CX675235
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX675235 vs. ExPASy Swiss-Prot
Match: FB285_ARATH (F-box protein At5g46170 OS=Arabidopsis thaliana GN=At5g46170 PE=2 SV=1) HSP 1 Score: 399.053 bits (1024), Expect = 1.814e-110 Identity = 210/265 (79.25%), Postives = 221/265 (83.40%), Query Frame = 1 Query: 73 DDEEMDQGGVTHHSPTQVLKNFNEIRFLRIELPSGELGIDDGVLLKWRADFGSTLDNCVILGAASVMNNVLAKALDIGATDLPCXXXXXXXXXXXXXXXXGATDDNGSIPESFYTNGGLKLRVVWTISSLIAASARHYLLQPIIAEHKTLDSLVLTDADGQGVLCMNREQLEELRVKPLSASSASKRTLVPALNMRLWYAPYLELPDGVVLKGATLVAIRPSEQSASKKEVSDGSWVGSAFEEPYGTAAKMLVKRRTYCLEMNSF 867 D E++QGGVTHHSPTQVLKNF+EIR+LRIELPSGELGIDDGVLLKWRA+FGSTLDNCVILGA+SV+ P +DDNGSIPESFYTNGGLKLRVVWTISSLIAASARHYLLQPIIAEHKTLDSLVLTD+DGQGVLCMNR+QLEELRVKPL+ASSASKRTLVPALNMRLWYAP LELPDG VLKGATLVAIRPSE SKKEVSD SWV SAFEEPY TAAKMLVKRRTYCLEMNSF Sbjct: 146 DGGEIEQGGVTHHSPTQVLKNFDEIRYLRIELPSGELGIDDGVLLKWRAEFGSTLDNCVILGASSVI------------PPNPMRVSQACDTTTVVEAPGSGSDDNGSIPESFYTNGGLKLRVVWTISSLIAASARHYLLQPIIAEHKTLDSLVLTDSDGQGVLCMNRDQLEELRVKPLAASSASKRTLVPALNMRLWYAPTLELPDGTVLKGATLVAIRPSE---SKKEVSDISWVSSAFEEPYETAAKMLVKRRTYCLEMNSF 395
BLAST of CX675235 vs. ExPASy Swiss-Prot
Match: FB237_ARATH (F-box protein At4g18380 OS=Arabidopsis thaliana GN=At4g18380 PE=2 SV=1) HSP 1 Score: 398.667 bits (1023), Expect = 2.369e-110 Identity = 207/265 (78.11%), Postives = 223/265 (84.15%), Query Frame = 1 Query: 73 DDEEMDQGGVTHHSPTQVLKNFNEIRFLRIELPSGELGIDDGVLLKWRADFGSTLDNCVILGAASVMNNVLAKALDIGATDLPCXXXXXXXXXXXXXXXXGATDDNGSIPESFYTNGGLKLRVVWTISSLIAASARHYLLQPIIAEHKTLDSLVLTDADGQGVLCMNREQLEELRVKPLSASSASKRTLVPALNMRLWYAPYLELPDGVVLKGATLVAIRPSEQSASKKEVSDGSWVGSAFEEPYGTAAKMLVKRRTYCLEMNSF 867 DD E++QGGVTHHSPTQVLKNF+EI+FL+IELPSGELGIDDGVLLKWRA+FGSTL+NCVILGA+SV+ + + + + A +DNGSIPESFYTNGGLKLRVVWTISSLIAASARHYLLQPIIAEHKTLDSLVLTD DGQGVLCMNR+QLEELRVKPLSASSASKRTLVPALNMRLWYAP LELPDG VLKGATLVAIRPSE SKKEV D SWV SAF+EPYG AAKMLVKRRTYCLEMNSF Sbjct: 137 DDGEIEQGGVTHHSPTQVLKNFDEIKFLKIELPSGELGIDDGVLLKWRAEFGSTLENCVILGASSVIPPTNSDKTEASSAPV------------------AAVEDNGSIPESFYTNGGLKLRVVWTISSLIAASARHYLLQPIIAEHKTLDSLVLTDVDGQGVLCMNRDQLEELRVKPLSASSASKRTLVPALNMRLWYAPSLELPDGTVLKGATLVAIRPSE---SKKEVCDVSWVSSAFDEPYGVAAKMLVKRRTYCLEMNSF 380
BLAST of CX675235 vs. ExPASy Swiss-Prot
Match: FB19_ARATH (F-box protein At1g30200 OS=Arabidopsis thaliana GN=At1g30200 PE=2 SV=1) HSP 1 Score: 375.17 bits (962), Expect = 2.805e-103 Identity = 194/260 (74.62%), Postives = 212/260 (81.54%), Query Frame = 1 Query: 88 DQGGVTHHSPTQVLKNFNEIRFLRIELPSGELGIDDGVLLKWRADFGSTLDNCVILGAASVMNNVLAKALDIGATDLPCXXXXXXXXXXXXXXXXGATDDNGSIPESFYTNGGLKLRVVWTISSLIAASARHYLLQPIIAEHKTLDSLVLTDADGQGVLCMNREQLEELRVKPLSASSASKRTLVPALNMRLWYAPYLELPDGVVLKGATLVAIRPSEQSASKKEVSDGSWVGSAFEEPYGTAAKMLVKRRTYCLEMNSF 867 D+ GVTHHSPTQVLKNF EIRFL+IELP+GELGI+DG+LLKWRADFGSTLDNC+ILGA+SV+ + K + +DNG+IPESFYTNGGLKLRVVWTISSLIAASARHYLLQPII EHK+LD LVL+DADGQGVLCMNREQLEELRV PLSASSASKRTLVPALNMRLWYAP L+LPDG VLKGATLVAIRPSE SKKEV D SW+ AFEEP+GT AKML+KRRTYCLEMNSF Sbjct: 146 DEIGVTHHSPTQVLKNFGEIRFLKIELPTGELGIEDGILLKWRADFGSTLDNCMILGASSVIQSNSVKNHE-----------------------NSVDEDNGNIPESFYTNGGLKLRVVWTISSLIAASARHYLLQPIINEHKSLDRLVLSDADGQGVLCMNREQLEELRVTPLSASSASKRTLVPALNMRLWYAPELDLPDGTVLKGATLVAIRPSE---SKKEVCDASWLSDAFEEPFGTVAKMLIKRRTYCLEMNSF 379
BLAST of CX675235 vs. ExPASy Swiss-Prot
Match: FB91_ARATH (F-box protein At1g78100 OS=Arabidopsis thaliana GN=At1g78100 PE=1 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 1.242e-34 Identity = 86/259 (33.20%), Postives = 135/259 (52.12%), Query Frame = 1 Query: 112 SPTQVLKNFNEIRFLRIELPSGELGIDDGVLLKWRADFGSTLDNCVILGAASVMNNVLAKALDIGATDLPCXXXXXXXXXXXXXXXXGATDDNGSIPESFYTNGGLKLRVVWTISSLIAASARHYLLQPIIAEHKTLDSLVLTDADGQGVLCMNREQLEELRVKPL-----SASSASKRTLVPALNMRLWYAPYLELPDGVVLKGATLVAIRPSEQSASKKEVS--DGSWVGSAFEEPYGTAAKMLVKRRTYCLEMNSF 867 +P Q+L F IR L +EL G++ ++ G +KW+A+FG TL +CVI+ S N A D G + GLK RVVWTIS+L+AAS RHYL++ ++ +HK ++ L++ D+DG+G + M+ ++E R + + +RT+VP++ M + +AP L L G+ L+ ATLV +RP+ ++ +V ++ G + YG A L+KRR LEMNSF Sbjct: 101 TPAQILSGFERIRNLEVELYGGDVKLEKGAAVKWKAEFGKTLKSCVIVAFRSATVNTSAATEAAAVVD-------------------------GVVESDSEFVCGLKTRVVWTISALMAASTRHYLMRDLVKDHKEMEKLIVRDSDGEGTVVMDAAGMKEYRETEVRGDNKESERVGERTVVPSVRMSMRHAPSLMLKSGICLEAATLVVVRPTGVASDDNDVELVTEAFAGDGDDCMYGEAVTALLKRRRNVLEMNSF 334
BLAST of CX675235 vs. ExPASy Swiss-Prot
Match: FB303_ARATH (F-box protein At1g22220 OS=Arabidopsis thaliana GN=At1g22220 PE=2 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 2.768e-34 Identity = 92/259 (35.52%), Postives = 139/259 (53.67%), Query Frame = 1 Query: 115 PTQVLKNFNEIRFLRIELPSGELGIDDGVLLKWRADFGSTLDNCVILGAASVMNNVLAKALDIGATDLPCXXXXXXXXXXXXXXXXGATDDNGSIPESFYTNGGLKLRVVWTISSLIAASARHYLLQPIIAEHKTLDSLVLTDADGQGVLCMNREQLEEL-----RVKPLSASSASKRTLVPALNMRLWYAPYLELPDGVVLKGATLVAIRPSE---QSASKKEVSDGSWVGSAFEEPYGTAAKMLVKRRTYCLEMNSF 867 P ++L F+ IR L +ELP G++ ++ G +KW+A+FG TL +CVI+ S G P G F T GLK RVVWTIS+L+AAS+RHYL++ ++ EH+ ++SLV+ D + +G + MN E L+EL RV+ +KR++VP++ M + +AP L+L G+ L+ ATLV +RPS + E++ ++VG YG A L+K + LEMNSF Sbjct: 91 PFKILSRFDRIRNLDVELPGGDVKLEKGAAVKWKAEFGKTLKSCVIVAFRSA-----------GTVSSPVAV-------------------EGESDAEFVT--GLKTRVVWTISALMAASSRHYLMREVVKEHEEIESLVMRDKEREGTVVMNEEGLKELRNTEARVEDEERVVKNKRSVVPSVRMSMRHAPSLKLKSGICLESATLVIVRPSGADFEVGDDAELATEAFVGDCM---YGEAVVALLKCKKNALEMNSF 314 The following BLAST results are available for this feature:
BLAST of CX675235 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX675235 ID=CX675235; Name=CX675235; organism=Citrus sinensis; type=EST; length=890bpback to top |