CN187087

Overview
NameCN187087
Unique NameCN187087
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length780
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN187087 vs. ExPASy Swiss-Prot
Match: K125_TOBAC (125 kDa kinesin-related protein OS=Nicotiana tabacum GN=TKRP125 PE=1 SV=1)

HSP 1 Score: 288.886 bits (738), Expect = 2.124e-77
Identity = 151/258 (58.53%), Postives = 188/258 (72.87%), Query Frame = -3
Query:    5 VVRLHKACSNANLEEISAFASSNSESIKEFLASEAREAASIYENLQTTLSTQQGEMAIFAREMRQRFQVTIERTKDIAEYTNGFLQXXXXXXXXXENYAVQADENQMKSIADFQKAYEDQTKSDTEKLIADVTSLVSSHMRRQTELVEARLVDFRENAVSSKLFLDGHASSVEGITTDAKRKWQAFAMQADNDAKDGADHSSAKHCRMELLLRECVNSGESAFGRWKRTYESVNEMESKHVSSMISLTRNASYSNEQH 778
            VVRLHKA SNA LEE+S  ASSNS S KEFL +EA EA S+++ LQ+TLST QGEMA FARE+RQRF  + E   +I+     F           E +A   DE Q  SIA+F+KAYE+Q+KSD EKLIADVTSLVS+HMRRQ ELV ARLVD RE    ++ FLDGH SS+EGITTDAKRKWQ F MQA+ + K+ AD S+AKHCRME L+++CV++ E+A  RW+ T+E VN+M ++HV +M S+ RN   +NEQH
Sbjct:  605 VVRLHKATSNATLEEVSTLASSNSISTKEFLDAEAVEANSMFDELQSTLSTHQGEMAHFARELRQRFNDSTEHLTNISAIIQRFFDKLLDESKRLEKHATTVDEIQTNSIAEFEKAYEEQSKSDAEKLIADVTSLVSNHMRRQKELVGARLVDLRETVSGNRTFLDGHVSSMEGITTDAKRKWQDFYMQAEGETKENADFSAAKHCRMESLMQKCVSTAETALKRWQSTHELVNDMGNQHVLTMHSVVRNICDNNEQH 862          
BLAST of CN187087 vs. ExPASy Swiss-Prot
Match: K125_ARATH (Probable 125 kDa kinesin-related protein OS=Arabidopsis thaliana GN=At2g36200 PE=2 SV=1)

HSP 1 Score: 281.567 bits (719), Expect = 3.391e-75
Identity = 144/259 (55.60%), Postives = 196/259 (75.68%), Query Frame = -3
Query:    2 VVRLHKACSNANLEEISAFASSNSESIKEFLASEAREAASIYENLQTTLSTQQGEMAIFAREMRQRFQVTIERTKDIAEYTNGFLQXXXXXXXXXENYAVQADENQMKSIADFQKAYEDQTKSDTEKLIADVTSLVSSHMRRQTELVEARLVDFRENAVSSKLFLDGHASSVEGITTDAKRKWQAFAMQADNDAKDGADHSSAKHCRMELLLRECVNSGESAFGRWKRTYESVNEMESKHVSSMISLTRNASYSNEQHD 778
            VVRLHKA +NA LEE+SA  +S++ SI EFLAS     +S+++ LQ+ LS+ QGEMA+FARE+RQRF  T+E+T++++EYT+ F Q         E  A +A+++Q+ SI DFQK YE Q+KSDT+KLIAD+T+LVSSH+RRQ ELV++RL +F++   S+K FLD H S+V  +T DAKRKW+ F+MQA+N+A++GAD S+AKHCRMELLL++ V   ESAF   K T+ES+ EM SK V+ + SL R+A  SNEQHD
Sbjct:  609 VVRLHKANANACLEEVSALTTSSACSIDEFLASGDETTSSLFDELQSALSSHQGEMALFARELRQRFHTTMEQTQEMSEYTSTFFQKLMEESKNAETRAAEANDSQINSIIDFQKTYEAQSKSDTDKLIADLTNLVSSHIRRQHELVDSRLHNFKDAVSSNKTFLDEHVSAVNNLTKDAKRKWETFSMQAENEAREGADFSAAKHCRMELLLQQSVGHAESAFKHCKITHESLKEMTSKQVTDVSSLVRSACDSNEQHD 867          
The following BLAST results are available for this feature:
BLAST of CN187087 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
K125_TOBAC2.124e-7758.53125 kDa kinesin-related protein OS=Nicotiana tabac... [more]
K125_ARATH3.391e-7555.60Probable 125 kDa kinesin-related protein OS=Arabid... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS05_0003O17_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0003O17, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN187087 ID=CN187087; Name=CN187087; organism=Citrus sinensis; type=EST; length=780bp
TATCATGCTGCTCATTACTATAAGAAGCATTCCTCGTAAGCGAAATCATG
CTCGATACATGTTTACTCTCCATCTCATTCACTGATTCATATGTCCTCTT
CCAACGCCCAAAAGCTGACTCACCAGAGTTTACACACTCCCGTAGAAGCA
ATTCCATTCTACAATGTTTGGCAGAAGAGTGGTCGGCACCATCTTTGGCA
TCATTGTCAGCTTGCATGGCAAATGCCTGCCATTTTCGCTTAGCATCAGT
AGTTATGCCCTCCACTGATGAAGCATGTCCATCTAAAAATAGCTTGCTTG
AAACAGCATTTTCTCTAAAATCAACAAGCCTTGCTTCCACCAATTCTGTT
TGACGACGCATGTGACTAGAGACTAGGCTAGTCACATCAGCGATAAGCTT
CTCTGTATCAGATTTTGTTTGGTCCTCATAAGCCTTCTGAAAATCAGCAA
TGCTCTTCATTTGATTCTCATCAGCTTGCACAGCATAATTTTCTAATGAT
TTTGACTCTTCCAAAAGCTTCTGTAGAAATCCATTAGTGTACTCAGCAAT
GTCCTTTGTTCGCTCAATGGTAACTTGGAACCTCTGACGCATTTCCCTTG
CAAAGATAGCCATTTCTCCTTGTTGAGTCGAAAGAGTAGTCTGAAGATTT
TCATATATTGAAGCAGCTTCTCTAGCCTCTGATGCTAGAAATTCTTTAAT
AGATTCTGAATTAGAAGAAGCAAAAGCCGAAATTTCCTCTAAATTCGCAT
TTGAGCAGGCCTTATGCAAACGCACAACAT
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