CN187169

Overview
NameCN187169
Unique NameCN187169
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length817
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN187169 vs. ExPASy Swiss-Prot
Match: CCD94_DICDI (Coiled-coil domain-containing protein 94 homolog OS=Dictyostelium discoideum GN=ccdc94 PE=3 SV=1)

HSP 1 Score: 219.935 bits (559), Expect = 1.321e-56
Identity = 107/205 (52.20%), Postives = 144/205 (70.24%), Query Frame = 1
Query:   91 MGERKVLNKYYPPDFDPSKLPRIRRPKNQQIKVRMMLPMSIRCNTCGNYIYKGTKFNSRKEDAIGETYLGIQIFRFYFKCTKCSAELTIKTDPQNSDYIVESGASRNYEPWRAEDEAVDEEKKRRDAEEMGDAMKALENRTLDSKREMDILAALDEMKSMKSRHASVSVDAMLEALQSTAPXXXXXXXXXXXALIRSIFQKPREV 705
            MGERKV++KYYPPDFDPSK+ +I+  +    KV  MLPMSIRCNTCG YI +GTKFN++KE    E YLGI+I+RF+ +C KC+AELTIKTDP+NS+Y+ ESGA+RNYEPW+  DE     +  ++ EE  DAM ALENRTL+SKREM++L AL+E+KS+ SR++ +  + +LE                   L++SIF    ++
Sbjct:    1 MGERKVISKYYPPDFDPSKVAKIKVKRPTFTKVTTMLPMSIRCNTCGEYIGRGTKFNAKKETVQNEDYLGIKIYRFFLRCKKCAAELTIKTDPKNSEYVCESGATRNYEPWKETDEE-KSNRMTKEQEEEQDAMIALENRTLESKREMEMLDALEEIKSLNSRNSEIDTEQLLEYNLQKQELEEKLQDEEDDLLVKSIFNNKNKL 204          
BLAST of CN187169 vs. ExPASy Swiss-Prot
Match: CCD94_MOUSE (Coiled-coil domain-containing protein 94 OS=Mus musculus GN=Ccdc94 PE=1 SV=1)

HSP 1 Score: 212.616 bits (540), Expect = 2.109e-54
Identity = 97/173 (56.07%), Postives = 127/173 (73.41%), Query Frame = 1
Query:   91 MGERKVLNKYYPPDFDPSKLPRIRRPKNQQIKVRMMLPMSIRCNTCGNYIYKGTKFNSRKEDAIGETYLGIQIFRFYFKCTKCSAELTIKTDPQNSDYIVESGASRNYEPWRAEDEAVDEEKKRRDAEEMGDAMKALENRTLDSKREMDILAALDEMKSMKSRHASVSVDAML 609
            M ERKVLNKYYPPDFDPSK+P+++ PK++Q  VR+M P ++RC TCG YIYKG KFN+RKE    E YLG+ IFRFY KCT+C AE+T KTDP+N+DY +E GA+RN++  +  +E     +K R+ EE+ + MK LENRT DSK EM++L  L E+K +  R A V  +AML
Sbjct:    1 MSERKVLNKYYPPDFDPSKIPKLKLPKDRQYVVRLMAPFNMRCKTCGEYIYKGKKFNARKETVQNEAYLGLPIFRFYIKCTRCLAEITFKTDPENTDYTMEHGATRNFQAEKLLEEEEKRVQKEREDEELNNPMKVLENRTKDSKLEMEVLENLQELKDLNQRQAHVDFEAML 173          
BLAST of CN187169 vs. ExPASy Swiss-Prot
Match: CCD94_HUMAN (Coiled-coil domain-containing protein 94 OS=Homo sapiens GN=CCDC94 PE=1 SV=1)

HSP 1 Score: 212.616 bits (540), Expect = 2.109e-54
Identity = 97/173 (56.07%), Postives = 127/173 (73.41%), Query Frame = 1
Query:   91 MGERKVLNKYYPPDFDPSKLPRIRRPKNQQIKVRMMLPMSIRCNTCGNYIYKGTKFNSRKEDAIGETYLGIQIFRFYFKCTKCSAELTIKTDPQNSDYIVESGASRNYEPWRAEDEAVDEEKKRRDAEEMGDAMKALENRTLDSKREMDILAALDEMKSMKSRHASVSVDAML 609
            M ERKVLNKYYPPDFDPSK+P+++ PK++Q  VR+M P ++RC TCG YIYKG KFN+RKE    E YLG+ IFRFY KCT+C AE+T KTDP+N+DY +E GA+RN++  +  +E     +K R+ EE+ + MK LENRT DSK EM++L  L E+K +  R A V  +AML
Sbjct:    1 MSERKVLNKYYPPDFDPSKIPKLKLPKDRQYVVRLMAPFNMRCKTCGEYIYKGKKFNARKETVQNEVYLGLPIFRFYIKCTRCLAEITFKTDPENTDYTMEHGATRNFQAEKLLEEEEKRVQKEREDEELNNPMKVLENRTKDSKLEMEVLENLQELKDLNQRQAHVDFEAML 173          
BLAST of CN187169 vs. ExPASy Swiss-Prot
Match: CWF16_SCHPO (Cell cycle control protein cwf16 OS=Schizosaccharomyces pombe GN=cwf16 PE=1 SV=2)

HSP 1 Score: 182.956 bits (463), Expect = 1.790e-45
Identity = 93/188 (49.47%), Postives = 125/188 (66.49%), Query Frame = 1
Query:   91 MGERKVLNKYYPPDFDPSKLP-----RIRRPKNQQIKVRMMLPMSIRCNTCGNYIYKGTKFNSRKEDAIGETYLGIQIFRFYFKCTKCSAELTIKTDPQNSDYIVESGASRNYEPW---RAEDEAVDEEKKRRDAEEMGDAMKALENRTLDSKREMDILAALDEMKSMKSRHASVSVDAMLEALQSTA 630
            M ERKVLNKY PPD+DPS  P     + + P   ++ VR+M P S+RC+TCG YIYKG KFN+RKE   GE Y  I I RFY +CT+C+AE+T  TDP+++DY  ESGASRNYEPW   R ++   +E  +R D  E  D M+ LE +TLD+KR+M I  ALDE++   +R + V++D  +  L+  A
Sbjct:    1 MSERKVLNKYIPPDYDPSIRPPKKKKKFQGPNGGKLTVRLMTPFSMRCHTCGEYIYKGKKFNARKEKT-GEKYFSIDILRFYIRCTRCAAEITFITDPKHADYAAESGASRNYEPWHEKRLQEYEENELAERNDIPE-EDEMEKLEQKTLDTKRQMQISDALDELREKSARRSRVNIDDAIALLKEDA 186          
BLAST of CN187169 vs. ExPASy Swiss-Prot
Match: CWC16_YEAST (Protein CWC16 OS=Saccharomyces cerevisiae GN=YJU2 PE=1 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 3.879e-24
Identity = 67/198 (33.84%), Postives = 106/198 (53.54%), Query Frame = 1
Query:   91 MGERKVLNKYYPPDFDPSKLPRIRRPKNQQIK--------VRMMLPMSIRCNTCGNYIYKGTKFNSRKEDAIGETYL-GIQIFRFYFKCTKCSAELTIKTDPQNSDYIVESGASRNYEPWRAED--------EAVDE-------EKKRRDAEEMG------DAMKALENRTLDSKREMDILAALDEMKSMKSRHASVS 594
            M ERK +NKYYPPD++P +  ++ R   +++K        +R+M P S+RC  C  YI K  KFN +KE  + E YL  I+I+R    C +C+  +  +TDP NSDY++E G  RNY P +  D        E++DE       EK+    E+MG      D M  LE R    ++E +     +E+++++ ++  +S
Sbjct:    1 MSERKAINKYYPPDYNPLEAEKLSRKMAKKLKTMNKSHASIRLMTPFSMRCLECNEYIPKSRKFNGKKE-LLKEKYLDSIKIYRLTISCPRCANSIAFRTDPGNSDYVMEVGGVRNYVPQKPNDDLNAKTAVESIDETLQRLVREKEMEQNEKMGIKEQADDKMDLLEKRLAKIQQEQE---DDEELENLRKKNLEMS 194          
BLAST of CN187169 vs. ExPASy Swiss-Prot
Match: CC130_BOVIN (Coiled-coil domain-containing protein 130 OS=Bos taurus GN=CCDC130 PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 4.439e-20
Identity = 61/177 (34.46%), Postives = 91/177 (51.41%), Query Frame = 1
Query:   91 MGERKVLNKYYPPDFDPSKLPRIRRPKNQQ-------------IKVRMMLPMSIRCNTCGNYIYKGTKFNSRKEDAIGETYLGIQIFRFYFKCTKCSAELTIKTDPQNSDYIVESGASRNYEPWRAED--EAVDEEKKRRDAEEMGDAMKALENRTLDS---KREMDILAALDEMKS 567
            MGERK +NKYYPPDF+P K   + R  N               + +R  +P +I C+ C N+I  G ++N+ K+      Y    I+RF  KC  C   + ++TDP N DY++ SGA R  E W  ED  + +  E +++   EM DAM  LE+   D    K+ +  L+ + E +S
Sbjct:    1 MGERKGVNKYYPPDFNPEKHGSLNRYHNSHPLRERARKLSQGILIIRFEMPYNIWCDGCKNHIGMGVRYNAEKKKV--GNYYTTPIYRFRMKCHLCVNYIEMQTDPANCDYVIVSGAQRKEERWDMEDNEQVLTTEHEKKQKLEM-DAMFRLEHGEADRSTLKKALPTLSHIQEAQS 174          
BLAST of CN187169 vs. ExPASy Swiss-Prot
Match: CC130_MOUSE (Coiled-coil domain-containing protein 130 OS=Mus musculus GN=Ccdc130 PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 7.571e-20
Identity = 67/202 (33.17%), Postives = 97/202 (48.02%), Query Frame = 1
Query:   91 MGERKVLNKYYPPDFDPSKLPRIRRPKNQQ-------------IKVRMMLPMSIRCNTCGNYIYKGTKFNSRKEDAIGETYLGIQIFRFYFKCTKCSAELTIKTDPQNSDYIVESGASRNYEPWRAED--EAVDEEKKRRDAEEMGDAMKALENRTLDS---KREMDILAALDE----------MKSMKSRHASVSVDAMLE 612
            MGERK  NKYYPPDF+P K   + R  N               + +R  +P +I C+ C N+I  G ++N+ K+      Y    I+RF  KC  C   + ++TDP N DY++ SGASR  E W  ED  + +  E ++++  E  DAM  LE+   D    K+ +  L+ + E          + SM  RH      AM E
Sbjct:    1 MGERKGQNKYYPPDFNPEKHGSLNRYHNSHPLRERARKLSQGILVIRFEMPYNIWCDGCKNHIGMGVRYNAEKKKV--GNYYTTPIYRFRMKCHLCVNYIEMQTDPANCDYVIVSGASRKEERWDMEDNEQVLTTEHEKKEKLET-DAMFRLEHGEADRSTLKKALPTLSHIQEAQNAWKDDFALNSMLRRHFREKKKAMQE 199          
BLAST of CN187169 vs. ExPASy Swiss-Prot
Match: CC130_RAT (Coiled-coil domain-containing protein 130 OS=Rattus norvegicus GN=Ccdc130 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 9.888e-20
Identity = 67/202 (33.17%), Postives = 97/202 (48.02%), Query Frame = 1
Query:   91 MGERKVLNKYYPPDFDPSKLPRIRRPKNQQ-------------IKVRMMLPMSIRCNTCGNYIYKGTKFNSRKEDAIGETYLGIQIFRFYFKCTKCSAELTIKTDPQNSDYIVESGASRNYEPWRAED--EAVDEEKKRRDAEEMGDAMKALENRTLDS---KREMDILAALDE----------MKSMKSRHASVSVDAMLE 612
            MGERK  NKYYPPDF+P K   + R  N               + +R  +P +I C+ C N+I  G ++N+ K+      Y    I+RF  KC  C   + ++TDP N DY++ SGASR  E W  ED  + +  E ++++  E  DAM  LE+   D    K+ +  L+ + E          + SM  RH      AM E
Sbjct:    1 MGERKGQNKYYPPDFNPEKHGSLNRYHNSHPLRERARKLSQGILIIRFEMPYNIWCDGCKNHIGMGVRYNAEKKKV--GNYYTTPIYRFRMKCHLCVNYIEMQTDPANCDYVIVSGASRKEERWDMEDNEQVLTTEHEKKEKLET-DAMFRLEHGEADRSTLKKALPTLSHIQEAQNAWKDDFALNSMLRRHFREKKKAMQE 199          
BLAST of CN187169 vs. ExPASy Swiss-Prot
Match: CC130_HUMAN (Coiled-coil domain-containing protein 130 OS=Homo sapiens GN=CCDC130 PE=1 SV=2)

HSP 1 Score: 95.5153 bits (236), Expect = 3.758e-19
Identity = 62/178 (34.83%), Postives = 92/178 (51.69%), Query Frame = 1
Query:   91 MGERKVLNKYYPPDFDPSKLPRIRRPKNQQ-------------IKVRMMLPMSIRCNTCGNYIYKGTKFNSRKEDAIGETYLGIQIFRFYFKCTKCSAELTIKTDPQNSDYIVESGASRNYEPW-RAEDEAV--DEEKKRRDAEEMGDAMKALENRTLDS---KREMDILAALDEMKS 567
            MGERK +NKYYPPDF+P K   + R  N               + +R  +P +I C+ C N+I  G ++N+ K+      Y    I+RF  KC  C   + ++TDP N DY++ SGA R  E W  A++E V   E +K++  E   DAM  LE+   D    K+ +  L+ + E +S
Sbjct:    1 MGERKGVNKYYPPDFNPEKHGSLNRYHNSHPLRERARKLSQGILIIRFEMPYNIWCDGCKNHIGMGVRYNAEKKKV--GNYYTTPIYRFRMKCHLCVNYIEMQTDPANCDYVIVSGAQRKEERWDMADNEQVLTTEHEKKQKLET--DAMFRLEHGEADRSTLKKALPTLSHIQEAQS 174          
BLAST of CN187169 vs. ExPASy Swiss-Prot
Match: CC130_DROME (Coiled-coil domain-containing protein 130 homolog OS=Drosophila melanogaster GN=CG15084 PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 4.908e-19
Identity = 59/170 (34.71%), Postives = 81/170 (47.65%), Query Frame = 1
Query:   91 MGERKVLNKYYPPDFDPSK------------LPRIRRPKNQQIKVRMMLPMSIRCNTCGNYIYKGTKFNSRKEDAIGETYLGIQIFRFYFKCTKCSAELTIKTDPQNSDYIVESGASRNYEPW-RAEDEAVDEEKKRRDAEEMGDAMKALENRTLDSKREMDILAALDEM 561
            MGERK  NKYYPPD+DP K              R R+     I +R  +P +I C+ C N+I  G ++N+ K       Y    +F+F  KC  C     I+TDP N DY++ SGA R    W   ++E V  E K        DAM  LE++  D+K   D    L ++
Sbjct:    1 MGERKGQNKYYPPDYDPKKGGLNKFQGTHALRERARKIHLGIIIIRFEMPYNIWCDGCKNHIGMGVRYNAEKTKV--GMYYTTPVFKFRMKCHLCDNHFEIQTDPGNLDYVILSGARRQENRWDPLQNEQVVPETKEVQKRLFDDAMYKLEHQAKDAKAGADARPVLQKL 168          
The following BLAST results are available for this feature:
BLAST of CN187169 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 14
Match NameE-valueIdentityDescription
CCD94_DICDI1.321e-5652.20Coiled-coil domain-containing protein 94 homolog O... [more]
CCD94_MOUSE2.109e-5456.07Coiled-coil domain-containing protein 94 OS=Mus mu... [more]
CCD94_HUMAN2.109e-5456.07Coiled-coil domain-containing protein 94 OS=Homo s... [more]
CWF16_SCHPO1.790e-4549.47Cell cycle control protein cwf16 OS=Schizosaccharo... [more]
CWC16_YEAST3.879e-2433.84Protein CWC16 OS=Saccharomyces cerevisiae GN=YJU2 ... [more]
CC130_BOVIN4.439e-2034.46Coiled-coil domain-containing protein 130 OS=Bos t... [more]
CC130_MOUSE7.571e-2033.17Coiled-coil domain-containing protein 130 OS=Mus m... [more]
CC130_RAT9.888e-2033.17Coiled-coil domain-containing protein 130 OS=Rattu... [more]
CC130_HUMAN3.758e-1934.83Coiled-coil domain-containing protein 130 OS=Homo ... [more]
CC130_DROME4.908e-1934.71Coiled-coil domain-containing protein 130 homolog ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0004A18_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0004A18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN187169 ID=CN187169; Name=CN187169; organism=Citrus sinensis; type=EST; length=817bp
AGGCTTGGAAGAGCCTTTTCTGTGTTCGTTCTCTCTGTTCAGTTCTGGAT
ATTGCATTCTGACTTTTTATTAAGTTAGAAGGAGGAGAAAATGGGAGAAA
GAAAAGTACTCAACAAGTATTATCCACCGGATTTCGACCCATCAAAACTT
CCCAGGATCCGACGACCAAAGAACCAGCAGATTAAGGTTCGGATGATGTT
GCCCATGAGTATCCGATGCAACACATGTGGCAATTACATCTACAAAGGGA
CAAAATTTAATTCTCGCAAAGAAGACGCCATTGGCGAGACATATCTCGGA
ATTCAAATATTCAGGTTCTATTTCAAATGCACAAAGTGCTCAGCTGAGCT
GACAATAAAAACAGATCCTCAAAATTCAGATTATATAGTGGAGTCTGGTG
CATCTCGTAATTATGAACCTTGGCGCGCAGAGGATGAGGCAGTAGACGAG
GAGAAAAAGAGGAGAGATGCTGAAGAGATGGGGGATGCTATGAAAGCTTT
GGAGAATAGAACCTTGGATTCCAAAAGGGAGATGGACATCCTTGCAGCAC
TTGATGAGATGAAGTCTATGAAGTCTAGACATGCAAGTGTTAGTGTAGAT
GCTATGCTTGAGGCCTTGCAGAGCACAGCTCCGGAAAAGGAGAAGAGGCT
AGAAGAAGAGGATGAAGCACTTATTAGATCAATATTCCAGAAACCAAGAG
AAGTTGTTCGAAGGATTTCTGATGAAGATCTCGATGATGATGGTGATTTG
TTTCAATTTTCTAGTGAAAGAAATGAAGGCTCAAGCAATAATTTGAAGAA
AAAAAGCTATCTGAAGA
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