CK937249
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK937249 vs. ExPASy Swiss-Prot
Match: EF1B_ORYSJ (Elongation factor 1-beta OS=Oryza sativa subsp. japonica GN=Os07g0662500 PE=1 SV=3) HSP 1 Score: 162.155 bits (409), Expect = 3.649e-39 Identity = 79/87 (90.80%), Postives = 83/87 (95.40%), Query Frame = 2 Query: 494 VLLDVKPWDDETDMKKLEEAVRSVEMPGLFWGASKLVPVGYGIKKLQIMITIVDDLVSVDSLIEEHLTAEPCNEYIQSCDIVAFNKI 754 VLLDVKPWDDETDMKKLEEAVRSV+M GL WGASKLVPVGYGIKKLQIM+TIVDDLVSVDSLIEEHLT EP NE++QSCDIVAFNKI Sbjct: 138 VLLDVKPWDDETDMKKLEEAVRSVQMEGLTWGASKLVPVGYGIKKLQIMLTIVDDLVSVDSLIEEHLTEEPINEFVQSCDIVAFNKI 224 HSP 2 Score: 115.546 bits (288), Expect = 3.917e-25 Identity = 53/83 (63.86%), Postives = 68/83 (81.93%), Query Frame = 3 Query: 84 MAITFSDLHTESGLKSLDQYLSGKSYISGNQLTKDDIKVYAAVLVKPADSFPNASSWYDSVSSRLAPSFPGKAVGVRVDGKGA 332 MA+TF+DLHT GLK+L+Q+LSGK+Y+SGN ++KDDIKV+AAV KP FPNA+ WYD+V++ LA FPGKAVGV + G GA Sbjct: 1 MAVTFTDLHTADGLKALEQHLSGKTYVSGNAISKDDIKVFAAVPSKPGAEFPNAARWYDTVAAALASRFPGKAVGVNLPGGGA 83
BLAST of CK937249 vs. ExPASy Swiss-Prot
Match: EF1B2_ARATH (Elongation factor 1-beta 2 OS=Arabidopsis thaliana GN=At5g19510 PE=1 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 6.882e-38 Identity = 77/87 (88.51%), Postives = 81/87 (93.10%), Query Frame = 2 Query: 494 VLLDVKPWDDETDMKKLEEAVRSVEMPGLFWGASKLVPVGYGIKKLQIMITIVDDLVSVDSLIEEHLTAEPCNEYIQSCDIVAFNKI 754 VL+DVKPWDDETDMKKLEEAVR VEMPGLFWGASKLVPVGYGIKKL IM TIVDDLVS D+LIE+ LT+EP NEYIQSCDIVAFNKI Sbjct: 138 VLMDVKPWDDETDMKKLEEAVRGVEMPGLFWGASKLVPVGYGIKKLTIMFTIVDDLVSPDNLIEDFLTSEPNNEYIQSCDIVAFNKI 224 HSP 2 Score: 124.79 bits (312), Expect = 6.456e-28 Identity = 57/83 (68.67%), Postives = 74/83 (89.16%), Query Frame = 3 Query: 84 MAITFSDLHTESGLKSLDQYLSGKSYISGNQLTKDDIKVYAAVLVKPADSFPNASSWYDSVSSRLAPSFPGKAVGVRVDGKGA 332 MA+TFSDLHTE G+KS++++L+GK+YISG+QL+ DD+KVYAAV VKP+D+FPNAS WY+SV+S+LA SFPGKAVGV+ G A Sbjct: 1 MAVTFSDLHTEEGVKSVEEHLAGKTYISGDQLSVDDVKVYAAVPVKPSDAFPNASKWYESVASQLAKSFPGKAVGVQFGGSAA 83
BLAST of CK937249 vs. ExPASy Swiss-Prot
Match: EF1D2_ARATH (Elongation factor 1-delta 2 OS=Arabidopsis thaliana GN=At2g18110 PE=2 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 1.174e-37 Identity = 73/87 (83.91%), Postives = 81/87 (93.10%), Query Frame = 2 Query: 494 VLLDVKPWDDETDMKKLEEAVRSVEMPGLFWGASKLVPVGYGIKKLQIMITIVDDLVSVDSLIEEHLTAEPCNEYIQSCDIVAFNKI 754 VL+D+KPWDDETDMKKLEEAVRS++M GLFWGASKLVPVGYGIKKL IM TIVDDLVS+D++IEE LT EP NEY+QSCDIVAFNKI Sbjct: 145 VLMDIKPWDDETDMKKLEEAVRSIQMEGLFWGASKLVPVGYGIKKLHIMCTIVDDLVSIDTMIEEQLTVEPINEYVQSCDIVAFNKI 231
BLAST of CK937249 vs. ExPASy Swiss-Prot
Match: EF1D1_ARATH (Elongation factor 1-delta 1 OS=Arabidopsis thaliana GN=At1g30230 PE=2 SV=2) HSP 1 Score: 156.762 bits (395), Expect = 1.533e-37 Identity = 72/87 (82.76%), Postives = 82/87 (94.25%), Query Frame = 2 Query: 494 VLLDVKPWDDETDMKKLEEAVRSVEMPGLFWGASKLVPVGYGIKKLQIMITIVDDLVSVDSLIEEHLTAEPCNEYIQSCDIVAFNKI 754 VL+D+KPWDDETDMKKLEEAV+S++M GLFWGASKLVPVGYGIKKLQI+ TIVDDLVS+D++IEE LT EP NEY+QSCDIVAFNKI Sbjct: 145 VLIDIKPWDDETDMKKLEEAVKSIQMEGLFWGASKLVPVGYGIKKLQILCTIVDDLVSIDTMIEEQLTVEPINEYVQSCDIVAFNKI 231
BLAST of CK937249 vs. ExPASy Swiss-Prot
Match: EF1B1_ARATH (Elongation factor 1-beta 1 OS=Arabidopsis thaliana GN=At5g12110 PE=2 SV=2) HSP 1 Score: 156.762 bits (395), Expect = 1.533e-37 Identity = 77/87 (88.51%), Postives = 83/87 (95.40%), Query Frame = 2 Query: 494 VLLDVKPWDDETDMKKLEEAVRSVEMPGLFWGASKLVPVGYGIKKLQIMITIVDDLVSVDSLIEEHLTAEPCNEYIQSCDIVAFNKI 754 VLL+VKPWDDETDMKKLEEAVRSV+MPGL WGASKLVPVGYGIKKL IM+TIVDDLVSVD+LIE+HLT+EP NEYIQS DIVAFNKI Sbjct: 142 VLLEVKPWDDETDMKKLEEAVRSVQMPGLTWGASKLVPVGYGIKKLTIMMTIVDDLVSVDNLIEDHLTSEPNNEYIQSVDIVAFNKI 228 HSP 2 Score: 123.635 bits (309), Expect = 1.438e-27 Identity = 58/80 (72.50%), Postives = 69/80 (86.25%), Query Frame = 3 Query: 84 MAITFSDLHTESGLKSLDQYLSGKSYISGNQLTKDDIKVYAAVLVKPADSFPNASSWYDSVSSRLAPSFPGKAVGVRVDG 323 MA+TFSDLHTE GLK+L+++L+GK+YISG+QL+ DD+KVYAAVL P D FPNAS WYDSV+S LA SFPGKA GVRV G Sbjct: 1 MAVTFSDLHTERGLKTLEEHLAGKTYISGDQLSVDDVKVYAAVLENPGDGFPNASKWYDSVASHLAKSFPGKADGVRVGG 80
BLAST of CK937249 vs. ExPASy Swiss-Prot
Match: EF1D_PIMBR (Elongation factor 1-delta OS=Pimpinella brachycarpa PE=2 SV=3) HSP 1 Score: 155.606 bits (392), Expect = 3.415e-37 Identity = 75/87 (86.21%), Postives = 81/87 (93.10%), Query Frame = 2 Query: 494 VLLDVKPWDDETDMKKLEEAVRSVEMPGLFWGASKLVPVGYGIKKLQIMITIVDDLVSVDSLIEEHLTAEPCNEYIQSCDIVAFNKI 754 VLLDVKPWDDETDM KLEEAVRS++M GL WGASKLV VGYGIKKLQIM+TIVDDLVSVD L+E++LTAEP NEYIQSCDIVAFNKI Sbjct: 140 VLLDVKPWDDETDMTKLEEAVRSIKMDGLLWGASKLVAVGYGIKKLQIMLTIVDDLVSVDDLVEDYLTAEPANEYIQSCDIVAFNKI 226 HSP 2 Score: 73.1738 bits (178), Expect = 2.229e-12 Identity = 37/81 (45.68%), Postives = 53/81 (65.43%), Query Frame = 3 Query: 84 MAITFSDLHTESGLKSLDQYLSGKSYISGNQLTKDDIKVYAAVLVKPADSFPNASSWYDSVSSRLAPS-FPGKAVGVRVDG 323 MA+TF DL +E+GL+ LD+YL +SYISG Q +KDD+ V+AA+ P+ + N S WY+ V + L S + GV V+G Sbjct: 1 MAVTFYDLSSEAGLEKLDEYLLSRSYISGYQASKDDLAVHAALAKPPSSKYVNVSRWYNHVEALLRISGVSAEGCGVTVEG 81
BLAST of CK937249 vs. ExPASy Swiss-Prot
Match: EF1D1_ORYSJ (Elongation factor 1-delta 1 OS=Oryza sativa subsp. japonica GN=Os07g0614500 PE=2 SV=3) HSP 1 Score: 153.68 bits (387), Expect = 1.298e-36 Identity = 75/87 (86.21%), Postives = 80/87 (91.95%), Query Frame = 2 Query: 494 VLLDVKPWDDETDMKKLEEAVRSVEMPGLFWGASKLVPVGYGIKKLQIMITIVDDLVSVDSLIEEHLTAEPCNEYIQSCDIVAFNKI 754 VLLDVKPWDDETDM KLEEAVR+V+M GL WGASKLVPVGYGIKKLQIM+TIVDDLVSVDSLIE++ EP NEYIQSCDIVAFNKI Sbjct: 143 VLLDVKPWDDETDMTKLEEAVRNVKMEGLLWGASKLVPVGYGIKKLQIMMTIVDDLVSVDSLIEDYFYTEPANEYIQSCDIVAFNKI 229 HSP 2 Score: 68.5514 bits (166), Expect = 5.491e-11 Identity = 33/82 (40.24%), Postives = 52/82 (63.41%), Query Frame = 3 Query: 84 MAITFSDLHTESGLKSLDQYLSGKSYISGNQLTKDDIKVYAAVLVKPADSFPNASSWYDSVSSRLAPSFPGKAVGVRVDGKG 329 MA++F+++ +E+GLK LD+YL +SYISG Q + DD+ VY+A P+ S+ N + W+ + + L S GV DG+G Sbjct: 1 MAVSFTNVSSEAGLKKLDEYLLTRSYISGYQASNDDLAVYSAFSTAPSSSYTNVARWFTHIDALLRLS------GVTADGQG 76
BLAST of CK937249 vs. ExPASy Swiss-Prot
Match: EF1D2_ORYSJ (Elongation factor 1-delta 2 OS=Oryza sativa subsp. japonica GN=Os03g0406200 PE=2 SV=3) HSP 1 Score: 152.14 bits (383), Expect = 3.776e-36 Identity = 74/87 (85.06%), Postives = 80/87 (91.95%), Query Frame = 2 Query: 494 VLLDVKPWDDETDMKKLEEAVRSVEMPGLFWGASKLVPVGYGIKKLQIMITIVDDLVSVDSLIEEHLTAEPCNEYIQSCDIVAFNKI 754 VLLDVKPWDDETDM KLEEAVR+V+M GL WGASKLVPVGYGIKKLQIM+TIVDDLVSVDSLIE++ EP NE+IQSCDIVAFNKI Sbjct: 140 VLLDVKPWDDETDMAKLEEAVRNVKMEGLLWGASKLVPVGYGIKKLQIMMTIVDDLVSVDSLIEDYFYTEPANEFIQSCDIVAFNKI 226 HSP 2 Score: 71.633 bits (174), Expect = 6.486e-12 Identity = 36/82 (43.90%), Postives = 55/82 (67.07%), Query Frame = 3 Query: 84 MAITFSDLHTESGLKSLDQYLSGKSYISGNQLTKDDIKVYAAVLVKPADSFPNASSWYDSVSSRLAPSFPGKAVGVRVDGKG 329 MAIT S++++E+GL+ LD+YL +SYISG Q +KDD+ V+ ++ PA S+ N + WYD +S+ L S GV +G+G Sbjct: 1 MAITLSNVNSEAGLQKLDEYLLTRSYISGYQASKDDMTVFTSLPSAPAASYVNVTRWYDHISALLRSS------GVTAEGEG 76
BLAST of CK937249 vs. ExPASy Swiss-Prot
Match: EF1D_BETVU (Elongation factor 1-delta OS=Beta vulgaris PE=2 SV=3) HSP 1 Score: 149.828 bits (377), Expect = 1.874e-35 Identity = 74/87 (85.06%), Postives = 80/87 (91.95%), Query Frame = 2 Query: 494 VLLDVKPWDDETDMKKLEEAVRSVEMPGLFWGASKLVPVGYGIKKLQIMITIVDDLVSVDSLIEEHLTAEPCNEYIQSCDIVAFNKI 754 VLLDVKPWDDETDMKKLEEAVRSV+ GL GASKLVPVGYGIKKL IM+TIVDDLVSVD+LIE++LT EP NEY+QSCDIVAFNKI Sbjct: 145 VLLDVKPWDDETDMKKLEEAVRSVQQEGLTLGASKLVPVGYGIKKLTIMMTIVDDLVSVDNLIEDYLTVEPINEYVQSCDIVAFNKI 231 HSP 2 Score: 68.9366 bits (167), Expect = 4.204e-11 Identity = 37/81 (45.68%), Postives = 51/81 (62.96%), Query Frame = 3 Query: 84 MAITFSDLHTESGLKSLDQYLSGKSYISGNQLTKDDIKVYAAVLVKPADSFPNASSWYDSVSSRLAPS-FPGKAVGVRVDG 323 MA+TFSDL + +GL SLD YL +SYI+G Q +KDD+ V++AV S+ N S WY + + L S G+ GV V+G Sbjct: 1 MAVTFSDLSSPAGLDSLDAYLLSRSYITGYQASKDDLTVFSAVPKASLASYVNVSRWYKHIDALLRISGVSGEGSGVTVEG 81
BLAST of CK937249 vs. ExPASy Swiss-Prot
Match: EF1B_WHEAT (Elongation factor 1-beta OS=Triticum aestivum PE=1 SV=2) HSP 1 Score: 138.272 bits (347), Expect = 5.643e-32 Identity = 68/87 (78.16%), Postives = 75/87 (86.21%), Query Frame = 2 Query: 494 VLLDVKPWDDETDMKKLEEAVRSVEMPGLFWGASKLVPVGYGIKKLQIMITIVDDLVSVDSLIEEHLTAEPCNEYIQSCDIVAFNKI 754 VL+D+KPWDDETDMKKLEEAVRSV+M GL WGASKL+PVGYGIKKLQIM+TI+DDL S IEE L P NEY+QSCDIVAFNKI Sbjct: 132 VLMDIKPWDDETDMKKLEEAVRSVQMEGLTWGASKLMPVGYGIKKLQIMLTIIDDLASTP--IEEVLCEAPINEYVQSCDIVAFNKI 216 HSP 2 Score: 102.449 bits (254), Expect = 3.431e-21 Identity = 45/76 (59.21%), Postives = 64/76 (84.21%), Query Frame = 3 Query: 84 MAITFSDLHTESGLKSLDQYLSGKSYISGNQLTKDDIKVYAAVLVKPADSFPNASSWYDSVSSRLAPSFPGKAVGV 311 MA+TFSDLHT GLK+L+ +L+GK+YISG+ +TKDD+KV+AAV +KP+ FPNA+ WYD+V++ ++ FPG+A GV Sbjct: 1 MAVTFSDLHTADGLKALEAHLAGKTYISGDGITKDDVKVFAAVPLKPSAEFPNAARWYDTVAAAVSSRFPGQASGV 76 The following BLAST results are available for this feature:
BLAST of CK937249 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 38
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Sequences
The
following sequences are available for this feature:
EST sequence >CK937249 ID=CK937249; Name=CK937249; organism=Citrus sinensis; type=EST; length=878bpback to top |