CN187013
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN187013 vs. ExPASy Swiss-Prot
Match: ZN363_MOUSE (RING finger and CHY zinc finger domain-containing protein 1 OS=Mus musculus GN=Rchy1 PE=1 SV=1) HSP 1 Score: 221.09 bits (562), Expect = 5.007e-57 Identity = 100/231 (43.29%), Postives = 135/231 (58.44%), Query Frame = 1 Query: 46 KEVSLMEIGSGNYGCSHYKRRCKIRAPCCGDIFNCRHCHNEAKNSLETNPLDRHDIPRHEIEKVICSLCGTEQDAQQYCINCGVCMGKYYCAKCKFFDDDITKNQYHCDECGICRTGGKDNFFHCKTCGCCYSKEMKDKHRCVERAMHHNCPICFEFIFDTMKDITVLRCGHTIHLECLKEMEKHYRYTCPVCSKSLWDMSKLWSKIDQEIASTPMPAMYQNKMVWILCND 738 +E + + G GC HY R C ++APCC ++ CR CH +TN + H + R ++++V C C Q AQQ C +C G+YYC+ C FD D K QYHC+ CGICR G K++FFHC C C + ++ KH+C+E NCPIC E I + VL CGH +H C +EM K Y CP+C S DM++ W ++D E+A TPMP+ YQN V ILCND Sbjct: 6 REDGVRNLAQGPRGCEHYDRACLLKAPCCDKLYTCRLCH-------DTN--EDHQLDRFKVKEVQCINCEKLQHAQQTCEDCSTLFGEYYCSICHLFDKD--KRQYHCESCGICRIGPKEDFFHCLKCNLCLTTNLRGKHKCIENVSRQNCPICLEDIHTSRVVAHVLPCGHLLHRTCYEEMLKE-GYRCPLCMHSALDMTRYWRQLDTEVAQTPMPSEYQNVTVDILCND 224
BLAST of CN187013 vs. ExPASy Swiss-Prot
Match: ZN363_HUMAN (RING finger and CHY zinc finger domain-containing protein 1 OS=Homo sapiens GN=RCHY1 PE=1 SV=1) HSP 1 Score: 216.468 bits (550), Expect = 1.233e-55 Identity = 96/221 (43.44%), Postives = 128/221 (57.92%), Query Frame = 1 Query: 76 GNYGCSHYKRRCKIRAPCCGDIFNCRHCHNEAKNSLETNPLDRHDIPRHEIEKVICSLCGTEQDAQQYCINCGVCMGKYYCAKCKFFDDDITKNQYHCDECGICRTGGKDNFFHCKTCGCCYSKEMKDKHRCVERAMHHNCPICFEFIFDTMKDITVLRCGHTIHLECLKEMEKHYRYTCPVCSKSLWDMSKLWSKIDQEIASTPMPAMYQNKMVWILCND 738 G GC HY R C ++APCC ++ CR CH+ ++ H + R ++++V C C Q AQQ C C G+YYC C FD D K QYHC+ CGICR G K++FFHC C C + ++ +H+C+E NCPIC E I + VL CGH +H C +EM K Y CP+C S DM++ W ++D E+A TPMP+ YQN V ILCND Sbjct: 16 GQRGCEHYDRGCLLKAPCCDKLYTCRLCHDNNED---------HQLDRFKVKEVQCINCEKIQHAQQTCEECSTLFGEYYCDICHLFDKD--KKQYHCENCGICRIGPKEDFFHCLKCNLCLAMNLQGRHKCIENVSRQNCPICLEDIHTSRVVAHVLPCGHLLHRTCYEEMLKE-GYRCPLCMHSALDMTRYWRQLDDEVAQTPMPSEYQNMTVDILCND 224
BLAST of CN187013 vs. ExPASy Swiss-Prot
Match: YERG_SCHPO (Uncharacterized RING finger protein C2F3.16 OS=Schizosaccharomyces pombe GN=SPAC2F3.16 PE=2 SV=1) HSP 1 Score: 215.312 bits (547), Expect = 2.747e-55 Identity = 100/245 (40.82%), Postives = 143/245 (58.37%), Query Frame = 1 Query: 10 SSYESEGTYFQEKEVSLMEIGSGNYGCSHYKRRCKIRAPCCGDIFNCRHCHNEAKNSLETNPLDRHDIPRHEIEKVICSLCGTEQDAQQYCINCGVCMGKYYCAKCKFFDDDITKNQYHCDECGICRTGG--KDNFFHCKTCGCCYSKEMKDKHRCVERAMHHNCPICFEFIFDTMKDITVLRCGHTIHLECLKEMEKHYRYTCPVCSKSLWDMSKLWSKIDQEIASTPMPAMYQNKMVWILCND 738 SS + E TY+ +++ L GCSHY R CK++ C + + CRHCHN+A + H + R +E ++C +C Q A QYC C CMG+YYC KCK +DDD K+ YHCD+CGICR G D++FHCKTCG C + + HRC+ER+ NCPIC E++F++ + + L C H +H C +E + Y CP C K++ +++ L+ +D EI PMP Y + I CND Sbjct: 124 SSSDLEKTYYDKEQEIL--------GCSHYMRNCKVQCFDCHEWYTCRHCHNDACD---------HVLERPAVENMLCMICSKVQPAAQYCKYCKNCMGRYYCNKCKLWDDDPNKSSYHCDDCGICRIGRGLGDDYFHCKTCGLCLPISVFNTHRCIERSTDCNCPICGEYMFNSRERVIFLSCSHPLHQRCHEEYIR-TNYRCPTCYKTIINVNSLFRILDMEIERQPMPYPYNTWISTIRCND 350 The following BLAST results are available for this feature:
BLAST of CN187013 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN187013 ID=CN187013; Name=CN187013; organism=Citrus sinensis; type=EST; length=738bpback to top |