CN187023
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN187023 vs. ExPASy Swiss-Prot
Match: RSSA_SOYBN (40S ribosomal protein SA OS=Glycine max PE=2 SV=1) HSP 1 Score: 199.519 bits (506), Expect = 1.883e-50 Identity = 108/161 (67.08%), Postives = 116/161 (72.05%), Query Frame = -1 Query: 362 LLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYRXXXXXXXXXXXXXXAIDYATAEYSMNLTSGE-QWPSQIADGGWAGGEVQKPIPVVPYF-----PEAPAATVPLGGD 826 LLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPG KWDVMVDLFFYR A+DYA +++ + + QWP I D W+ V +PIP VP EAPAA GGD Sbjct: 128 LLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGLKWDVMVDLFFYREPEEAKQQEEEEAPAVDYAITDFNAGAIAADGQWPGTI-DQSWSDA-VPQPIPAVPGVNWGAPAEAPAAA---GGD 283
BLAST of CN187023 vs. ExPASy Swiss-Prot
Match: RSSA_CICAR (40S ribosomal protein SA OS=Cicer arietinum GN=RAP40 PE=2 SV=1) HSP 1 Score: 194.512 bits (493), Expect = 6.057e-49 Identity = 101/141 (71.63%), Postives = 109/141 (77.30%), Query Frame = -1 Query: 407 LLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYRXXXXXXXXXXXXXXAIDYATAEYSMN-LTSGEQWPSQIADGGWAGGEVQKPIPVVP 826 LLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPM YVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPG KWDVMVDLFFYR A DYA A+++++ + S QWP+ I D W V +PIP VP Sbjct: 124 LLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMNYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGLKWDVMVDLFFYREPEEAKQPEEDEVAAPDYAIADFNVSAIPSDGQWPAAI-DQPW-NDAVPQPIPAVP 262
BLAST of CN187023 vs. ExPASy Swiss-Prot
Match: RSSA_DAUCA (40S ribosomal protein SA OS=Daucus carota GN=179B PE=2 SV=1) HSP 1 Score: 193.741 bits (491), Expect = 1.033e-48 Identity = 100/158 (63.29%), Postives = 106/158 (67.09%), Query Frame = -1 Query: 353 LLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYRXXXXXXXXXXXXXXAIDYATAEYSMNLTSGEQWPSQIADGGWAGGEVQKPIPVVPYFPEAPAATVPLGGDGWD 826 LLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRG I GHKW+VMVDLFFYR DY + + +QW + I D W G VQ VP A P+ GDGWD Sbjct: 121 LLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGVISQGHKWEVMVDLFFYREPEETKDQEEEDLPVGDYVADYAAAPIGGADQW-NAIPDAQWGGDVVQPANSAVPAGTWTDAG--PIAGDGWD 275
BLAST of CN187023 vs. ExPASy Swiss-Prot
Match: RSSA_VITVI (40S ribosomal protein SA OS=Vitis vinifera GN=GSVIVT00034021001 PE=3 SV=1) HSP 1 Score: 192.971 bits (489), Expect = 1.429e-48 Identity = 106/168 (63.10%), Postives = 114/168 (67.86%), Query Frame = -1 Query: 353 LLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYRXXXXXXXXXXXXXXAI-DYATAEY---SMNLTSGEQWPSQIADGGWAGGEVQ--KPIPVVP---YFPEAP-AATVPLGGDGWD 826 LLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMR TI PGHKWDVMVDLFFYR A DY +Y ++ G W + I D G +V PIP VP + AP + VP+ DGWD Sbjct: 121 LLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRRTIAPGHKWDVMVDLFFYREPEEPKEQEGDEVVAAPDYGITDYQATALGGLGGGDWGAPITDAPQWGADVPAVAPIPAVPGSNWGDAAPMPSAVPIATDGWD 288 HSP 2 Score: 21.557 bits (44), Expect = 1.429e-48 Identity = 7/16 (43.75%), Postives = 8/16 (50.00%), Query Frame = -3 Query: 255 ITAPDVSAAPQPTGWE 302 + P V P P GWE Sbjct: 297 VPPPVVEGVPPPAGWE 312
BLAST of CN187023 vs. ExPASy Swiss-Prot
Match: RSSA2_ARATH (40S ribosomal protein Sa-2 OS=Arabidopsis thaliana GN=RPSaB PE=1 SV=2) HSP 1 Score: 181.415 bits (459), Expect = 5.306e-45 Identity = 97/160 (60.62%), Postives = 108/160 (67.50%), Query Frame = -1 Query: 365 LLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYRXXXXXXXXXXXXXXAIDYATAEYSMNLTSGEQW-PSQIADGGWAGGEVQKPIPVVPYFPEA-----PAATVPLGG 826 LLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPM +VDIGIPANNKGKHSIGCLFWLLARMVLQMRGTI KWDVMVDLFFYR + A + + G+QW +QI+D W+ GEV++PI P AA+VP G Sbjct: 126 LLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMGFVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTILAAQKWDVMVDLFFYREPEEAKQEGD------EEAEVQADYGMVGGDQWTTAQISDAAWS-GEVEQPISAAPAVGVTVAAGWEAASVPAAG 278
BLAST of CN187023 vs. ExPASy Swiss-Prot
Match: RSSA_BRANA (40S ribosomal protein SA OS=Brassica napus GN=LRP PE=2 SV=1) HSP 1 Score: 180.644 bits (457), Expect = 9.051e-45 Identity = 98/163 (60.12%), Postives = 105/163 (64.42%), Query Frame = -1 Query: 353 LLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYRXXXXXXXXXXXXXXAIDYATAEYSM---NLTSGEQW-PSQIADGGWAGGEVQKPIPVVPYFPEAPAATVPLGGD-GWD 826 LLILTDPRTDHQPIKE ALGNIP IAFCDTDSPMR+VDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRP KWDVMVDLFFYR AE+ + G+QW + I D W GE Q PI P + P + GWD Sbjct: 122 LLILTDPRTDHQPIKEGALGNIPIIAFCDTDSPMRFVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPAQKWDVMVDLFFYREPEETKPEDEDEVA----PQAEFGLPAPEYGGGDQWTTAAIPDAAWP-GEAQAPISAAPAAGSWNDSAAPAAAEGGWD 279
BLAST of CN187023 vs. ExPASy Swiss-Prot
Match: RSSA1_ARATH (40S ribosomal protein Sa-1 OS=Arabidopsis thaliana GN=RPSaA PE=1 SV=3) HSP 1 Score: 179.874 bits (455), Expect = 1.544e-44 Identity = 101/164 (61.59%), Postives = 108/164 (65.85%), Query Frame = -1 Query: 353 LLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYR-XXXXXXXXXXXXXXAIDYA---TAEYSMNLTSGEQW-PSQIADGGWAGGEVQKPIPVVPYFPE-APAATVPLGGDGWD 826 LLILTDPRTDHQPIKE ALGNIP IAFCDTDSPMR+VDIGIPANNKGKHSIGCLFWLLARMVLQMRGTI G KWDVMVDLFFYR +Y EY M G+QW +QI D W GE Q PI P + +A P G GW+ Sbjct: 125 LLILTDPRTDHQPIKEGALGNIPIIAFCDTDSPMRFVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIAAGQKWDVMVDLFFYREPEETKPEDEDEAGPQAEYGALPAPEYGM--VGGDQWTTAQIPDAAWP-GEGQAPISAAPAAASWSDSAAAPADG-GWE 284
BLAST of CN187023 vs. ExPASy Swiss-Prot
Match: RSSA_OSTTA (40S ribosomal protein SA OS=Ostreococcus tauri GN=Ot03g03270 PE=3 SV=2) HSP 1 Score: 139.813 bits (351), Expect = 1.771e-32 Identity = 65/85 (76.47%), Postives = 73/85 (85.88%), Query Frame = -1 Query: 572 LLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYR 826 +L++TDPRTD QPI E A NIPTIAFCDTDSP++ VDI IPANNK K SIGCL++LLARMVLQMRGTI P + WDVMVDLFFYR Sbjct: 118 VLVVTDPRTDAQPISETAFVNIPTIAFCDTDSPLKNVDIAIPANNKAKQSIGCLYYLLARMVLQMRGTISPANPWDVMVDLFFYR 202
BLAST of CN187023 vs. ExPASy Swiss-Prot
Match: RSSA_OSTLU (40S ribosomal protein SA OS=Ostreococcus lucimarinus (strain CCE9901) GN=OSTLU_12355 PE=3 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 5.152e-32 Identity = 63/85 (74.12%), Postives = 73/85 (85.88%), Query Frame = -1 Query: 572 LLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYR 826 +LI+TDPRTD QPI E A N+PTIAFCDTDSP++ VD+ IPANNK KHSIGCL++LLARMVLQMRGT+ + WDVMVDLFFYR Sbjct: 118 VLIVTDPRTDAQPISETAYVNLPTIAFCDTDSPLKNVDVAIPANNKAKHSIGCLYYLLARMVLQMRGTVSAANPWDVMVDLFFYR 202
BLAST of CN187023 vs. ExPASy Swiss-Prot
Match: RSSA_CHLRE (40S ribosomal protein SA OS=Chlamydomonas reinhardtii GN=CHLREDRAFT_126059 PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 2.164e-30 Identity = 62/85 (72.94%), Postives = 72/85 (84.71%), Query Frame = -1 Query: 572 LLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYR 826 LLILTDPRTDHQP+KE++ NIPTIAFCDTDSP+ +VD+ IPANNKGKHSIG L++LLARMVL+MR I + W V VDLFFYR Sbjct: 116 LLILTDPRTDHQPVKESSYMNIPTIAFCDTDSPLTHVDVAIPANNKGKHSIGVLYFLLARMVLEMRDQINVTNPWSVPVDLFFYR 200 The following BLAST results are available for this feature:
BLAST of CN187023 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 171
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Sequences
The
following sequences are available for this feature:
EST sequence >CN187023 ID=CN187023; Name=CN187023; organism=Citrus sinensis; type=EST; length=826bpback to top |