CK936792

Overview
NameCK936792
Unique NameCK936792
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length736
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10835 contig Csv1_Contig10835:194..929. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK936792 vs. ExPASy Swiss-Prot
Match: SUBL_ARATH (Subtilisin-like protease OS=Arabidopsis thaliana GN=ARA12 PE=1 SV=1)

HSP 1 Score: 315.464 bits (807), Expect = 1.936e-85
Identity = 155/226 (68.58%), Postives = 181/226 (80.09%), Query Frame = 1
Query:   58 VVNGASLFGFASGTARGMAAQARVATYKVCWLAGCFGSDILAGMDRAVEDGVNVLSMSIGGGLTDYYRDTVAIGAFTAMAQGIFVSCSAGNGGPYADSISNVAPWITTVGAGTLDRDFPTYVRLGNGKNFSGVSLYSRRPSSGSMVPIVDAADVSSTSSGNLCMTGSLIPAKVAGKIVVCDRGGNSRVEKGVEVKDAGGVGMILTNTDSYGEELVADAQLLPSANV 735
            VV GASL G+ASGTARGMA +ARVA YKVCWL GCF SDILA +D+A+ D VNVLSMS+GGG++DYYRD VAIGAF AM +GI VSCSAGN GP + S+SNVAPWITTVGAGTLDRDFP    LGNGKNF+GVSL+        ++P + A + S+ ++GNLCMTG+LIP KV GKIV+CDRG N+RV+KG  VK AGGVGMIL NT + GEELVADA LLP+  V
Sbjct:  224 VVEGASLLGYASGTARGMAPRARVAVYKVCWLGGCFSSDILAAIDKAIADNVNVLSMSLGGGMSDYYRDGVAIGAFAAMERGILVSCSAGNAGPSSSSLSNVAPWITTVGAGTLDRDFPALAILGNGKNFTGVSLFKGEALPDKLLPFIYAGNASNATNGNLCMTGTLIPEKVKGKIVMCDRGINARVQKGDVVKAAGGVGMILANTAANGEELVADAHLLPATTV 449          
BLAST of CK936792 vs. ExPASy Swiss-Prot
Match: XSP1_ARATH (Xylem serine proteinase 1 OS=Arabidopsis thaliana GN=XSP1 PE=2 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 1.188e-42
Identity = 97/216 (44.91%), Postives = 134/216 (62.04%), Query Frame = 1
Query:   58 VVNGASLFGFASGTARGMAAQARVATYKVCWL-AGCFGSDILAGMDRAVEDGVNVLSMSIGGGLTDYYRDTVAIGAFTAMAQGIFVSCSAGNGGPYADSISNVAPWITTVGAGTLDRDFPTYVRLGNGKNFS--GVSLYSRRPSSGSMVPIVDAA-DVSSTSSGNLCMTGSLIPAKVAGKIVVCDRGGNSRVEKGVE--VKDAGGVGMILTNTDSY 687
            +V  ASL+G A+GTARG    AR+A YKVCW  +GC   DILAG + A+ DGV ++S+SIGG + DY  D++++G+F AM +GI    SAGN GP + +++N  PWI TV A  +DR F + + LGNGK+FS  G+S++S +  S  +V  VDAA +         C + SL   KV GK++VC  GG      GVE  +K  GG G I+  +D Y
Sbjct:  222 LVANASLYGIANGTARGAVPSARLAMYKVCWARSGCADMDILAGFEAAIHDGVEIISISIGGPIADYSSDSISVGSFHAMRKGILTVASAGNDGPSSGTVTNHEPWILTVAASGIDRTFKSKIDLGNGKSFSGMGISMFSPKAKSYPLVSGVDAAKNTDDKYLARYCFSDSLDRKKVKGKVMVCRMGGG-----GVESTIKSYGGAGAIIV-SDQY 431          
BLAST of CK936792 vs. ExPASy Swiss-Prot
Match: CUCM1_CUCME (Cucumisin OS=Cucumis melo PE=1 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 3.955e-38
Identity = 93/231 (40.26%), Postives = 137/231 (59.31%), Query Frame = 1
Query:   58 VVNGASLFGFASGTARGMAAQARVATYKVCWLAGCFGSDILAGMDRAVEDGVNVLSMSIGGGLT-DYYRDTVAIGAFTAMAQGIFVSCSAGNGGPYADSISNVAPWITTVGAGTLDRDFPTYVRLGNGKNFSGVSLYSRRPSSGSMVPIVDAADVSST----SSGNLCMTGSLIPAKVAGKIVVCDRG-GNSRVEKGVEVKDAGGVGMILT-NTDSYGEELVADAQLLPSA 729
            +V+ A+L+G   GTARG    AR+A YKVCW  GC  +DILA  D A+ DGV+++S+S+GG     Y+ D +AIG+F A+ +GI  S SAGNGGP   + ++++PW+ +V A T+DR F T V++GNG++F GVS+           P+V   D+ +T    S+   C   S+ P  + GKIVVC+   G     K ++    G  G+++T NT  Y     AD+  LPS+
Sbjct:  216 LVSQANLYGLGLGTARGGVPLARIAAYKVCWNDGCSDTDILAAYDDAIADGVDIISLSVGGANPRHYFVDAIAIGSFHAVERGILTSNSAGNGGPNFFTTASLSPWLLSVAASTMDRKFVTQVQIGNGQSFQGVSI---NTFDNQYYPLVSGRDIPNTGFDKSTSRFCTDKSVNPNLLKGKIVVCEASFGPHEFFKSLD----GAAGVLMTSNTRDY-----ADSYPLPSS 434          
The following BLAST results are available for this feature:
BLAST of CK936792 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
SUBL_ARATH1.936e-8568.58Subtilisin-like protease OS=Arabidopsis thaliana G... [more]
XSP1_ARATH1.188e-4244.91Xylem serine proteinase 1 OS=Arabidopsis thaliana ... [more]
CUCM1_CUCME3.955e-3840.26Cucumisin OS=Cucumis melo PE=1 SV=1[more]
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Properties
Property NameValue
Genbank descriptionCGF1004517_H04 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone F80DAB0002_IVF_H04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK936792 ID=CK936792; Name=CK936792; organism=Citrus sinensis; type=EST; length=736bp
GGGGCAAGAGATGATGATGGACATGGAACTCACACATCAACCACAGCAGC
TGGTTCAGTGGTCAACGGAGCAAGCCTATTTGGTTTTGCTTCAGGGACAG
CACGTGGAATGGCTGCACAAGCCCGGGTTGCCACATACAAGGTCTGTTGG
CTTGCCGGTTGTTTTGGTTCTGATATACTAGCAGGCATGGATAGGGCCGT
TGAAGATGGCGTGAATGTTCTATCCATGTCTATTGGGGGAGGACTAACAG
ATTACTACAGAGACACTGTTGCCATTGGAGCTTTCACTGCTATGGCACAG
GGAATTTTTGTTTCATGCTCAGCTGGAAATGGTGGGCCTTATGCAGACAG
CATATCCAACGTTGCACCTTGGATCACCACCGTAGGAGCTGGAACTTTGG
ACCGTGATTTCCCAACCTATGTTAGGCTTGGAAATGGAAAGAACTTCTCT
GGCGTCTCGCTTTATAGTAGGAGACCATCATCTGGTTCCATGGTGCCAAT
AGTTGATGCAGCAGATGTTAGTAGTACATCAAGTGGGAATCTCTGCATGA
CTGGCAGCTTGATTCCAGCAAAAGTTGCAGGAAAAATTGTGGTCTGTGAT
CGAGGGGGAAATTCGAGAGTGGAAAAGGGTGTGGAGGTGAAAGATGCTGG
CGGAGTTGGGATGATTTTAACCAACACTGATTCCTATGGAGAAGAATTAG
TTGCAGATGCACAGCTCTTGCCTTCAGCAAATGTAG
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