVLFFDC+ E    R L R +  GR DDN E++ KR + +L+S+ P++  YE  GKV+KIDA+K V EVFD V  +F
Sbjct:   47 SQYGELIEKYIKEGKIVPVEITISLLKREMDQTMAANAQKNKFLIDGFPRNQDNLQGWNKTMDGKADVSFVLFFDCNNEICIERCLERGKSSGRSDDNRESLEKRIQTYLQSTKPIIDLYEEMGKVKKIDASKSVDEVFDEVVQIF 192          
BLAST of CN187171 vs. ExPASy Swiss-Prot
Match: KCY_BOVIN (UMP-CMP kinase OS=Bos taurus GN=CMPK1 PE=2 SV=2)

HSP 1 Score: 127.487 bits (319), Expect = 7.134e-29
Identity = 68/146 (46.58%), Postives = 95/146 (65.07%), Query Frame = -2
Query:  302 SENGTMIQNMIKEGKIVPSEVTIKLLQKAMEES-----GNDKFLIDGFPRNEENRAAFEAVT--KIEPEFVLFFDCSEEEMERRILNRNQ--GREDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVFDAVKAVF 712
            S+ G +I+  IK+GKIVP E+TI LL++ M+++       +KFLIDGFPRN++N   +      K +  FVLFFDC+ E    R L R +  GR DDN E++ KR + +L+S+ P++  YE  GKVRKIDA+K V EVFD V  +F
Sbjct:   47 SQYGELIEKYIKDGKIVPVEITISLLRREMDQTMAANAQKNKFLIDGFPRNQDNLQGWNKTMDGKADVSFVLFFDCNNEICIERCLERGKSSGRSDDNRESLEKRIQTYLQSTKPIIDLYEEMGKVRKIDASKSVDEVFDEVVKIF 192          
BLAST of CN187171 vs. ExPASy Swiss-Prot
Match: KCY_DANRE (UMP-CMP kinase OS=Danio rerio GN=cmpk1 PE=2 SV=2)

HSP 1 Score: 127.102 bits (318), Expect = 9.318e-29
Identity = 71/150 (47.33%), Postives = 99/150 (66.00%), Query Frame = -2
Query:  290 SENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGND-----KFLIDGFPRNEENRAAF--EAVTKIEPEFVLFFDCSEEEMERRILNRNQ--GREDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVFDAVKAVFTPKD 712
            SE G +I + IKEGKIVP ++TI LL+KAMEE+        +FLIDGFPRN++N   +  E   K + +FVLFFDCS E    R L R +  GR DDN E++ KR + +L+S+ P+++ YE +GKV++IDA++ V EVF  VK +    D
Sbjct:   47 SEFGQLIDSYIKEGKIVPVQITINLLRKAMEETMKADEKKFRFLIDGFPRNQDNLQGWNTEMDGKADVKFVLFFDCSNEVCIDRCLERGKSSGRTDDNRESLEKRIQTYLQSTRPIIELYEKQGKVQRIDASRSVDEVFADVKNILEKDD 196          
BLAST of CN187171 vs. ExPASy Swiss-Prot
Match: KCY_PIG (UMP-CMP kinase OS=Sus scrofa GN=CMPK1 PE=1 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.589e-28
Identity = 67/146 (45.89%), Postives = 95/146 (65.07%), Query Frame = -2
Query:  302 SENGTMIQNMIKEGKIVPSEVTIKLLQKAMEES-----GNDKFLIDGFPRNEENRAAFEAVT--KIEPEFVLFFDCSEEEMERRILNRNQ--GREDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVFDAVKAVF 712
            S+ G +I+  IK+GKIVP E+TI LL++ M+++       +KFLIDGFPRN++N   +      K +  FVLFFDC+ E    R L R +  GR DDN E++ KR + +L+S+ P++  YE  GKV+KIDA+K V EVFD V  +F
Sbjct:   47 SQYGELIEKYIKDGKIVPVEITISLLRREMDQTMAANAQKNKFLIDGFPRNQDNLQGWNKTMDGKADVSFVLFFDCNNEICIERCLERGKSSGRSDDNRESLEKRIQTYLQSTKPIIDLYEEMGKVKKIDASKSVDEVFDEVVKIF 192          
The following BLAST results are available for this feature:
BLAST of CN187171 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 110
Match NameE-valueIdentityDescription
UMPK_ARATH8.620e-6783.11Uridylate kinase OS=Arabidopsis thaliana GN=PYR6 P... [more]
KAD_PRUAR1.481e-4257.45Adenylate kinase OS=Prunus armeniaca PE=2 SV=1[more]
KCY_XENLA9.955e-3147.95UMP-CMP kinase OS=Xenopus laevis GN=cmpk1 PE=2 SV=... [more]
KCY_CHICK6.453e-3047.62UMP-CMP kinase OS=Gallus gallus GN=CMPK1 PE=2 SV=1[more]
KCY_XENTR8.427e-3047.95UMP-CMP kinase OS=Xenopus tropicalis GN=cmpk1 PE=2... [more]
KCY_DICDI4.182e-2947.55Cytidylate kinase OS=Dictyostelium discoideum GN=p... [more]
KCY_HUMAN7.134e-2946.58UMP-CMP kinase OS=Homo sapiens GN=CMPK1 PE=1 SV=3[more]
KCY_BOVIN7.134e-2946.58UMP-CMP kinase OS=Bos taurus GN=CMPK1 PE=2 SV=2[more]
KCY_DANRE9.318e-2947.33UMP-CMP kinase OS=Danio rerio GN=cmpk1 PE=2 SV=2[more]
KCY_PIG1.589e-2845.89UMP-CMP kinase OS=Sus scrofa GN=CMPK1 PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0004A20_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0004A20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN187171 ID=CN187171; Name=CN187171; organism=Citrus sinensis; type=EST; length=719bp
CTTTTTTGACCGTGAAATTCAATCAATTACTTTTTTTTTTTTTTAAAGCC
TTAATGCTGTTATTATTACTCTTGATCTTGCTATTACCCTCTCAATAACA
AGAATACATAGGCAAACAAGAATAAATATCATGATACACTATGAACTTCT
ATGACATTCTCGTAAAACATGGGGCATAATAACCTCATAATAATAAAGTA
CAATAATAGGCAGCAGCCAACAACAATACCACCACCTTGATATTAAATCT
GATACTCTGGACAGAGAAGACCTAAGCAGCAGCCTTCTCATCTTTTGGGG
TAAAAACAGCTTTAACAGCATCAAAAACCTCTGCAACAGGCTTTGCAGCA
TCAATCTTCCGAACTTTACCCTTAGCTTCATAATATTGAACCACAGGGAG
ACTAGATTCTAAGAAAACCTTAAACCGCTTCCTAATTGTCTCAACGTTAT
CATCTTCTCTTCCCTGATTCCTATTCAAAATGCGCCTCTCCATCTCCTCC
TCAGAACAGTCAAAAAACAGAACGAATTCTGGCTCAATTTTGGTAACAGC
TTCAAATGCAGCACGATTTTCCTCGTTTCTGGGAAAACCATCGATGAGAA
ATTTATCATTTCCACTTTCCTCCATTGCTTTTTGGAGAAGCTTAATTGTG
ACCTCTGAAGGAACGATTTTTCCCTCTTTAATCATGTTCTGAATCATGGT
TCCATTTTCAGAGCCAGAT
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