CN187094
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN187094 vs. ExPASy Swiss-Prot
Match: FBRL1_ARATH (rRNA 2'-O-methyltransferase fibrillarin 1 OS=Arabidopsis thaliana GN=FIB1 PE=1 SV=1) HSP 1 Score: 292.738 bits (748), Expect = 1.215e-78 Identity = 143/152 (94.08%), Postives = 148/152 (97.37%), Query Frame = 3 Query: 240 SKVVVEPHRHEGVFIAKGKEDALVTKNLVAGEAVYNEKRISVQNEDGTKVEYRIWNPFRSKLAAAVLGGVDNIWIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIF 695 SKV+VEPHRH GVFIAKGKEDALVTKNLV GEAVYNEKRISVQNEDGTKVEYR+WNPFRSKLAAA+LGGVDNIWIKPGA+VLYLGAASGTTVSHVSD+VGP G VYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIF Sbjct: 67 SKVIVEPHRHAGVFIAKGKEDALVTKNLVPGEAVYNEKRISVQNEDGTKVEYRVWNPFRSKLAAAILGGVDNIWIKPGAKVLYLGAASGTTVSHVSDLVGPEGCVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIF 218
BLAST of CN187094 vs. ExPASy Swiss-Prot
Match: FBRL2_ARATH (rRNA 2'-O-methyltransferase fibrillarin 2 OS=Arabidopsis thaliana GN=FIB2 PE=1 SV=2) HSP 1 Score: 291.197 bits (744), Expect = 3.536e-78 Identity = 142/152 (93.42%), Postives = 147/152 (96.71%), Query Frame = 3 Query: 240 SKVVVEPHRHEGVFIAKGKEDALVTKNLVAGEAVYNEKRISVQNEDGTKVEYRIWNPFRSKLAAAVLGGVDNIWIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIF 695 SKV+VEPHRH GVFIAKGKEDALVTKNLV GEAVYNEKRISVQNEDGTK EYR+WNPFRSKLAAA+LGGVDNIWIKPGA+VLYLGAASGTTVSHVSD+VGP G VYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIF Sbjct: 78 SKVIVEPHRHAGVFIAKGKEDALVTKNLVPGEAVYNEKRISVQNEDGTKTEYRVWNPFRSKLAAAILGGVDNIWIKPGAKVLYLGAASGTTVSHVSDLVGPEGCVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIF 229
BLAST of CN187094 vs. ExPASy Swiss-Prot
Match: FBRL_SCHPO (rRNA 2'-O-methyltransferase fibrillarin OS=Schizosaccharomyces pombe GN=fib1 PE=1 SV=1) HSP 1 Score: 264.618 bits (675), Expect = 3.545e-70 Identity = 124/152 (81.58%), Postives = 143/152 (94.08%), Query Frame = 3 Query: 240 SKVVVEPHRHEGVFIAKGKEDALVTKNLVAGEAVYNEKRISVQNEDGTKVEYRIWNPFRSKLAAAVLGGVDNIWIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIF 695 +KV++EPHRH GVFIA+GKED LVT+NLV GE+VYNEKRISV + DGTKVEYR+WNPFRSKLAA +LGG+DNI+IKPGARVLYLGAA+GT+VSHV+D+VGP G+VYAVEFSHRSGRDL+NMAKKRTNVIPI+EDARH KYRMLVGMVDV+F Sbjct: 71 AKVIIEPHRHAGVFIARGKEDLLVTRNLVPGESVYNEKRISVDSPDGTKVEYRVWNPFRSKLAAGILGGLDNIYIKPGARVLYLGAANGTSVSHVADVVGPEGLVYAVEFSHRSGRDLLNMAKKRTNVIPIVEDARHVQKYRMLVGMVDVVF 222
BLAST of CN187094 vs. ExPASy Swiss-Prot
Match: FBRL_RAT (rRNA 2'-O-methyltransferase fibrillarin OS=Rattus norvegicus GN=Fbl PE=1 SV=2) HSP 1 Score: 253.062 bits (645), Expect = 1.067e-66 Identity = 122/150 (81.33%), Postives = 137/150 (91.33%), Query Frame = 3 Query: 246 VVVEPHRHEGVFIAKGKEDALVTKNLVAGEAVYNEKRISVQNEDGTKVEYRIWNPFRSKLAAAVLGGVDNIWIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIF 695 V+VEPHRHEGVFI +GKEDALVTKNLV GE+VY EKR+S+ D K+EYR WNPFRSKLAAA+LGGVD I IKPGA+VLYLGAASGTTVSHVSDIVGP+G+VYAVEFSHRSGRDL+N+AKKRTN+IP+IEDARHP KYRML+ MVDVIF Sbjct: 92 VMVEPHRHEGVFICRGKEDALVTKNLVPGESVYGEKRVSISEGDD-KIEYRAWNPFRSKLAAAILGGVDQIHIKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKRTNIIPVIEDARHPHKYRMLIAMVDVIF 240
BLAST of CN187094 vs. ExPASy Swiss-Prot
Match: FBRL_MOUSE (rRNA 2'-O-methyltransferase fibrillarin OS=Mus musculus GN=Fbl PE=1 SV=2) HSP 1 Score: 253.062 bits (645), Expect = 1.067e-66 Identity = 122/150 (81.33%), Postives = 137/150 (91.33%), Query Frame = 3 Query: 246 VVVEPHRHEGVFIAKGKEDALVTKNLVAGEAVYNEKRISVQNEDGTKVEYRIWNPFRSKLAAAVLGGVDNIWIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIF 695 V+VEPHRHEGVFI +GKEDALVTKNLV GE+VY EKR+S+ D K+EYR WNPFRSKLAAA+LGGVD I IKPGA+VLYLGAASGTTVSHVSDIVGP+G+VYAVEFSHRSGRDL+N+AKKRTN+IP+IEDARHP KYRML+ MVDVIF Sbjct: 92 VMVEPHRHEGVFICRGKEDALVTKNLVPGESVYGEKRVSISEGDD-KIEYRAWNPFRSKLAAAILGGVDQIHIKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKRTNIIPVIEDARHPHKYRMLIAMVDVIF 240
BLAST of CN187094 vs. ExPASy Swiss-Prot
Match: FBRL_HUMAN (rRNA 2'-O-methyltransferase fibrillarin OS=Homo sapiens GN=FBL PE=1 SV=2) HSP 1 Score: 253.062 bits (645), Expect = 1.067e-66 Identity = 122/150 (81.33%), Postives = 137/150 (91.33%), Query Frame = 3 Query: 246 VVVEPHRHEGVFIAKGKEDALVTKNLVAGEAVYNEKRISVQNEDGTKVEYRIWNPFRSKLAAAVLGGVDNIWIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIF 695 V+VEPHRHEGVFI +GKEDALVTKNLV GE+VY EKR+S+ D K+EYR WNPFRSKLAAA+LGGVD I IKPGA+VLYLGAASGTTVSHVSDIVGP+G+VYAVEFSHRSGRDL+N+AKKRTN+IP+IEDARHP KYRML+ MVDVIF Sbjct: 86 VMVEPHRHEGVFICRGKEDALVTKNLVPGESVYGEKRVSISEGDD-KIEYRAWNPFRSKLAAAILGGVDQIHIKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKRTNIIPVIEDARHPHKYRMLIAMVDVIF 234
BLAST of CN187094 vs. ExPASy Swiss-Prot
Match: FBRL_XENLA (rRNA 2'-O-methyltransferase fibrillarin OS=Xenopus laevis GN=fbl PE=2 SV=1) HSP 1 Score: 252.677 bits (644), Expect = 1.394e-66 Identity = 123/152 (80.92%), Postives = 138/152 (90.79%), Query Frame = 3 Query: 243 KVVVEPHRHEGVFIAKGKEDALVTKNLVAGEAVYNEKRISVQNEDG-TKVEYRIWNPFRSKLAAAVLGGVDNIWIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIF 695 KV+VEPHRHEG+FI +GKEDALVTKNLV GE+VY EKRISV EDG K EYR WNPFRSK+AAA+LGGVD I IKPG +VLYLGAASGTTVSHVSD+VGP G+VYAVEFSHRSGRDL+N+AKKRTN+IP+IEDARHP KYR+LVGMVDV+F Sbjct: 87 KVIVEPHRHEGIFICRGKEDALVTKNLVPGESVYGEKRISV--EDGEVKTEYRAWNPFRSKIAAAILGGVDQIHIKPGVKVLYLGAASGTTVSHVSDVVGPEGLVYAVEFSHRSGRDLINVAKKRTNIIPVIEDARHPHKYRILVGMVDVVF 236
BLAST of CN187094 vs. ExPASy Swiss-Prot
Match: FBRL_DROER (rRNA 2'-O-methyltransferase fibrillarin OS=Drosophila erecta GN=Fib PE=3 SV=1) HSP 1 Score: 249.595 bits (636), Expect = 1.180e-65 Identity = 120/150 (80.00%), Postives = 136/150 (90.67%), Query Frame = 3 Query: 246 VVVEPHRHEGVFIAKGKEDALVTKNLVAGEAVYNEKRISVQNEDGTKVEYRIWNPFRSKLAAAVLGGVDNIWIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIF 695 V +EPHRHEGVFIA+GKEDALVT+N V G VY EKRISV+N +G K+EYR+WNPFRSKLAAAVLGGV+ I + PG++VLYLGAASGTTVSHVSD+VGP G+VYAVEFSHRSGRDL+N+AKKRTN+IPIIEDARHP KYRMLVGMVD IF Sbjct: 112 VTIEPHRHEGVFIARGKEDALVTRNFVPGSEVYGEKRISVEN-NGEKIEYRVWNPFRSKLAAAVLGGVEQIHMPPGSKVLYLGAASGTTVSHVSDVVGPEGLVYAVEFSHRSGRDLINVAKKRTNIIPIIEDARHPHKYRMLVGMVDTIF 260
BLAST of CN187094 vs. ExPASy Swiss-Prot
Match: FBRL_DROME (rRNA 2'-O-methyltransferase fibrillarin OS=Drosophila melanogaster GN=Fib PE=1 SV=1) HSP 1 Score: 247.284 bits (630), Expect = 5.856e-65 Identity = 119/150 (79.33%), Postives = 135/150 (90.00%), Query Frame = 3 Query: 246 VVVEPHRHEGVFIAKGKEDALVTKNLVAGEAVYNEKRISVQNEDGTKVEYRIWNPFRSKLAAAVLGGVDNIWIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIF 695 V +EPHRHEGVFIA+GKEDALVT+N V G VY EKRISV+ +G K+EYR+WNPFRSKLAAAVLGGV+ I + PG++VLYLGAASGTTVSHVSD+VGP G+VYAVEFSHRSGRDL+N+AKKRTN+IPIIEDARHP KYRMLVGMVD IF Sbjct: 111 VTIEPHRHEGVFIARGKEDALVTRNFVPGSEVYGEKRISVET-NGEKIEYRVWNPFRSKLAAAVLGGVEQIHMPPGSKVLYLGAASGTTVSHVSDVVGPEGLVYAVEFSHRSGRDLINVAKKRTNIIPIIEDARHPHKYRMLVGMVDTIF 259
BLAST of CN187094 vs. ExPASy Swiss-Prot
Match: FBRL_CANGA (rRNA 2'-O-methyltransferase fibrillarin OS=Candida glabrata GN=NOP1 PE=3 SV=1) HSP 1 Score: 241.121 bits (614), Expect = 4.197e-63 Identity = 115/158 (72.78%), Postives = 138/158 (87.34%), Query Frame = 3 Query: 240 SKVVVEPHRHEGVFIAKGKEDALVTKNLVAGEAVYNEKRISVQN---EDG---TKVEYRIWNPFRSKLAAAVLGGVDNIWIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIF 695 +KVV+EPH+H+GV+IA+GKED LVTKN+ GE+VY EKR+SV+ EDG TKVEYR+WNPFRSKLAA ++GG+D ++I PG +VLYLGAASGT+VSHVSD+VGP GVVYAVEFSHR GR+L++MAKKR NVIPIIEDARHP KYRMLVGMVD +F Sbjct: 80 AKVVIEPHKHDGVYIARGKEDLLVTKNMAPGESVYGEKRVSVEEPSKEDGVPPTKVEYRVWNPFRSKLAAGIMGGLDELFIAPGKKVLYLGAASGTSVSHVSDVVGPEGVVYAVEFSHRPGRELISMAKKRPNVIPIIEDARHPQKYRMLVGMVDAVF 237 The following BLAST results are available for this feature:
BLAST of CN187094 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 73
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Sequences
The
following sequences are available for this feature:
EST sequence >CN187094 ID=CN187094; Name=CN187094; organism=Citrus sinensis; type=EST; length=697bpback to top |