CK937258

Overview
NameCK937258
Unique NameCK937258
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length836
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13631 contig Csv1_Contig13631:35..870. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK937258 vs. ExPASy Swiss-Prot
Match: SUGT1_DICDI (Protein SUGT1 homolog OS=Dictyostelium discoideum GN=sugt1 PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.808e-24
Identity = 75/266 (28.20%), Postives = 121/266 (45.49%), Query Frame = 3
Query:  111 KKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGGSRFTNLIKECEERIAEE---------------TGELQKQPLETGPTNVVSTNNVQPAT---------NISSTEDVETVMDVSNEAAMAAPARPKYRHEFYQKPEEVVVTVFAKGIPAKNVTVDFGEQILSVSIDVPGEEAYHFQPRLFGKIIPAQCRYEVLSTKVEIRL 836
            K+    F+D+ ++ A   Y +A     N+AE F  R+Q   KL N  EA++D N +I+L+ + SK Y +K   C +LEE++TA    EKG S+    S F   I++ +  I                  T   Q     T PT + +T+N    T         N ++  +  T  D +        +  K RHE+YQ    VV+T+FAK + A N  ++   + +++S  +     + F+  LF  I+         STKVEI++
Sbjct:    5 KEGNSYFVDEQYDEALKCYDKACLELSNNAEAFFKRSQCHSKLSNLKEALSDINTSIKLDSNNSKYYLKKGQLCFELEEFDTALKTFEKGQSIDSENSSFKTWIRKSKAEIQSNPTTTTTTTPTPTPTPTPAPQPVTTTTNPTPIPTTSNTTTTTNNNNNNNNNNNNNNNNNNTTTDSTTTKLPIPSSGNKVRHEWYQTETHVVLTIFAKFVTASNSKINLTSKSVNISFPLANGSEFLFEMDLFDPIVDKDSTIHYYSTKVEIKM 270          
BLAST of CK937258 vs. ExPASy Swiss-Prot
Match: SUGT1_BOVIN (Suppressor of G2 allele of SKP1 homolog OS=Bos taurus GN=SUGT1 PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 6.019e-20
Identity = 66/247 (26.72%), Postives = 112/247 (45.34%), Query Frame = 3
Query:   96 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGGSRFTNLIKECEERIAEETGELQKQPLETGPTNVVSTNNVQPATNISSTEDVETVMDVSNEAAMAAPARPKYRHEFYQKPEEVVVTVFAKGIPAKNVTVDFGEQILSVSIDVPGEEAYHFQPRLFGKIIPAQCRYEVLSTKVEIRL 836
            A+ L +   +A I+   + A +  ++A+E  P+ A  +  RA   I L N+++AVADA +++EL P+ S A  RK       + Y  A     +G  L    +  T  IK C+E                      + N  QP  + S                     + K ++++YQ   +V++T+  K +   +V V+F E+ LS  + +P  + Y  + RL   IIP Q  ++VLSTK+EI++
Sbjct:   12 ASRLFRSFSDALIEQDPQAALEELTKALEQKPDDAPYYCQRAYCHILLGNYSDAVADAKKSLELNPNSSTALLRKGICEYHEKNYAAALETFTEGQKLNSADADLTAWIKRCQE----------------------AQNGSQPEVSASQRTH-----------------QSKIKYDWYQTESQVIITLMIKNVQKNDVNVEFSEKELSALVKLPSGDDYSLKLRLLHPIIPEQSTFKVLSTKIEIKM 219          
BLAST of CK937258 vs. ExPASy Swiss-Prot
Match: SUGT1_MOUSE (Suppressor of G2 allele of SKP1 homolog OS=Mus musculus GN=Sugt1 PE=2 SV=3)

HSP 1 Score: 90.8929 bits (224), Expect = 9.609e-18
Identity = 60/238 (25.21%), Postives = 106/238 (44.54%), Query Frame = 3
Query:  123 EAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGGSRFTNLIKECEERIAEETGELQKQPLETGPTNVVSTNNVQPATNISSTEDVETVMDVSNEAAMAAPARPKYRHEFYQKPEEVVVTVFAKGIPAKNVTVDFGEQILSVSIDVPGEEAYHFQPRLFGKIIPAQCRYEVLSTKVEIRL 836
            +A ID   + A +  ++A+E +P+ A+ +  RA   I L  + + +AD  +++EL P+   A  RK       ++Y +A     +G  L    + F   IK C+E             ++ G  + VS +                              + K ++++YQ    V++T+  K +   +V V F E+ LS  + +P  E Y  + RL   IIP Q  ++VLSTK+EI++
Sbjct:   20 DALIDGDPQAALEELTKALEQNPDDAQYYCQRAYCHILLGKYRDGIADVKKSLELNPNNCTALLRKGICEYHEKDYASALETFAEGQKLDSTDTNFDTWIKRCQE-------------IQNGSESEVSASQ---------------------------RTQSKIKYDWYQTESHVIITLMIKSVQKNDVRVGFSERELSALVKIPAGEDYSLKLRLLHPIIPEQSTFKVLSTKIEIKM 217          
BLAST of CK937258 vs. ExPASy Swiss-Prot
Match: SUGT1_HUMAN (Suppressor of G2 allele of SKP1 homolog OS=Homo sapiens GN=SUGT1 PE=1 SV=3)

HSP 1 Score: 88.5817 bits (218), Expect = 4.769e-17
Identity = 64/239 (26.78%), Postives = 115/239 (48.12%), Query Frame = 3
Query:  123 EAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGGSRFTNLIKECEERIAEETGELQKQPLETGPTNVVSTNNVQPATNISSTEDVETVMDVSNEAAMAA-PARPKYRHEFYQKPEEVVVTVFAKGIPAKNVTVDFGEQILSVSIDVPGEEAYHFQPRLFGKIIPAQCRYEVLSTKVEIRL 836
            +A ID+  + A +  ++A+E  P+ A+ +  RA   I L N+  AVADA +++EL P+ S A  RK       + Y  A     +G  L          I+    R+ +   +L      + P  + S +      + + +  ++   +  N +       + K ++++YQ   +VV+T+  K +   +V V+F E+ LS  + +P  E Y+ +  L   IIP Q  ++VLSTK+EI+L
Sbjct:   20 DALIDEDPQAALEELTKALEQKPDDAQYYCQRAYCHILLGNYCVAVADAKKSLELNPNNSTAMLRKGICEYHEKNYAAALETFTEGQKLD---------IETGFHRVGQAGLQLLTS---SDPPALDSQSAGITGADANFSVWIKRCQEAQNGSESEVWTHQSKIKYDWYQTESQVVITLMIKNVQKNDVNVEFSEKELSALVKLPSGEDYNLKLELLHPIIPEQSTFKVLSTKIEIKL 246          
BLAST of CK937258 vs. ExPASy Swiss-Prot
Match: PPP5_SOLLC (Serine/threonine-protein phosphatase 5 OS=Solanum lycopersicum GN=PP5 PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.299e-14
Identity = 41/116 (35.34%), Postives = 68/116 (58.62%), Query Frame = 3
Query:   96 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGGSRFTNLIKECEERI 443
            A +L++ A EAF    +  A DLY+QAIE++  +A  +A+RA A  KL+ +  A+ D  RAIE++P  SK Y+R+  A + + +++ A    ++   L P     T  +KECE+ +
Sbjct:   14 AEELKQLANEAFKGHKYSQAIDLYTQAIELNGENAVYYANRAFAHTKLEEYGSAIQDGTRAIEIDPRYSKGYYRRGAAYLAMGKFKDALKDFQQVKKLCPNDPDATKKLKECEKAV 129          
BLAST of CK937258 vs. ExPASy Swiss-Prot
Match: PPP5_ARATH (Serine/threonine-protein phosphatase 5 OS=Arabidopsis thaliana GN=PAPP5 PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.099e-13
Identity = 39/116 (33.62%), Postives = 70/116 (60.34%), Query Frame = 3
Query:   96 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGGSRFTNLIKECEERI 443
            A + + +A EAF    +  A DLY++AIE++ N+A  +A+RA A  KL+ +  A+ DA++AIE++   SK Y+R+  A + + +++ A    ++   L+P     T  +KECE+ +
Sbjct:   13 AEEFKSQANEAFKGHKYSSAIDLYTKAIELNSNNAVYWANRAFAHTKLEEYGSAIQDASKAIEVDSRYSKGYYRRGAAYLAMGKFKDALKDFQQVKRLSPNDPDATRKLKECEKAV 128          
BLAST of CK937258 vs. ExPASy Swiss-Prot
Match: SGTB_RAT (Small glutamine-rich tetratricopeptide repeat-containing protein beta OS=Rattus norvegicus GN=Sgtb PE=1 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.178e-13
Identity = 48/174 (27.59%), Postives = 86/174 (49.43%), Query Frame = 3
Query:   96 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGGSRFTNLIKECEERIAEETGELQKQPLETGPTNVVST--NN---VQPATNISSTEDVETVMDVSNEAAMAAPA 602
            A  L+ +      ++ +  A D Y+QAIE+ PN+A  + +RA A  KL ++T+A+ D  +AI ++   SKAY R   A   + ++E A  + +K   L P    + + +K  E+++ E +      P  TG T  +++  NN   +  A ++     V+ +M      A+  PA
Sbjct:   85 ADQLKDEGNNHMKEENYAAAVDCYTQAIELDPNNAVYYCNRAAAQSKLSHYTDAIKDCEKAIAIDSKYSKAYGRMGLALTAMNKFEEAVTSYQKALDLDPENDSYKSNLKIAEQKLREVS-----SPTGTGLTFDMASLINNPAFITMAASLMQNPQVQQLMSGMMTNAIGGPA 253          
BLAST of CK937258 vs. ExPASy Swiss-Prot
Match: SGTB_HUMAN (Small glutamine-rich tetratricopeptide repeat-containing protein beta OS=Homo sapiens GN=SGTB PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 9.307e-13
Identity = 48/174 (27.59%), Postives = 86/174 (49.43%), Query Frame = 3
Query:   96 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGGSRFTNLIKECEERIAEETGELQKQPLETGPTNVVST--NN---VQPATNISSTEDVETVMDVSNEAAMAAPA 602
            A  L+ +      ++ +  A D Y+QAIE+ PN+A  + +RA A  KL ++T+A+ D  +AI ++   SKAY R   A   L ++E A  + +K   L P    + + +K  E+++ E +      P  TG +  +++  NN   +  A ++     V+ +M      A+  PA
Sbjct:   85 ADQLKDEGNNHMKEENYAAAVDCYTQAIELDPNNAVYYCNRAAAQSKLGHYTDAIKDCEKAIAIDSKYSKAYGRMGLALTALNKFEEAVTSYQKALDLDPENDSYKSNLKIAEQKLREVS-----SPTGTGLSFDMASLINNPAFISMAASLMQNPQVQQLMSGMMTNAIGGPA 253          
BLAST of CK937258 vs. ExPASy Swiss-Prot
Match: SGTB_MOUSE (Small glutamine-rich tetratricopeptide repeat-containing protein beta OS=Mus musculus GN=Sgtb PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.216e-12
Identity = 47/174 (27.01%), Postives = 86/174 (49.43%), Query Frame = 3
Query:   96 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGGSRFTNLIKECEERIAEETGELQKQPLETGPTNVVST--NN---VQPATNISSTEDVETVMDVSNEAAMAAPA 602
            A  L+ +      ++ +  A D Y+QAIE+ PN+A  + +RA A  KL ++T+A+ D  +AI ++   SKAY R   A   + ++E A  + +K   L P    + + +K  E+++ E +      P  TG +  +++  NN   +  A ++     V+ +M      A+  PA
Sbjct:   85 ADQLKDEGNNHMKEENYAAAVDCYTQAIELDPNNAVYYCNRAAAQSKLSHYTDAIKDCEKAIAIDSKYSKAYGRMGLALTAMNKFEEAVTSYQKALDLDPENDSYKSNLKIAEQKLREVS-----SPTGTGLSFDMASLINNPAFITMAASLMQNPQVQQLMSGMMTNAIGGPA 253          
BLAST of CK937258 vs. ExPASy Swiss-Prot
Match: PPT1_SCHPO (Serine/threonine-protein phosphatase T OS=Schizosaccharomyces pombe GN=ppt1 PE=2 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 3.537e-12
Identity = 37/116 (31.90%), Postives = 71/116 (61.21%), Query Frame = 3
Query:   96 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGGSRFTNLIKECEERI 443
            A +L+ +A +   + +   A DLY++AIE+   +A L+++R+ A +K +++  A+ DA++AIE +P  +KAY+R+ATA + + + + A     K  +LAP        ++ECE+ +
Sbjct:    5 ALELKNEANKFLKEGHIVQAIDLYTKAIELDSTNAILYSNRSLAHLKSEDYGLAINDASKAIECDPEYAKAYFRRATAHIAIFQPKEAVGDFRKALALAPSDPAARKKLRECEQLV 120          
The following BLAST results are available for this feature:
BLAST of CK937258 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 14
Match NameE-valueIdentityDescription
SUGT1_DICDI1.808e-2428.20Protein SUGT1 homolog OS=Dictyostelium discoideum ... [more]
SUGT1_BOVIN6.019e-2026.72Suppressor of G2 allele of SKP1 homolog OS=Bos tau... [more]
SUGT1_MOUSE9.609e-1825.21Suppressor of G2 allele of SKP1 homolog OS=Mus mus... [more]
SUGT1_HUMAN4.769e-1726.78Suppressor of G2 allele of SKP1 homolog OS=Homo sa... [more]
PPP5_SOLLC1.299e-1435.34Serine/threonine-protein phosphatase 5 OS=Solanum ... [more]
PPP5_ARATH1.099e-1333.62Serine/threonine-protein phosphatase 5 OS=Arabidop... [more]
SGTB_RAT4.178e-1327.59Small glutamine-rich tetratricopeptide repeat-cont... [more]
SGTB_HUMAN9.307e-1327.59Small glutamine-rich tetratricopeptide repeat-cont... [more]
SGTB_MOUSE1.216e-1227.01Small glutamine-rich tetratricopeptide repeat-cont... [more]
PPT1_SCHPO3.537e-1231.90Serine/threonine-protein phosphatase T OS=Schizosa... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004512_C03 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone F80DAB0003_IIIF_C03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK937258 ID=CK937258; Name=CK937258; organism=Citrus sinensis; type=EST; length=836bp
GGGATATCTTTCTCACCGGAAGTTCATAGACTCTCACTCGCAAGTTGTTC
TCTTTCTTTCTGGACTCTTCGATTAGCCAACTGTAGTCTCTAATGGCAAC
CGATCTGGAGAAGAAAGCCAAAGAGGCGTTCATCGACGACTACTTCGAGC
TCGCCTACGATCTCTACTCGCAAGCCATTGAGATTAGCCCTAATAGCGCT
GAGCTCTTCGCCGACCGCGCTCAAGCCAGCATCAAACTCCAAAATTTCAC
TGAGGCTGTTGCGGATGCGAACCGAGCAATTGAGTTGGAGCCTTCAATGT
CTAAAGCCTATTGGCGTAAAGCCACCGCTTGCATGAAGCTTGAAGAATAT
GAAACGGCTAAGGTGGCACTAGAAAAAGGTGCTTCTCTAGCTCCAGGAGG
TTCGAGATTTACCAACTTAATCAAAGAATGTGAGGAGCGCATAGCAGAGG
AAACTGGTGAGTTACAAAAGCAGCCTTTGGAAACAGGCCCAACAAATGTT
GTGTCAACTAACAACGTCCAGCCTGCGACGAACATTTCCTCAACTGAGGA
TGTTGAGACAGTGATGGATGTTTCCAATGAGGCTGCGATGGCTGCACCAG
CCAGACCAAAATACAGGCATGAATTTTACCAGAAGCCTGAGGAAGTAGTT
GTTACTGTGTTTGCAAAGGGCATACCTGCCAAAAATGTTACAGTTGACTT
TGGGGAACAAATACTAAGTGTTAGTATTGATGTTCCTGGTGAAGAGGCAT
ATCATTTTCAACCTCGCTTATTTGGAAAGATAATACCTGCCCAATGCAGA
TATGAAGTCCTCTCAACCAAAGTTGAAATCCGCCTT
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