CN187089

Overview
NameCN187089
Unique NameCN187089
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length789
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CN187089 vs. ExPASy Swiss-Prot
Match: TSJT1_TOBAC (Stem-specific protein TSJT1 OS=Nicotiana tabacum GN=TSJT1 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 6.866e-15
Identity = 36/64 (56.25%), Postives = 48/64 (75.00%), Query Frame = -3 
Query:  596 LDNLGSLRQQYGLAKSANEVILVIEAYKALRDRAPYPPNHVVGHLSGYFAFIVYDKSTSTLFVA 787
            LDN   LR+ YGL++ A E ++++EAYK LRDRAPYPP+ V+  L G FAFI++D   STLF+A
Sbjct:   85 LDNTFDLRKHYGLSRQATEAMIMVEAYKVLRDRAPYPPDQVIKELEGKFAFILFDSKASTLFLA 148
The following BLAST results are available for this feature:
BLAST of CN187089 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
TSJT1_TOBAC6.866e-1556.25Stem-specific protein TSJT1 OS=Nicotiana tabacum G... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS05_0003O18_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0003O18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN187089 ID=CN187089; Name=CN187089; organism=Citrus sinensis; type=EST; length=789bp
TTTTTTTTTTAGTTCGAACACTGGGACAAGACTTTATTAACCATTAAACA
TAACTGTACATTGGACAAGACTGGATAAAAGGTTAATTTGAAAGCAAACA
CCTAAGAAACTTGAAAGGAGCTATAGCTACAAAGAAAGCTGGGTGCTACA
TTTCTCACAAGCATACACTATTTCCATTCCAGTTGATGATTTTTTGCTAC
ACTCATTTTGTTATTCACATGGACCCTCTTGCAGCTTGCATCCCCACAAA
CTTTTTTTCCCCCAAACCGCGGATTTTTAACTGTTGGCTAATATCTCAAG
TGGAGAAGAAAGATCTTCTAACCTTCTACTCTGTGGCTGCAAAAACTGCT
GGCCCTTCCACCTTAAATGTAGCACCCCAGATCTCTTCTTCCGCAGCAGG
AACCGCAGTGATCTTGTTCTTTGGATTCTCAAAGCTTCTCAGTCCTCCAA
CTGCTGTTGAGAAGAAACAACCTTGAGGGAAAGAAGCAAGTGACTTGCCG
CAAGCACCTTTGAGCAAGTCAGCATCATCAGCAAAGGCAACATGTCCATC
AGCAGTGATTCCCCAATAAAGAGGAACCTTACCAAATTGGTCAGAAGCCA
CAAACAAGGTGGAGGTGGACTTGTCGTAGACAATGAAGGCAAAGTACCCA
CTAAGGTGGCCAACGACATGGTTCGGTGGGTAAGGGGCCCGATCACGCAG
AGCCTTGTATGCCTCAATCACCAAGATCACTTCATTTGCCGACTTAGCTA
GTCCATATTGCTGCCTCAGGCTTCCCAAGTTATCAAGTG
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