CN187102
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN187102 vs. ExPASy Swiss-Prot
Match: PHF5_ARATH (Uncharacterized protein At1g07170/At2g30000 OS=Arabidopsis thaliana GN=At1g07170 PE=2 SV=1) HSP 1 Score: 229.18 bits (583), Expect = 1.755e-59 Identity = 102/104 (98.08%), Postives = 104/104 (100.00%), Query Frame = -2 Query: 409 DLIMCRKQPGIAIGRLCEKCDGKCVICDSYVRPCTLVRVCDECNYGSFQGRCVICGGVGISDAYFCKECTQQEKDRDGCPKIVNLGSAKTDLFYERKKYGFKKR 720 DLIMCRKQPGIAIGRLCEKCDGKCVICDSYVRPCTLVR+CDECNYGSFQGRCVICGGVGISDAY+CKECTQQEKDRDGCPKIVNLGSAKTDLFYERKKYGFKKR Sbjct: 7 DLIMCRKQPGIAIGRLCEKCDGKCVICDSYVRPCTLVRICDECNYGSFQGRCVICGGVGISDAYYCKECTQQEKDRDGCPKIVNLGSAKTDLFYERKKYGFKKR 110
BLAST of CN187102 vs. ExPASy Swiss-Prot
Match: PHF5A_RAT (PHD finger-like domain-containing protein 5A OS=Rattus norvegicus GN=Phf5a PE=2 SV=1) HSP 1 Score: 215.698 bits (548), Expect = 2.008e-55 Identity = 94/104 (90.38%), Postives = 100/104 (96.15%), Query Frame = -2 Query: 409 DLIMCRKQPGIAIGRLCEKCDGKCVICDSYVRPCTLVRVCDECNYGSFQGRCVICGGVGISDAYFCKECTQQEKDRDGCPKIVNLGSAKTDLFYERKKYGFKKR 720 DLI CRKQ G+AIGRLCEKCDGKCVICDSYVRPCTLVR+CDECNYGS+QGRCVICGG G+SDAY+CKECT QEKDRDGCPKIVNLGS+KTDLFYERKKYGFKKR Sbjct: 7 DLIFCRKQAGVAIGRLCEKCDGKCVICDSYVRPCTLVRICDECNYGSYQGRCVICGGPGVSDAYYCKECTIQEKDRDGCPKIVNLGSSKTDLFYERKKYGFKKR 110
BLAST of CN187102 vs. ExPASy Swiss-Prot
Match: PHF5A_MOUSE (PHD finger-like domain-containing protein 5A OS=Mus musculus GN=Phf5a PE=2 SV=1) HSP 1 Score: 215.698 bits (548), Expect = 2.008e-55 Identity = 94/104 (90.38%), Postives = 100/104 (96.15%), Query Frame = -2 Query: 409 DLIMCRKQPGIAIGRLCEKCDGKCVICDSYVRPCTLVRVCDECNYGSFQGRCVICGGVGISDAYFCKECTQQEKDRDGCPKIVNLGSAKTDLFYERKKYGFKKR 720 DLI CRKQ G+AIGRLCEKCDGKCVICDSYVRPCTLVR+CDECNYGS+QGRCVICGG G+SDAY+CKECT QEKDRDGCPKIVNLGS+KTDLFYERKKYGFKKR Sbjct: 7 DLIFCRKQAGVAIGRLCEKCDGKCVICDSYVRPCTLVRICDECNYGSYQGRCVICGGPGVSDAYYCKECTIQEKDRDGCPKIVNLGSSKTDLFYERKKYGFKKR 110
BLAST of CN187102 vs. ExPASy Swiss-Prot
Match: PHF5A_HUMAN (PHD finger-like domain-containing protein 5A OS=Homo sapiens GN=PHF5A PE=1 SV=1) HSP 1 Score: 215.698 bits (548), Expect = 2.008e-55 Identity = 94/104 (90.38%), Postives = 100/104 (96.15%), Query Frame = -2 Query: 409 DLIMCRKQPGIAIGRLCEKCDGKCVICDSYVRPCTLVRVCDECNYGSFQGRCVICGGVGISDAYFCKECTQQEKDRDGCPKIVNLGSAKTDLFYERKKYGFKKR 720 DLI CRKQ G+AIGRLCEKCDGKCVICDSYVRPCTLVR+CDECNYGS+QGRCVICGG G+SDAY+CKECT QEKDRDGCPKIVNLGS+KTDLFYERKKYGFKKR Sbjct: 7 DLIFCRKQAGVAIGRLCEKCDGKCVICDSYVRPCTLVRICDECNYGSYQGRCVICGGPGVSDAYYCKECTIQEKDRDGCPKIVNLGSSKTDLFYERKKYGFKKR 110
BLAST of CN187102 vs. ExPASy Swiss-Prot
Match: PHF5_DROME (Uncharacterized protein CG9548 OS=Drosophila melanogaster GN=CG9548 PE=3 SV=2) HSP 1 Score: 208.764 bits (530), Expect = 2.454e-53 Identity = 91/103 (88.35%), Postives = 98/103 (95.15%), Query Frame = -2 Query: 412 DLIMCRKQPGIAIGRLCEKCDGKCVICDSYVRPCTLVRVCDECNYGSFQGRCVICGGVGISDAYFCKECTQQEKDRDGCPKIVNLGSAKTDLFYERKKYGFKK 720 DLI CRKQPG+AIGRLCEK DGKCVICDSYVRPCTLVR+CDECNYGS+QGRCVICGG G+SDAY+CK CT QEKDRDGCPKIVNLGS+KTDLFYERKKYGFK+ Sbjct: 7 DLIFCRKQPGVAIGRLCEKDDGKCVICDSYVRPCTLVRICDECNYGSYQGRCVICGGPGVSDAYYCKSCTIQEKDRDGCPKIVNLGSSKTDLFYERKKYGFKQ 109
BLAST of CN187102 vs. ExPASy Swiss-Prot
Match: INI1_SCHPO (Pre-mRNA-splicing factor ini1 OS=Schizosaccharomyces pombe GN=ini1 PE=2 SV=1) HSP 1 Score: 167.162 bits (422), Expect = 8.190e-41 Identity = 66/99 (66.67%), Postives = 85/99 (85.86%), Query Frame = -2 Query: 424 DLIMCRKQPGIAIGRLCEKCDGKCVICDSYVRPCTLVRVCDECNYGSFQGRCVICGGVGISDAYFCKECTQQEKDRDGCPKIVNLGSAKTDLFYERKKY 720 DL++CR+QPGI +G+LCE+CD KC ICDS+VRP TLVR+CDEC +GS Q RC+ICG G+SD Y+C ECT+ E DRDGCP+++NLGS++TD FYERKK+ Sbjct: 7 DLVLCRRQPGITVGKLCERCDEKCPICDSHVRPTTLVRICDECAFGSSQDRCIICGAPGVSDCYYCSECTRMEYDRDGCPRVINLGSSRTDWFYERKKF 105
BLAST of CN187102 vs. ExPASy Swiss-Prot
Match: RDS3_YEAST (Pre-mRNA-splicing factor RDS3 OS=Saccharomyces cerevisiae GN=RDS3 PE=1 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 7.683e-31 Identity = 58/99 (58.59%), Postives = 74/99 (74.75%), Query Frame = -2 Query: 427 DLIMCRKQPGIAIGRLCEKCDGKCVICDSYVRPCTLVRVCDECNYGSFQGRCVICG-GVGISDAYFCKECTQQEKDRDGCPKIVNLGSAKTDLFYERKK 720 DLIMC KQPG+ G LCEKCDGKC ICDSYVRP VRVC+ C++G C+IC VG++DA++C EC + KD+DGCP+I+NLGS + D +E+KK Sbjct: 7 DLIMCLKQPGVQTGLLCEKCDGKCPICDSYVRPKRKVRVCENCSFGKQAKNCIICNLNVGVNDAFYCWECCRLGKDKDGCPRILNLGSNRLDRHFEKKK 105 The following BLAST results are available for this feature:
BLAST of CN187102 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN187102 ID=CN187102; Name=CN187102; organism=Citrus sinensis; type=EST; length=721bpback to top |