CK937243

Overview
NameCK937243
Unique NameCK937243
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length658
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1498 contig Csv1_Contig1498:55..712. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK937243 vs. ExPASy Swiss-Prot
Match: NDK1_ARATH (Nucleoside diphosphate kinase 1 OS=Arabidopsis thaliana GN=NDPK1 PE=1 SV=1)

HSP 1 Score: 258.455 bits (659), Expect = 2.292e-68
Identity = 119/148 (80.41%), Postives = 135/148 (91.22%), Query Frame = 3
Query:   78 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIETGRNIIHGSDSVDSAQKEIALWFPDGPINWQSSLHPWIYE 521
            MEQTFIMIKPDGVQRGL+GE+I RFEKKGF+LKGLKL++V+R FAEKHYEDLSSK FF  L++YI SGPVVAMIWEG+ VV TGR IIGATNPA S PGTIRGD AI+ GRN+IHGSDSV+SA+KEIALWFPDGP+NWQSS+HPW+YE
Sbjct:    1 MEQTFIMIKPDGVQRGLIGEVICRFEKKGFTLKGLKLISVERSFAEKHYEDLSSKSFFSGLVDYIVSGPVVAMIWEGKNVVLTGRKIIGATNPAASEPGTIRGDFAIDIGRNVIHGSDSVESARKEIALWFPDGPVNWQSSVHPWVYE 148          
BLAST of CK937243 vs. ExPASy Swiss-Prot
Match: NDKB_FLABI (Nucleoside diphosphate kinase B OS=Flaveria bidentis PE=2 SV=1)

HSP 1 Score: 254.603 bits (649), Expect = 3.309e-67
Identity = 120/148 (81.08%), Postives = 133/148 (89.86%), Query Frame = 3
Query:   78 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIETGRNIIHGSDSVDSAQKEIALWFPDGPINWQSSLHPWIYE 521
            ME TFIMIKPDGVQRGLVGEII RFEKKGFSLKGLKL+TVD+ FAEKHY DLS+KPFF  L+EYI SGPVVAM+WEG+ VV TGR IIGATNPA+SAPGTIRGD AI+ GRN+IHGSD+V+SA+KEIALWFP+G  NW SSLHPWIYE
Sbjct:    1 MEHTFIMIKPDGVQRGLVGEIIGRFEKKGFSLKGLKLLTVDQAFAEKHYADLSAKPFFNGLVEYIISGPVVAMVWEGKNVVTTGRKIIGATNPAESAPGTIRGDFAIDIGRNVIHGSDAVESAKKEIALWFPEGVANWSSSLHPWIYE 148          
BLAST of CK937243 vs. ExPASy Swiss-Prot
Match: NDK1_TOBAC (Nucleoside diphosphate kinase 1 OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 253.447 bits (646), Expect = 7.372e-67
Identity = 120/148 (81.08%), Postives = 133/148 (89.86%), Query Frame = 3
Query:   78 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIETGRNIIHGSDSVDSAQKEIALWFPDGPINWQSSLHPWIYE 521
            MEQTFIMIKPDGVQRGLVGEII RFEKKGFSLKGLKL+TVDR FAEKHY DLS+KPFF  L++YI SGPVVAM+WEG+GVV TGR IIGATNP +SAPGTIRGD AI+ GRN+IHGSD+V+SA+KEIALWFP+G   WQSSLH WIYE
Sbjct:    1 MEQTFIMIKPDGVQRGLVGEIIGRFEKKGFSLKGLKLITVDRAFAEKHYSDLSAKPFFNGLVDYIISGPVVAMVWEGKGVVTTGRKIIGATNPLESAPGTIRGDYAIDIGRNVIHGSDAVESARKEIALWFPEGVAEWQSSLHSWIYE 148          
BLAST of CK937243 vs. ExPASy Swiss-Prot
Match: NDK1_SPIOL (Nucleoside diphosphate kinase 1 OS=Spinacia oleracea GN=NDPK1 PE=2 SV=1)

HSP 1 Score: 253.447 bits (646), Expect = 7.372e-67
Identity = 119/148 (80.41%), Postives = 130/148 (87.84%), Query Frame = 3
Query:   78 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIETGRNIIHGSDSVDSAQKEIALWFPDGPINWQSSLHPWIYE 521
            MEQTFIMIKPDGVQRGLVGEII RFEKKGFSLK LK + VDRPFAEKHY DLS+KPFF  L+EYI SGPVVAM+WEG+GVV TGR +IGATNP  S PGTIRGD AI+ GRN+IHGSD+VDSA KEIALWFPDG ++WQSSLH WIYE
Sbjct:    1 MEQTFIMIKPDGVQRGLVGEIISRFEKKGFSLKALKFVNVDRPFAEKHYADLSAKPFFNGLVEYIVSGPVVAMVWEGKGVVATGRKLIGATNPLASEPGTIRGDFAIDIGRNVIHGSDAVDSATKEIALWFPDGVVHWQSSLHSWIYE 148          
BLAST of CK937243 vs. ExPASy Swiss-Prot
Match: NDKA_FLABI (Nucleoside diphosphate kinase A OS=Flaveria bidentis PE=2 SV=1)

HSP 1 Score: 253.062 bits (645), Expect = 9.628e-67
Identity = 120/148 (81.08%), Postives = 131/148 (88.51%), Query Frame = 3
Query:   78 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIETGRNIIHGSDSVDSAQKEIALWFPDGPINWQSSLHPWIYE 521
            MEQTFIMIKPDGVQ GLVGEII RFEKKGFSLKGLKL+TVDR FAEKHY DLSSKPFF  L+EYI SGPVVAM+WEG+ VV TGR IIGATNPA+SAPGTIRGD AI+ GRN+IHGSD+V+SA+K I LWFP+G  NW SSLHPWIYE
Sbjct:    1 MEQTFIMIKPDGVQSGLVGEIIGRFEKKGFSLKGLKLLTVDRAFAEKHYADLSSKPFFNGLVEYIVSGPVVAMVWEGKNVVTTGREIIGATNPAESAPGTIRGDFAIDIGRNVIHGSDAVESARKVIGLWFPEGVANWSSSLHPWIYE 148          
BLAST of CK937243 vs. ExPASy Swiss-Prot
Match: NDK1_MESCR (Nucleoside diphosphate kinase 1 OS=Mesembryanthemum crystallinum GN=NDKP1 PE=2 SV=1)

HSP 1 Score: 252.677 bits (644), Expect = 1.257e-66
Identity = 119/148 (80.41%), Postives = 130/148 (87.84%), Query Frame = 3
Query:   78 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIETGRNIIHGSDSVDSAQKEIALWFPDGPINWQSSLHPWIYE 521
            MEQTFIMIKPDGVQRGLVGEII RFEKKGFSLK LK + VDRPFAEKHY DLS+KPFF  L+EYI SGPVVAM+WEG+GVV TGR IIGATNP  S PGTIRGD AI+ GRN+IHGSD+V+SA KEIALWFP+G +NWQSSLH WIYE
Sbjct:    1 MEQTFIMIKPDGVQRGLVGEIISRFEKKGFSLKALKFINVDRPFAEKHYADLSAKPFFNGLVEYIVSGPVVAMVWEGKGVVLTGRKIIGATNPLASEPGTIRGDFAIDIGRNVIHGSDAVESATKEIALWFPEGVVNWQSSLHSWIYE 148          
BLAST of CK937243 vs. ExPASy Swiss-Prot
Match: NDK_HELAN (Nucleoside diphosphate kinase OS=Helianthus annuus PE=2 SV=1)

HSP 1 Score: 251.906 bits (642), Expect = 2.145e-66
Identity = 118/148 (79.73%), Postives = 132/148 (89.19%), Query Frame = 3
Query:   78 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIETGRNIIHGSDSVDSAQKEIALWFPDGPINWQSSLHPWIYE 521
            MEQTFIMIKPDGVQRGLVGEII RFEKKGF+LKGLKL+TVD+ FAEKHY DLS+KPFF  L+EYI SGPVVAM+WEG+ VV TGR IIGATNPA+S PGTIRGD AI+ GRN+IHGSD+V+SA+KEI LWFP+G  NW SSLHPWIYE
Sbjct:    1 MEQTFIMIKPDGVQRGLVGEIIGRFEKKGFTLKGLKLLTVDQAFAEKHYADLSAKPFFNGLVEYIISGPVVAMVWEGKNVVTTGRKIIGATNPAESPPGTIRGDFAIDIGRNVIHGSDAVESAKKEIGLWFPEGVANWSSSLHPWIYE 148          
BLAST of CK937243 vs. ExPASy Swiss-Prot
Match: NDK_CAPAN (Nucleoside diphosphate kinase OS=Capsicum annuum PE=2 SV=1)

HSP 1 Score: 251.521 bits (641), Expect = 2.801e-66
Identity = 119/148 (80.41%), Postives = 133/148 (89.86%), Query Frame = 3
Query:   78 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIETGRNIIHGSDSVDSAQKEIALWFPDGPINWQSSLHPWIYE 521
            MEQTFIMIKPDGVQRGLVGEII RFEKKGFSLKGLKL+TVDR FAEKHY DLS+KPFF  L+EYI SGPVV+M+WEG+GV+ TGR IIGATNP +SAPGTIRGD AI+ GRN+IHGSD+V+SA+KEIALWFP+G   WQSSLH WIYE
Sbjct:    1 MEQTFIMIKPDGVQRGLVGEIIGRFEKKGFSLKGLKLITVDRAFAEKHYADLSAKPFFNGLVEYIVSGPVVSMVWEGKGVLTTGRKIIGATNPLESAPGTIRGDYAIDIGRNVIHGSDAVESARKEIALWFPEGVAEWQSSLHCWIYE 148          
BLAST of CK937243 vs. ExPASy Swiss-Prot
Match: NDK1_SOYBN (Nucleoside diphosphate kinase 1 OS=Glycine max PE=2 SV=1)

HSP 1 Score: 249.98 bits (637), Expect = 8.150e-66
Identity = 119/147 (80.95%), Postives = 130/147 (88.44%), Query Frame = 3
Query:   81 EQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIETGRNIIHGSDSVDSAQKEIALWFPDGPINWQSSLHPWIYE 521
            EQTFIMIKPDGVQRGL+GEII RFEKKGF LKGLKL+TVDRPFAEKHY DLS+KPFF  L++YI SGPVVAMIWEG+ VV TGR IIGATNPAQS PGTIRGD AI+ GRN+IHGSD+V+SA KEIALWFP+GP N QSS H WIYE
Sbjct:    3 EQTFIMIKPDGVQRGLIGEIISRFEKKGFYLKGLKLVTVDRPFAEKHYADLSAKPFFSGLVDYIISGPVVAMIWEGKNVVTTGRKIIGATNPAQSEPGTIRGDFAIDIGRNVIHGSDAVESANKEIALWFPEGPANCQSSQHSWIYE 149          
BLAST of CK937243 vs. ExPASy Swiss-Prot
Match: NDK1_PEA (Nucleoside diphosphate kinase 1 OS=Pisum sativum GN=NDPK1 PE=2 SV=1)

HSP 1 Score: 245.358 bits (625), Expect = 2.007e-64
Identity = 116/147 (78.91%), Postives = 128/147 (87.07%), Query Frame = 3
Query:   81 EQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIETGRNIIHGSDSVDSAQKEIALWFPDGPINWQSSLHPWIYE 521
            EQTFIMIKPDGVQRGLVGEII RFEKKGF LKGLK + V+R FAEKHY DLS+KPFF  L++YI SGPVVAMIWEG+ VV TGR IIGATNPAQS PGTIRGD AI+ GRN+IHGSD+V+SA KEIALWFP+G  NW+SSLH WIYE
Sbjct:    3 EQTFIMIKPDGVQRGLVGEIISRFEKKGFYLKGLKFVNVERAFAEKHYADLSAKPFFSGLVDYIISGPVVAMIWEGKNVVTTGRKIIGATNPAQSEPGTIRGDFAIDIGRNVIHGSDAVESANKEIALWFPEGAANWESSLHSWIYE 149          
The following BLAST results are available for this feature:
BLAST of CK937243 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
NDK1_ARATH2.292e-6880.41Nucleoside diphosphate kinase 1 OS=Arabidopsis tha... [more]
NDKB_FLABI3.309e-6781.08Nucleoside diphosphate kinase B OS=Flaveria bident... [more]
NDK1_TOBAC7.372e-6781.08Nucleoside diphosphate kinase 1 OS=Nicotiana tabac... [more]
NDK1_SPIOL7.372e-6780.41Nucleoside diphosphate kinase 1 OS=Spinacia olerac... [more]
NDKA_FLABI9.628e-6781.08Nucleoside diphosphate kinase A OS=Flaveria bident... [more]
NDK1_MESCR1.257e-6680.41Nucleoside diphosphate kinase 1 OS=Mesembryanthemu... [more]
NDK_HELAN2.145e-6679.73Nucleoside diphosphate kinase OS=Helianthus annuus... [more]
NDK_CAPAN2.801e-6680.41Nucleoside diphosphate kinase OS=Capsicum annuum P... [more]
NDK1_SOYBN8.150e-6680.95Nucleoside diphosphate kinase 1 OS=Glycine max PE=... [more]
NDK1_PEA2.007e-6478.91Nucleoside diphosphate kinase 1 OS=Pisum sativum G... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004512_E02 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone F80DAB0003_IIIF_E02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK937243 ID=CK937243; Name=CK937243; organism=Citrus sinensis; type=EST; length=658bp
AGCTCATTCTCTCGCATGTGTGCTGTGCTATTTCACTCAATTCTCAAAAC
AAGTTGGTTTCTCTGAATCTCAAAGAAATGGAACAAACTTTCATCATGAT
CAAGCCCGATGGGGTCCAAAGGGGCCTTGTTGGTGAAATCATCATCAGAT
TTGAGAAGAAGGGTTTCTCCTTGAAGGGTTTGAAGCTTATGACTGTGGAC
CGCCCTTTTGCTGAGAAGCACTATGAGGATTTGTCATCGAAGCCTTTCTT
TGGTTCTCTGATTGAGTACATTACCTCTGGTCCTGTTGTTGCTATGATTT
GGGAGGGTGAAGGTGTTGTTAAGACTGGCCGCACTATTATTGGAGCCACC
AACCCTGCGCAGTCTGCTCCTGGAACCATCCGAGGTGATTTGGCTATCGA
GACGGGCAGGAATATCATCCATGGAAGTGACTCAGTTGACAGTGCCCAGA
AAGAAATCGCCTTGTGGTTCCCTGATGGCCCTATTAACTGGCAGAGCAGC
CTTCACCCTTGGATCTATGAGTAAACTAATGTTTGGTTGAGGAGCCTAAT
TGTTCCTGNAGTTAGACTTATCCCTATCCCTATCCCTATTTCCTTATTTA
TGGTTACTCCTTGTTGGTGAACTGTTATGAACTATTGAGTTAAATTGAGA
CCAATCCT
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