CK937233

Overview
NameCK937233
Unique NameCK937233
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length761
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10142 contig Csv1_Contig10142:8..769. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK937233 vs. ExPASy Swiss-Prot
Match: GL117_ARATH (Germin-like protein subfamily 1 member 17 OS=Arabidopsis thaliana GN=At5g39150 PE=2 SV=1)

HSP 1 Score: 276.559 bits (706), Expect = 1.057e-73
Identity = 136/199 (68.34%), Postives = 158/199 (79.40%), Query Frame = 2
Query:  128 DPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLG*PGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADAVFGANPSINPDFLGKAFQLDPKIVKDLQNKFIN 724
            DP  LQD CVAI+DPK+GVFVNGKFCKDPK A+AEDFF SGL   G T N++  + T  NV+QIPGLNTLGIS  RIDYAPYGQ PPH HPRA+EI +++EGTLYVGFV+S+Q NN L AKVLN GDVFVFP G+IHFQ NIGKT A A++ L+SQ  G +TIAD VFG+ P INPD L +AFQLD  +VKDL+ KF N
Sbjct:   23 DPSPLQDFCVAIDDPKNGVFVNGKFCKDPKQAKAEDFFSSGLNQAGITNNKVQSNVTTVNVDQIPGLNTLGISLVRIDYAPYGQNPPHTHPRATEILVLVEGTLYVGFVSSNQDNNRLFAKVLNPGDVFVFPIGMIHFQVNIGKTPAVAFAGLSSQNAGVITIADTVFGSTPPINPDILAQAFQLDVNVVKDLEAKFKN 221          
BLAST of CK937233 vs. ExPASy Swiss-Prot
Match: GL115_ARATH (Germin-like protein subfamily 1 member 15 OS=Arabidopsis thaliana GN=At5g39120 PE=2 SV=1)

HSP 1 Score: 276.559 bits (706), Expect = 1.057e-73
Identity = 136/199 (68.34%), Postives = 158/199 (79.40%), Query Frame = 2
Query:  128 DPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLG*PGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADAVFGANPSINPDFLGKAFQLDPKIVKDLQNKFIN 724
            DP  LQD CVAI+DPK+GVFVNGKFCKDPK A+AEDFF SGL   G T N++  + T  NV+QIPGLNTLGIS  RIDYAPYGQ PPH HPRA+EI +++EGTLYVGFV+S+Q NN L AKVLN GDVFVFP G+IHFQ NIGKT A A++ L+SQ  G +TIAD VFG+ P INPD L +AFQLD  +VKDL+ KF N
Sbjct:   23 DPSPLQDFCVAIDDPKNGVFVNGKFCKDPKQAKAEDFFSSGLNQAGITNNKVKSNVTTVNVDQIPGLNTLGISLVRIDYAPYGQNPPHTHPRATEILVLVEGTLYVGFVSSNQDNNRLFAKVLNPGDVFVFPIGMIHFQVNIGKTPAVAFAGLSSQNAGVITIADTVFGSTPPINPDILAQAFQLDVNVVKDLEAKFKN 221          
BLAST of CK937233 vs. ExPASy Swiss-Prot
Match: GL119_ARATH (Germin-like protein subfamily 1 member 19 OS=Arabidopsis thaliana GN=At5g39180 PE=2 SV=1)

HSP 1 Score: 276.174 bits (705), Expect = 1.381e-73
Identity = 136/199 (68.34%), Postives = 158/199 (79.40%), Query Frame = 2
Query:  128 DPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLG*PGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADAVFGANPSINPDFLGKAFQLDPKIVKDLQNKFIN 724
            DP  LQD CVAI+DPK+GVFVNGKFCKDPK A+AEDFF SGL   G T N++  + T  NV+QIPGLNTLGIS  RIDYAPYGQ PPH HPRA+EI +++EGTLYVGFV+S+Q NN L AKVLN GDVFVFP G+IHFQ NIGKT A A++ L+SQ  G +TIAD VFG+ P INPD L +AFQLD  +VKDL+ KF N
Sbjct:   23 DPSPLQDFCVAIDDPKNGVFVNGKFCKDPKQAKAEDFFSSGLNQAGITNNKVQSNVTTVNVDQIPGLNTLGISLVRIDYAPYGQNPPHTHPRATEILVLVEGTLYVGFVSSNQDNNRLFAKVLNPGDVFVFPIGMIHFQVNIGKTPAVAFAGLSSQNAGVITIADIVFGSTPPINPDILAQAFQLDVNVVKDLEAKFKN 221          
BLAST of CK937233 vs. ExPASy Swiss-Prot
Match: GL114_ARATH (Germin-like protein subfamily 1 member 14 OS=Arabidopsis thaliana GN=At5g39110 PE=2 SV=1)

HSP 1 Score: 275.404 bits (703), Expect = 2.356e-73
Identity = 135/199 (67.84%), Postives = 157/199 (78.89%), Query Frame = 2
Query:  128 DPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLG*PGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADAVFGANPSINPDFLGKAFQLDPKIVKDLQNKFIN 724
            DP  LQD CVAI D K+GVFVNGKFCKDPK A+AEDFF+SGL   G T N++  + T  NV+QIPGLNTLGIS  RIDYAPYGQ PPH HPRA+EI +++EGTLYVGFV+S+Q NN L AKVLN GDVFVFP G+IHFQ NIGKT A A++ L+SQ  G +TIAD VFG+ P INPD L +AFQLD  +VKDL+ KF N
Sbjct:   24 DPSPLQDFCVAIGDLKNGVFVNGKFCKDPKQAKAEDFFYSGLNQAGTTNNKVKSNVTTVNVDQIPGLNTLGISLVRIDYAPYGQNPPHTHPRATEILVLVEGTLYVGFVSSNQDNNRLFAKVLNPGDVFVFPIGMIHFQVNIGKTPAVAFAGLSSQNAGVITIADTVFGSTPPINPDILAQAFQLDVNVVKDLEAKFKN 222          
BLAST of CK937233 vs. ExPASy Swiss-Prot
Match: GL113_ARATH (Germin-like protein subfamily 1 member 13 OS=Arabidopsis thaliana GN=GLP6 PE=2 SV=1)

HSP 1 Score: 274.248 bits (700), Expect = 5.248e-73
Identity = 135/199 (67.84%), Postives = 158/199 (79.40%), Query Frame = 2
Query:  128 DPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLG*PGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADAVFGANPSINPDFLGKAFQLDPKIVKDLQNKFIN 724
            DP  LQD CVAI+D K+GVFVNGKFCKDPK A+AEDFFFSGL   G+T N++  + T  NV+QIPGLNT+GIS  RIDYAPYGQ PPH HPRA+EI +++EGTLYVGFV+S+Q NN L AKVL  GDVFVFP G+IHFQ NIGKT A A++ L+SQ  G +TIAD VFG+ P INPD L +AFQLD  IVKDL+ KF N
Sbjct:   24 DPSPLQDFCVAIDDLKNGVFVNGKFCKDPKQAKAEDFFFSGLNQAGSTNNKVRSNVTTVNVDQIPGLNTMGISLVRIDYAPYGQNPPHTHPRATEILVLIEGTLYVGFVSSNQDNNRLFAKVLYPGDVFVFPIGMIHFQVNIGKTPAVAFAGLSSQNAGVITIADTVFGSTPPINPDILAQAFQLDVNIVKDLEAKFRN 222          
BLAST of CK937233 vs. ExPASy Swiss-Prot
Match: GL120_ARATH (Germin-like protein subfamily 1 member 20 OS=Arabidopsis thaliana GN=GLP5A PE=1 SV=1)

HSP 1 Score: 265.003 bits (676), Expect = 3.184e-70
Identity = 133/220 (60.45%), Postives = 162/220 (73.64%), Query Frame = 2
Query:   59 MKVIQFLIGFXXXXXXXXXXXXTDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLG*PGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADAVFGANPSINPDFLGKAFQLDPKIVKDLQNKF 718
            M+V Q L+ F             DP  LQD CVAI+D K GVFVNG+FCKDPK   A+DFFFSGL  PGNT N++G + T  NV+QIPGLNT+GIS  RIDYAP+GQ PPH HPR SEI +++EGTLYVGFV+S+Q NN L AKVL+ GDVFVFP G+IHFQ N+GK  A A++ L+SQ  G +TIA+ VFG+NP I P+ L +AFQLD  +VK+LQ KF
Sbjct:    1 MRVSQSLVPFAIIALVLSFVNAYDPSPLQDFCVAIDDLK-GVFVNGRFCKDPKRVDAKDFFFSGLNVPGNTNNQVGSNVTTVNVDQIPGLNTMGISLVRIDYAPHGQNPPHTHPRGSEILVLVEGTLYVGFVSSNQDNNRLFAKVLHPGDVFVFPIGMIHFQVNVGKIPAVAFAGLSSQNAGVITIANTVFGSNPPIYPELLARAFQLDASVVKELQAKF 219          
BLAST of CK937233 vs. ExPASy Swiss-Prot
Match: GL118_ARATH (Germin-like protein subfamily 1 member 18 OS=Arabidopsis thaliana GN=GLP2A PE=2 SV=2)

HSP 1 Score: 265.003 bits (676), Expect = 3.184e-70
Identity = 133/220 (60.45%), Postives = 162/220 (73.64%), Query Frame = 2
Query:   59 MKVIQFLIGFXXXXXXXXXXXXTDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLG*PGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADAVFGANPSINPDFLGKAFQLDPKIVKDLQNKF 718
            M+V Q L+ F             DP  LQD CVAI+D K GVFVNG+FCKDPK   A+DFFFSGL  PGNT N++G + T  NV+QIPGLNT+GIS  RIDYAP+GQ PPH HPR SEI +++EGTLYVGFV+S+Q NN L AKVL+ GDVFVFP G+IHFQ N+GK  A A++ L+SQ  G +TIA+ VFG+NP I P+ L +AFQLD  +VK+LQ KF
Sbjct:    1 MRVSQSLVPFAIIALVLSFVNAYDPSPLQDFCVAIDDLK-GVFVNGRFCKDPKRVDAKDFFFSGLNMPGNTNNQVGSNVTTVNVDQIPGLNTMGISLVRIDYAPHGQNPPHTHPRGSEILVLVEGTLYVGFVSSNQDNNRLFAKVLHPGDVFVFPIGMIHFQVNVGKIPAVAFAGLSSQNAGVITIANTVFGSNPPIYPELLARAFQLDASVVKELQAKF 219          
BLAST of CK937233 vs. ExPASy Swiss-Prot
Match: GL116_ARATH (Germin-like protein subfamily 1 member 16 OS=Arabidopsis thaliana GN=At5g39130 PE=2 SV=1)

HSP 1 Score: 264.233 bits (674), Expect = 5.431e-70
Identity = 134/220 (60.91%), Postives = 162/220 (73.64%), Query Frame = 2
Query:   59 MKVIQFLIGFXXXXXXXXXXXXTDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLG*PGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADAVFGANPSINPDFLGKAFQLDPKIVKDLQNKF 718
            M+V Q LI F             DP  LQD CVAI+D K GVFVNG+FCKDP+   A+DFFFSGL  PGNT N++G + T  NV+QIPGLNT+GIS  RIDYAP+GQ PPH HPR SEI +++EGTLYVGFV+S+Q NN L AKVL+ GDVFVFP G+IHFQ NIGK  A A++ L+SQ  G +TIA+ VFG+NP I P+ L +AFQLD  +VK+LQ KF
Sbjct:    1 MRVSQSLIPFAIIALVLSFVNAYDPSPLQDFCVAIDDLK-GVFVNGRFCKDPERVDAKDFFFSGLNVPGNTNNQVGSNVTTVNVDQIPGLNTMGISLVRIDYAPHGQNPPHTHPRGSEILVLVEGTLYVGFVSSNQDNNRLFAKVLHPGDVFVFPIGMIHFQLNIGKIPAIAFAGLSSQNAGVITIANTVFGSNPPIYPELLARAFQLDANVVKELQAKF 219          
BLAST of CK937233 vs. ExPASy Swiss-Prot
Match: GL17_ARATH (Germin-like protein subfamily 1 member 7 OS=Arabidopsis thaliana GN=At3g05950 PE=2 SV=1)

HSP 1 Score: 261.151 bits (666), Expect = 4.597e-69
Identity = 128/197 (64.97%), Postives = 154/197 (78.17%), Query Frame = 2
Query:  128 DPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLG*PGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADAVFGANPSINPDFLGKAFQLDPKIVKDLQNKF 718
            DP  LQD CVA++D   GVFVNGKFCKDPK  +AEDFF SGL   GNT NR+G + T+ NV++IPGLNTLG+S  RID+AP GQ PPH HPRA+EI +V+EGTL VGFVTS+Q NN L +KVL  GDVFVFP G+IHFQ N+G+TNA A++ L SQ PG +TIADAVFG+ PSI P+ L KAFQLD  +VK L+ +F
Sbjct:   26 DPSPLQDFCVAVDDAS-GVFVNGKFCKDPKYVKAEDFFTSGLNIAGNTINRVGSNVTNVNVDKIPGLNTLGVSLVRIDFAPGGQNPPHTHPRATEILVVVEGTLLVGFVTSNQDNNRLFSKVLYPGDVFVFPIGMIHFQVNVGRTNAVAFAGLGSQNPGTITIADAVFGSKPSIMPEILAKAFQLDVNVVKYLEARF 221          
BLAST of CK937233 vs. ExPASy Swiss-Prot
Match: GL19_ARATH (Putative germin-like protein subfamily 1 member 9 OS=Arabidopsis thaliana GN=At5g38910 PE=2 SV=1)

HSP 1 Score: 253.447 bits (646), Expect = 9.586e-67
Identity = 129/221 (58.37%), Postives = 148/221 (66.97%), Query Frame = 2
Query:   59 MKVIQFLIGFXXXXXXXXXXXXTDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLG*PGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADAVFGANPSINPDFLGKAFQLDPKIVKDLQNKFI 721
            MK   FL               +DP  LQD CV +N P DGVFVNGKFCKDPKL   EDFFF+GL        + G + T  NV  +PGLNTLGIS  RIDY  YGQ PPH HPRASE+  V  GTL+VGFVTS+   N L +K L +GDVFVFPQGLIHFQ N+GK  A A++ L+SQ PG +TIAD VFG+NP I+P FL  AFQ+DPKIV DLQ KFI
Sbjct:    1 MKSFSFLAVLSILAITLSLSKASDPSSLQDFCVGVNTPADGVFVNGKFCKDPKLVTVEDFFFTGLHEARPPNPKTGSNVTAVNVNNLPGLNTLGISLVRIDYGVYGQNPPHTHPRASEVLYVAVGTLFVGFVTSNP-ENRLFSKTLYEGDVFVFPQGLIHFQVNVGKYPAVAFAGLSSQNPGVITIADTVFGSNPQIDPSFLASAFQVDPKIVMDLQTKFI 220          
The following BLAST results are available for this feature:
BLAST of CK937233 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
GL117_ARATH1.057e-7368.34Germin-like protein subfamily 1 member 17 OS=Arabi... [more]
GL115_ARATH1.057e-7368.34Germin-like protein subfamily 1 member 15 OS=Arabi... [more]
GL119_ARATH1.381e-7368.34Germin-like protein subfamily 1 member 19 OS=Arabi... [more]
GL114_ARATH2.356e-7367.84Germin-like protein subfamily 1 member 14 OS=Arabi... [more]
GL113_ARATH5.248e-7367.84Germin-like protein subfamily 1 member 13 OS=Arabi... [more]
GL120_ARATH3.184e-7060.45Germin-like protein subfamily 1 member 20 OS=Arabi... [more]
GL118_ARATH3.184e-7060.45Germin-like protein subfamily 1 member 18 OS=Arabi... [more]
GL116_ARATH5.431e-7060.91Germin-like protein subfamily 1 member 16 OS=Arabi... [more]
GL17_ARATH4.597e-6964.97Germin-like protein subfamily 1 member 7 OS=Arabid... [more]
GL19_ARATH9.586e-6758.37Putative germin-like protein subfamily 1 member 9 ... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004512_E12 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone F80DAB0003_IIIF_E12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK937233 ID=CK937233; Name=CK937233; organism=Citrus sinensis; type=EST; length=761bp
GGGGAATCACAACACTTGATTAAAGTTTGAGATAGGCACATCCTGTGACT
TAATCACCATGAAGGTAATTCAATTTCTTATAGGTTTTGCCCTCTTGGCT
TTGGCTTCTTCTTTGGCCTCTGCCACTGACCCTGGCCATCTTCAAGATGT
CTGTGTAGCCATCAATGACCCCAAGGATGGTGTGTTTGTGAATGGGAAGT
TCTGCAAGGACCCCAAGCTTGCGAGAGCAGAAGATTTCTTCTTCTCAGGG
CTAGGCTAGCCTGGAAACACAGCAAATCGACTTGGTGTTGATGAAACAGA
TGCAAATGTTGAGCAAATTCCAGGACTCAACACCCTTGGCATATCAGCAT
TCCGTATTGACTATGCACCATATGGCCAAAGGCCACCTCACATTCACCCC
CGTGCCAGCGAAATCTTCTTAGTCCTGGAAGGAACTCTTTATGTCGGTTT
TGTGACATCAGACCAACTGAATAACACACTCATCGCAAAAGTTCTAAATA
AGGGAGATGTTTTTGTGTTTCCACAAGGTTTGATTCACTTCCAATTCAAC
ATTGGAAAAACAAATGCTGCTGCCTATTCTGCTCTAAACAGCCAATTCCC
GGGTGAAGTTACCATAGCCGACGCAGTCTTTGGAGCCAATCCTTCAATCA
ATCCCGATTTTCTTGGCAAGGCATTCCAGTTGGACCCAAAGATAGTGAAA
GATCTTCAAAATAAGTTCATTAATGGCAATTAGGAGAAGGAATTAATGAG
CTTTAATATAA
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