CN187010

Overview
NameCN187010
Unique NameCN187010
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length797
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN187010 vs. ExPASy Swiss-Prot
Match: TM111_PONAB (Transmembrane protein 111 OS=Pongo abelii GN=TMEM111 PE=2 SV=3)

HSP 1 Score: 150.599 bits (379), Expect = 9.404e-36
Identity = 79/175 (45.14%), Postives = 110/175 (62.86%), Query Frame = -1
Query:  285 RRVYFCNEENGLLHVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMIIPQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGLRGLFSLILGEENATDDTQRMM-QMSGFGF----DPSKSLGAEKDSLDIIQHEWALPKFEQRAETVLKDL 794
            R+ YF N E+G     K +         +DP M  DMMK N++ ++P  L   W+N  FSGFV  K+PFPLT RF+ MLQ GI+L T+D S+VSS SWYFLN+FGLR ++SLILG++NA D ++ M  QM+G       D +K+   E ++L++  H+WAL   E+  E + KDL
Sbjct:   76 RKYYFNNPEDGFFKKTKRKV--VPPSPMTDPTMLTDMMKGNVTNVLPMILIGGWINMTFSGFVTTKVPFPLTLRFKPMLQQGIELLTLDASWVSSASWYFLNVFGLRSIYSLILGQDNAADQSRMMQEQMTGAAMAMPADTNKAFKTEWEALELTDHQWALDDVEE--ELMAKDL 246          
BLAST of CN187010 vs. ExPASy Swiss-Prot
Match: TM111_HUMAN (Transmembrane protein 111 OS=Homo sapiens GN=TMEM111 PE=1 SV=3)

HSP 1 Score: 150.599 bits (379), Expect = 9.404e-36
Identity = 79/175 (45.14%), Postives = 110/175 (62.86%), Query Frame = -1
Query:  285 RRVYFCNEENGLLHVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMIIPQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGLRGLFSLILGEENATDDTQRMM-QMSGFGF----DPSKSLGAEKDSLDIIQHEWALPKFEQRAETVLKDL 794
            R+ YF N E+G     K +         +DP M  DMMK N++ ++P  L   W+N  FSGFV  K+PFPLT RF+ MLQ GI+L T+D S+VSS SWYFLN+FGLR ++SLILG++NA D ++ M  QM+G       D +K+   E ++L++  H+WAL   E+  E + KDL
Sbjct:   76 RKYYFNNPEDGFFKKTKRKV--VPPSPMTDPTMLTDMMKGNVTNVLPMILIGGWINMTFSGFVTTKVPFPLTLRFKPMLQQGIELLTLDASWVSSASWYFLNVFGLRSIYSLILGQDNAADQSRMMQEQMTGAAMAMPADTNKAFKTEWEALELTDHQWALDDVEE--ELMAKDL 246          
BLAST of CN187010 vs. ExPASy Swiss-Prot
Match: TM111_DANRE (Transmembrane protein 111 OS=Danio rerio GN=tmem111 PE=2 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 1.228e-35
Identity = 78/175 (44.57%), Postives = 113/175 (64.57%), Query Frame = -1
Query:  285 RRVYFCNEENGLLHVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMIIPQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGLRGLFSLILGEENATDDTQRMM-QMSGFGF----DPSKSLGAEKDSLDIIQHEWALPKFEQRAETVLKDL 794
            R+ YF N+E+G     K +         +DP+M  DMMK N++ ++P  L   W+N+ FSGFV  K+PFPLT RF+ MLQ GI+L ++D S+VSS SWYFLN+FGLR ++SLILG++N  D ++ M  QMSG       D +K+  AE ++L++  H+WAL   E+  + + KDL
Sbjct:   76 RKFYFNNQEDGFFKKTKRKV--VPPSPMTDPSMLTDMMKGNVTNVLPMILIGGWINWTFSGFVTTKVPFPLTLRFKPMLQQGIELLSLDASWVSSASWYFLNVFGLRSMYSLILGQDNGADQSRIMQEQMSGAAMAMPADTNKAFKAEWEALELTDHQWALENVEE--DLMSKDL 246          
BLAST of CN187010 vs. ExPASy Swiss-Prot
Match: TM111_BOVIN (Transmembrane protein 111 OS=Bos taurus GN=TMEM111 PE=2 SV=3)

HSP 1 Score: 150.214 bits (378), Expect = 1.228e-35
Identity = 79/175 (45.14%), Postives = 110/175 (62.86%), Query Frame = -1
Query:  285 RRVYFCNEENGLLHVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMIIPQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGLRGLFSLILGEENATDDTQRMM-QMSGFGF----DPSKSLGAEKDSLDIIQHEWALPKFEQRAETVLKDL 794
            R+ YF N E+G     K +         +DP M  DMMK N++ ++P  L   W+N  FSGFV  K+PFPLT RF+ MLQ GI+L T+D S+VSS SWYFLN+FGLR ++SLILG++NA D ++ M  QM+G       D +K+   E ++L++  H+WAL   E+  E + KDL
Sbjct:   76 RKYYFNNPEDGFFKKTKRKV--VPPSPVTDPTMLTDMMKGNVTNVLPMILIGGWINMTFSGFVTTKVPFPLTLRFKPMLQQGIELLTLDASWVSSASWYFLNVFGLRSIYSLILGQDNAADQSRMMQEQMTGAAMAMPADTNKAFKTEWEALELTDHQWALDDVEE--ELMAKDL 246          
BLAST of CN187010 vs. ExPASy Swiss-Prot
Match: TM111_RAT (Transmembrane protein 111 OS=Rattus norvegicus GN=Tmem111 PE=2 SV=3)

HSP 1 Score: 149.443 bits (376), Expect = 2.095e-35
Identity = 78/175 (44.57%), Postives = 110/175 (62.86%), Query Frame = -1
Query:  285 RRVYFCNEENGLLHVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMIIPQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGLRGLFSLILGEENATDDTQRMM-QMSGFGF----DPSKSLGAEKDSLDIIQHEWALPKFEQRAETVLKDL 794
            R+ YF N E+G     K +         +DP M  DMMK N++ ++P  L   W+N  FSGFV  K+PFPLT RF+ MLQ GI+L T+D S+VSS SWYFLN+FGLR ++SLILG++NA D ++ M  QM+G       D +K+   E ++L++  H+WAL   E+  E + +DL
Sbjct:   76 RKYYFNNPEDGFFKKTKRKV--VPPSPMTDPTMLTDMMKGNVTNVLPMILIGGWINMTFSGFVTTKVPFPLTLRFKPMLQQGIELLTLDASWVSSASWYFLNVFGLRSIYSLILGQDNAADQSRMMQEQMTGAAMAMPADTNKAFKTEWEALELTDHQWALDDVEE--ELMARDL 246          
BLAST of CN187010 vs. ExPASy Swiss-Prot
Match: TM111_MOUSE (Transmembrane protein 111 OS=Mus musculus GN=Tmem111 PE=2 SV=3)

HSP 1 Score: 149.443 bits (376), Expect = 2.095e-35
Identity = 78/175 (44.57%), Postives = 110/175 (62.86%), Query Frame = -1
Query:  285 RRVYFCNEENGLLHVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMIIPQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGLRGLFSLILGEENATDDTQRMM-QMSGFGF----DPSKSLGAEKDSLDIIQHEWALPKFEQRAETVLKDL 794
            R+ YF N E+G     K +         +DP M  DMMK N++ ++P  L   W+N  FSGFV  K+PFPLT RF+ MLQ GI+L T+D S+VSS SWYFLN+FGLR ++SLILG++NA D ++ M  QM+G       D +K+   E ++L++  H+WAL   E+  E + +DL
Sbjct:   76 RKYYFNNPEDGFFKKTKRKV--VPPSPMTDPTMLTDMMKGNVTNVLPMILIGGWINMTFSGFVTTKVPFPLTLRFKPMLQQGIELLTLDASWVSSASWYFLNVFGLRSIYSLILGQDNAADQSRMMQEQMTGAAMAMPADTNKAFKTEWEALELTDHQWALDDVEE--ELMARDL 246          
BLAST of CN187010 vs. ExPASy Swiss-Prot
Match: YNY3_SCHPO (UPF0347 membrane protein C1711.03 OS=Schizosaccharomyces pombe GN=SPBC1711.03 PE=2 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 4.231e-28
Identity = 61/140 (43.57%), Postives = 91/140 (65.00%), Query Frame = -1
Query:  309 MDMMKKNLSMIIPQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGLRGLFSLILGEENATDDTQRMMQMSGF------------GFDPSKSLGAEKDSLDIIQHEWALPKFEQR 692
            M+ MK N+ M++PQT+   W+N FFSGF+  K+PFPLT RF+S+ Q+G+    +DV +VSS SWYFLNLFGL+ +++L+LGE NA  +    M M+GF            G D SK + +E +++ I+++E  L   E+R
Sbjct:  113 MESMKGNMLMVVPQTIIMTWINEFFSGFILLKLPFPLTLRFKSIFQSGVATQDLDVQWVSSISWYFLNLFGLKSVYALLLGENNAASNATNEMGMAGFSSAAATAQLIQPGQDISKMMLSEAENVQILKNESLLVDVEKR 252          
BLAST of CN187010 vs. ExPASy Swiss-Prot
Match: TM111_DICDI (Transmembrane protein 111 homolog OS=Dictyostelium discoideum GN=tmem111 PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.152e-25
Identity = 62/143 (43.36%), Postives = 94/143 (65.73%), Query Frame = -1
Query:  309 MFSDPNMAMDMMKKNLSMIIPQTLTFAWVNFFFSGFVAAKIPF-PLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGLRGLFSLILGEENATDDTQRMMQMSGFGFDPS------KSLGAEKDSLDIIQHEWALPKFEQR 716
            MF+DP+   DM+K N+  +IPQ    +WVN FFSGFVA K+PF PLT RF++ LQ GI++ ++DVSYVSS SWYFL  FG  G+ +++LGE   + D+Q ++Q S     P+      K   +EK+++++I+++  +   E R
Sbjct:  116 MFTDPSGITDMLKGNIMHLIPQVTMMSWVNHFFSGFVACKLPFFPLTIRFKTFLQRGIEMGSLDVSYVSSLSWYFLCWFGSEGINAILLGENMVSADSQ-LLQSSIEPGPPTQQTPIHKIYASEKENIEMIRYDSLMTNIEDR 257          
BLAST of CN187010 vs. ExPASy Swiss-Prot
Match: EMC3_YEAS6 (ER membrane protein complex subunit 3 OS=Saccharomyces cerevisiae (strain AWRI1631) GN=AIM27 PE=3 SV=2)

HSP 1 Score: 103.99 bits (258), Expect = 1.009e-21
Identity = 61/148 (41.22%), Postives = 86/148 (58.11%), Query Frame = -1
Query:  309 FSDPNMA---MDMMKKNLSMIIPQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGLRGLFSLILGEENATDDTQRMMQMSGFG----------FDPSKSLGAEKDSLDIIQHEWALPKFEQR 713
            F+DPNM+   M+M K N++  IPQT+   WVN FF+GF+  ++PFPLT +F+ MLQ GI    +DV +VSS SWYF+++ GL  +++LI       +D Q M   +G G              K++ A  + L IIQHE  L   EQR
Sbjct:  106 FNDPNMSNAMMNMAKGNMASFIPQTIIMWWVNHFFAGFILMQLPFPLTAKFKEMLQTGIICQDLDVRWVSSISWYFISVLGLNPVYNLI-----GLND-QDMGIQAGIGGPQGPQGPPQSQVDKAMHAMANDLTIIQHETCLDNVEQR 247          
BLAST of CN187010 vs. ExPASy Swiss-Prot
Match: EMC3_YEAS1 (ER membrane protein complex subunit 3 OS=Saccharomyces cerevisiae (strain RM11-1a) GN=AIM27 PE=3 SV=2)

HSP 1 Score: 103.99 bits (258), Expect = 1.009e-21
Identity = 61/148 (41.22%), Postives = 86/148 (58.11%), Query Frame = -1
Query:  309 FSDPNMA---MDMMKKNLSMIIPQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGLRGLFSLILGEENATDDTQRMMQMSGFG----------FDPSKSLGAEKDSLDIIQHEWALPKFEQR 713
            F+DPNM+   M+M K N++  IPQT+   WVN FF+GF+  ++PFPLT +F+ MLQ GI    +DV +VSS SWYF+++ GL  +++LI       +D Q M   +G G              K++ A  + L IIQHE  L   EQR
Sbjct:  106 FNDPNMSNAMMNMAKGNMASFIPQTIIMWWVNHFFAGFILMQLPFPLTAKFKEMLQTGIICQDLDVRWVSSISWYFISVLGLNPVYNLI-----GLND-QDMGIQAGIGGPQGPQGPPQSQVDKAMHAMANDLTIIQHETCLDNVEQR 247          
The following BLAST results are available for this feature:
BLAST of CN187010 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
TM111_PONAB9.404e-3645.14Transmembrane protein 111 OS=Pongo abelii GN=TMEM1... [more]
TM111_HUMAN9.404e-3645.14Transmembrane protein 111 OS=Homo sapiens GN=TMEM1... [more]
TM111_DANRE1.228e-3544.57Transmembrane protein 111 OS=Danio rerio GN=tmem11... [more]
TM111_BOVIN1.228e-3545.14Transmembrane protein 111 OS=Bos taurus GN=TMEM111... [more]
TM111_RAT2.095e-3544.57Transmembrane protein 111 OS=Rattus norvegicus GN=... [more]
TM111_MOUSE2.095e-3544.57Transmembrane protein 111 OS=Mus musculus GN=Tmem1... [more]
YNY3_SCHPO4.231e-2843.57UPF0347 membrane protein C1711.03 OS=Schizosacchar... [more]
TM111_DICDI1.152e-2543.36Transmembrane protein 111 homolog OS=Dictyostelium... [more]
EMC3_YEAS61.009e-2141.22ER membrane protein complex subunit 3 OS=Saccharom... [more]
EMC3_YEAS11.009e-2141.22ER membrane protein complex subunit 3 OS=Saccharom... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0003M14_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0003M14, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN187010 ID=CN187010; Name=CN187010; organism=Citrus sinensis; type=EST; length=797bp
TTTTTTTTTTTTTTTTTGGCCGATGAATGATGATATTTAAACCATAAATT
ACTCCACCAACTCTACAACGCATGTTTAGTTAGTAAAACCAAAAATTTCT
CAAATAACGATGCTTAACTTACAAGATAAAACTGGGAATTAAAACAGTGG
TTTATAGAAGATTTAAAGTCATGCTGGCTTCAAAGCCGTTCCCAGAGGTC
CACCAAATGGATGAAAATCACCAAGGAACCATTCCCGATGCTATAATTCA
ACAAATAACAACAGATCACCATTGTTCAACCGACAAGATCTTTCAATACT
GTTTCAGCACGCTGCTCAAATTTTGGTAAGGCCCATTCATGCTGAATTAT
GTCCAGACTGTCTTTCTCAGCACCCAAGCTCTTGCTTGGGTCAAAGCCAA
ACCCACTCATTTGCATCATACGCTGAGTATCATCAGTAGCATTTTCTTCC
CCCAGAATGAGGCTAAATAAACCCCTCAGTCCAAACAAATTGAGGAAGTA
CCATGAACGACTACTGACATAGCTTACATCAACAGTGCTCAAGTCAATCC
CATTTTGTAACATTGACCTGAACCTCTGAGTCAGTGGGAATGGTATCTTG
GCTGCAACAAACCCAGAGAAGAAAAAGTTGACCCAAGCAAAAGTAAGGGT
CTGGGGTATGATCATTGAAAGATTTTTCTTCATCATGTCCATTGCCATGT
TAGGATCGGAAAACATTTGCGCTTGCGCATTTTGTGCCTGACCCTTTGGC
ACATGCAACAATCCATTTTCCTCGTTACAGAAATAAACTCTGCGAGC
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