CN187108
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN187108 vs. ExPASy Swiss-Prot
Match: TI10A_ARATH (Protein TIFY 10A OS=Arabidopsis thaliana GN=TIFY10A PE=1 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 2.546e-24 Identity = 76/216 (35.19%), Postives = 110/216 (50.93%), Query Frame = 2 Query: 113 SGQKPSVAQTCNLLSQYFKENGRFANKGV-------------------QTLNLLPNLENSAEISRVLNVKASDFFANMPTFASNNS-------------VNEARTEHGSSQMTIIYAGKVFVFNDISAEKAKEIMALATKASSSNAVVN-PELNNNSQTV--------------------------PIARRASLHRFFEKRKDRAIARAPYQVNCP 583 +G+KPS +QTC+ LSQY KENG F + + T++L P E S S V +VK ++ F P+F+S++S + E ++ +TI YAG+V VFND SAEKAKE++ LA+K ++++ N ++ +N T+ PIARRASLHRF EKRKDR ++APYQ+ P Sbjct: 17 TGKKPSFSQTCSRLSQYLKENGSFGDLSLGMACKPDVNGTLGNSRQPTTTMSLFP-CEASNMDSMVQDVKPTNLFPRQPSFSSSSSSLPKEDVLKMTQTTRSVKPESQTAPLTIFYAGQVIVFNDFSAEKAKEVINLASKGTANSLAKNQTDIRSNIATIANQVPHPRKTTTQEPIQSSPTPLTELPIARRASLHRFLEKRKDRVTSKAPYQLCDP 231
BLAST of CN187108 vs. ExPASy Swiss-Prot
Match: TI10B_ARATH (Protein TIFY 10B OS=Arabidopsis thaliana GN=TIFY10B PE=1 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 8.475e-20 Identity = 68/221 (30.77%), Postives = 99/221 (44.80%), Query Frame = 2 Query: 113 SGQKPSVAQTCNLLSQYFKENGRFANKGVQTLNLLPNLENSAEISRVLN-----------------VKASDFFANMPTFASNNS-------------VNEARTEHGSSQMTIIYAGKVFVFNDISAEKAKEIMALATKASSSN-AVVNPELNNNSQT-----------------------------------VPIARRASLHRFFEKRKDRAIARAPYQVN 577 SG+KPS +QTC LS+Y KE G F + + + P++ + ++N +K F +F+S++S + E S+ +TI Y G+V VF+D SAEKAKE++ LA K S+ + E+NNN +PIARRASLHRF EKRKDR ++APYQ++ Sbjct: 12 SGRKPSFSQTCTRLSRYLKEKGSFGDLSLG-MTCKPDVNGGSRQPTMMNLFPCEASGMDSSAGQEDIKPKTMFPRQSSFSSSSSSGTKEDVQMIKETTKSVKPESQSAPLTIFYGGRVMVFDDFSAEKAKEVIDLANKGSAKSFTCFTAEVNNNHSAYSQKEIASSPNPVCSPAKTAAQEPIQPNPASLACELPIARRASLHRFLEKRKDRITSKAPYQID 231
BLAST of CN187108 vs. ExPASy Swiss-Prot
Match: TI11B_ARATH (Protein TIFY 11B OS=Arabidopsis thaliana GN=TIFY11B PE=1 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.466e-19 Identity = 80/213 (37.56%), Postives = 105/213 (49.30%), Query Frame = 2 Query: 110 SSGQKP---SVAQTCNLLSQYFKENGRFAN-------------------KGVQTLNLLPNLENSAE-----ISRVLNVKASDFFANMPTFASNNSVNEARTEHGSSQMTIIYAGKVFVFNDISAEKAKEIMALATKAS-----SSNA----------VVNPELN------NNS--------QTVP-IARRASLHRFFEKRKDRAIARAPYQVN 577 S+GQ P + +Q C+LLS+Y KE G F N KG Q N++ +E S I + +AS + + + + E G+SQ+TI + GKV VFN+ +KAKEIM +A +A+ S N+ VV P+LN NN Q V IARRASLHRFF KRKDRA+ARAPYQVN Sbjct: 2 STGQAPEKSNFSQRCSLLSRYLKEKGSFGNINMGLARKSDLELAGKFDLKGQQ--NVIKKVETSETRPFKLIQKFSIGEASTSTEDKAIYIDLSEPAKVAPESGNSQLTIFFGGKVMVFNEFPEDKAKEIMEVAKEANHVAVDSKNSQSHMNLDKSNVVIPDLNEPTSSGNNEDQETGQQHQVVERIARRASLHRFFAKRKDRAVARAPYQVN 212
BLAST of CN187108 vs. ExPASy Swiss-Prot
Match: TI11A_ARATH (Protein TIFY 11A OS=Arabidopsis thaliana GN=TIFY11A PE=1 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 2.088e-18 Identity = 68/198 (34.34%), Postives = 95/198 (47.98%), Query Frame = 2 Query: 119 QKPSVAQTCNLLSQYFKENGRFANKGVQTLNLLPNLENSAEISRVLN-------VKASDFFANMPTFASNNSVNE----ARTEHGSSQMTIIYAGKVFVFNDISAEKAKEIMALATKASSSNAV-----VNPELNNN--SQTVP---------------------------IARRASLHRFFEKRKDRAIARAPYQVN 577 +K + C+LLS+Y KE G F N L L ++S + + + + P+ +S V + + ++ GSSQ+TI + GKV V+N+ +KAKEIM +A +A + +N E NNN S +P IARRASLHRFF KRKDRA+ARAPYQVN Sbjct: 14 EKSDFTRRCSLLSRYLKEKGSFGNID---LGLYRKPDSSLALPGKFDPPGKQNAMHKAGHSKGEPSTSSGGKVKDVADLSESQPGSSQLTIFFGGKVLVYNEFPVDKAKEIMEVAKQAKPVTEINIQTPINDENNNNKSSMVLPDLNEPTDNNHLTKEQQQQQEQNQIVERIARRASLHRFFAKRKDRAVARAPYQVN 208 The following BLAST results are available for this feature:
BLAST of CN187108 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN187108 ID=CN187108; Name=CN187108; organism=Citrus sinensis; type=EST; length=747bpback to top |