CN186865

Overview
NameCN186865
Unique NameCN186865
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length770
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1266 contig Csv1_Contig1266:176..945. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN186865 vs. ExPASy Swiss-Prot
Match: ADF2_PETHY (Actin-depolymerizing factor 2 OS=Petunia hybrida GN=ADF2 PE=2 SV=1)

HSP 1 Score: 246.128 bits (627), Expect = 1.563e-64
Identity = 120/136 (88.24%), Postives = 130/136 (95.59%), Query Frame = -1
Query:  363 ANAASGMAVDDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKLGEPSDSYENFTASLPADECRYAVYDFDFVTDENCQKSKIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVELQATDPTEMGLDVMRSR 770
            ANAASGMAV DDCKLKFLELKAKRTYRFI++KIEEKQK+VVVEKLGEP++SYE+FTA LPADECRYAVYDFDF+T EN QKS+I FIAWSPDT++VRSKMIYASSKDRFKRELDGIQVELQATDPTEMGLDV RSR
Sbjct:    2 ANAASGMAVHDDCKLKFLELKAKRTYRFIIYKIEEKQKEVVVEKLGEPTESYEDFTAGLPADECRYAVYDFDFMTKENHQKSRIFFIAWSPDTARVRSKMIYASSKDRFKRELDGIQVELQATDPTEMGLDVFRSR 137          
BLAST of CN186865 vs. ExPASy Swiss-Prot
Match: ADF1_PETHY (Actin-depolymerizing factor 1 OS=Petunia hybrida GN=ADF1 PE=2 SV=1)

HSP 1 Score: 241.891 bits (616), Expect = 2.949e-63
Identity = 117/138 (84.78%), Postives = 130/138 (94.20%), Query Frame = -1
Query:  357 ANAASGMAVDDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKLGEPSDSYENFTASLPADECRYAVYDFDFVTDENCQKSKIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVELQATDPTEMGLDVMRSRTN 770
            ANAASGMAV DDCKL+FLELKAKRT+RFIV+KIEEKQKQVVVEK+GEP++SYE+F ASLP +ECRYAVYDFDFVT ENCQKS+I FIAW PDT++VRSKMIYASSKDRFKRELDGIQVELQA DPTEMGLDV++SR N
Sbjct:    2 ANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVVVEKIGEPTESYEDFAASLPENECRYAVYDFDFVTAENCQKSRIFFIAWCPDTARVRSKMIYASSKDRFKRELDGIQVELQACDPTEMGLDVIQSRAN 139          
BLAST of CN186865 vs. ExPASy Swiss-Prot
Match: ADF4_ARATH (Actin-depolymerizing factor 4 OS=Arabidopsis thaliana GN=ADF4 PE=2 SV=2)

HSP 1 Score: 240.736 bits (613), Expect = 6.569e-63
Identity = 117/138 (84.78%), Postives = 128/138 (92.75%), Query Frame = -1
Query:  357 ANAASGMAVDDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKLGEPSDSYENFTASLPADECRYAVYDFDFVTDENCQKSKIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVELQATDPTEMGLDVMRSRTN 770
            ANAASGMAV DDCKL+FLELKAKRT+RFIV+KIEEKQKQV+VEK+GEP  +YE+F ASLPADECRYA+YDFDFVT ENCQKSKI FIAW PD +KVRSKMIYASSKDRFKRELDGIQVELQATDPTEM LDV++SR N
Sbjct:    2 ANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVIVEKVGEPILTYEDFAASLPADECRYAIYDFDFVTAENCQKSKIFFIAWCPDVAKVRSKMIYASSKDRFKRELDGIQVELQATDPTEMDLDVLKSRVN 139          
BLAST of CN186865 vs. ExPASy Swiss-Prot
Match: ADF7_ORYSJ (Actin-depolymerizing factor 7 OS=Oryza sativa subsp. japonica GN=ADF7 PE=3 SV=2)

HSP 1 Score: 240.35 bits (612), Expect = 8.579e-63
Identity = 114/138 (82.61%), Postives = 131/138 (94.93%), Query Frame = -1
Query:  357 ANAASGMAVDDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKLGEPSDSYENFTASLPADECRYAVYDFDFVTDENCQKSKIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVELQATDPTEMGLDVMRSRTN 770
            ANAASGMAVDD+CKLKFLELKAKRTYRFI++KI+EK+K VVVEK+GEP  +Y++F ASLPA+ECRYA++D+DFVT+ENCQKSKI FIAWSPDTS+VRSKMIYASSKDRFKRELDGIQVELQATDPTE+GLDV+R R N
Sbjct:    2 ANAASGMAVDDECKLKFLELKAKRTYRFIIYKIDEKKKMVVVEKVGEPVLNYDDFAASLPANECRYAIFDYDFVTEENCQKSKIFFIAWSPDTSRVRSKMIYASSKDRFKRELDGIQVELQATDPTEVGLDVIRGRAN 139          
BLAST of CN186865 vs. ExPASy Swiss-Prot
Match: ADF1_ARATH (Actin-depolymerizing factor 1 OS=Arabidopsis thaliana GN=ADF1 PE=1 SV=1)

HSP 1 Score: 239.195 bits (609), Expect = 1.911e-62
Identity = 117/138 (84.78%), Postives = 125/138 (90.58%), Query Frame = -1
Query:  357 ANAASGMAVDDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKLGEPSDSYENFTASLPADECRYAVYDFDFVTDENCQKSKIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVELQATDPTEMGLDVMRSRTN 770
            ANAASGMAV DDCKL+FLELKAKRT+RFIV+KIEEKQKQVVVEK+G+P  +YE F A LPADECRYA+YDFDFVT ENCQKSKI FIAW PD +KVRSKMIYASSKDRFKRELDGIQVELQATDPTEM LDV RSR N
Sbjct:    2 ANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVVVEKVGQPIQTYEEFAACLPADECRYAIYDFDFVTAENCQKSKIFFIAWCPDIAKVRSKMIYASSKDRFKRELDGIQVELQATDPTEMDLDVFRSRAN 139          
BLAST of CN186865 vs. ExPASy Swiss-Prot
Match: ADF2_ARATH (Actin-depolymerizing factor 2 OS=Arabidopsis thaliana GN=ADF2 PE=2 SV=1)

HSP 1 Score: 235.343 bits (599), Expect = 2.760e-61
Identity = 115/138 (83.33%), Postives = 126/138 (91.30%), Query Frame = -1
Query:  357 ANAASGMAVDDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKLGEPSDSYENFTASLPADECRYAVYDFDFVTDENCQKSKIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVELQATDPTEMGLDVMRSRTN 770
            ANAASGMAV DDCKLKF+ELKAKRT+R IV+KIE+KQ  V+VEKLGEP  SY++F ASLPAD+CRY +YDFDFVT ENCQKSKI FIAWSPDT+KVR KMIYASSKDRFKRELDGIQVELQATDPTEMGLDV +SRTN
Sbjct:    2 ANAASGMAVHDDCKLKFMELKAKRTFRTIVYKIEDKQ--VIVEKLGEPEQSYDDFAASLPADDCRYCIYDFDFVTAENCQKSKIFFIAWSPDTAKVRDKMIYASSKDRFKRELDGIQVELQATDPTEMGLDVFKSRTN 137          
BLAST of CN186865 vs. ExPASy Swiss-Prot
Match: ADF1_ORYSJ (Actin-depolymerizing factor 1 OS=Oryza sativa subsp. japonica GN=ADF1 PE=2 SV=1)

HSP 1 Score: 229.95 bits (585), Expect = 1.159e-59
Identity = 107/136 (78.68%), Postives = 129/136 (94.85%), Query Frame = -1
Query:  363 ANAASGMAVDDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKLGEPSDSYENFTASLPADECRYAVYDFDFVTDENCQKSKIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVELQATDPTEMGLDVMRSR 770
            +N+ASGMAV D+CKLKFLELKAKR++RFIVFKI EK +QVVV++LG+P +SY++FTA LPADECRYAV+DFDFVTDENCQKSKI FI+W+PDTS+VRSKM+YASSKDRFKRELDGIQVELQATDP+EM +D+++SR
Sbjct:    2 SNSASGMAVCDECKLKFLELKAKRSFRFIVFKINEKVQQVVVDRLGQPGESYDDFTACLPADECRYAVFDFDFVTDENCQKSKIFFISWAPDTSRVRSKMLYASSKDRFKRELDGIQVELQATDPSEMSMDIVKSR 137          
BLAST of CN186865 vs. ExPASy Swiss-Prot
Match: ADF10_ARATH (Actin-depolymerizing factor 10 OS=Arabidopsis thaliana GN=ADF10 PE=2 SV=1)

HSP 1 Score: 228.409 bits (581), Expect = 3.374e-59
Identity = 106/138 (76.81%), Postives = 124/138 (89.86%), Query Frame = -1
Query:  357 ANAASGMAVDDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKLGEPSDSYENFTASLPADECRYAVYDFDFVTDENCQKSKIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVELQATDPTEMGLDVMRSRTN 770
            AN+ASGM V D+CKLKFLELKAKR YRFIVFKI+EK +QV+++KLG P ++YE+FT S+P DECRYAVYD+DF T ENCQKSKI FIAWSPDTS+VRSKM+YASSKDRFKRELDGIQVELQATDP+EM LD+++ R N
Sbjct:    2 ANSASGMHVSDECKLKFLELKAKRNYRFIVFKIDEKAQQVMIDKLGNPEETYEDFTRSIPEDECRYAVYDYDFTTPENCQKSKIFFIAWSPDTSRVRSKMLYASSKDRFKRELDGIQVELQATDPSEMSLDIIKGRVN 139          
BLAST of CN186865 vs. ExPASy Swiss-Prot
Match: ADF8_ARATH (Actin-depolymerizing factor 8 OS=Arabidopsis thaliana GN=ADF8 PE=2 SV=2)

HSP 1 Score: 227.639 bits (579), Expect = 5.754e-59
Identity = 104/138 (75.36%), Postives = 127/138 (92.03%), Query Frame = -1
Query:  357 ANAASGMAVDDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKLGEPSDSYENFTASLPADECRYAVYDFDFVTDENCQKSKIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVELQATDPTEMGLDVMRSRTN 770
            AN+ASGM V+D+CK+KFLELKAKRTYRFIVFKI+EK +QV +EKLG P ++Y++FT+S+P DECRYAVYDFDF T++NCQKSKI FIAWSPDTS+VRSKM+YASSKDRFKRE++GIQVELQATDP+EM LD+++ R N
Sbjct:    2 ANSASGMHVNDECKIKFLELKAKRTYRFIVFKIDEKAQQVQIEKLGNPEETYDDFTSSIPDDECRYAVYDFDFTTEDNCQKSKIFFIAWSPDTSRVRSKMLYASSKDRFKREMEGIQVELQATDPSEMSLDIIKGRLN 139          
BLAST of CN186865 vs. ExPASy Swiss-Prot
Match: ADF_LILLO (Actin-depolymerizing factor OS=Lilium longiflorum PE=2 SV=1)

HSP 1 Score: 227.254 bits (578), Expect = 7.515e-59
Identity = 104/136 (76.47%), Postives = 128/136 (94.12%), Query Frame = -1
Query:  363 ANAASGMAVDDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKLGEPSDSYENFTASLPADECRYAVYDFDFVTDENCQKSKIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVELQATDPTEMGLDVMRSR 770
            AN++SGMAVDD+CKLKF+ELKAKR +RFIVFKIEEK +QV VE+LG+P++SY++FT  LP +ECRYAV+DFDFVTDENCQKSKI FI+WSPDTS+VRSKM+YAS+KDRFKRELDGIQVELQATDP+EM +D++++R
Sbjct:    2 ANSSSGMAVDDECKLKFMELKAKRNFRFIVFKIEEKVQQVTVERLGQPNESYDDFTECLPPNECRYAVFDFDFVTDENCQKSKIFFISWSPDTSRVRSKMLYASTKDRFKRELDGIQVELQATDPSEMSMDIIKAR 137          
The following BLAST results are available for this feature:
BLAST of CN186865 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 74
Match NameE-valueIdentityDescription
ADF2_PETHY1.563e-6488.24Actin-depolymerizing factor 2 OS=Petunia hybrida G... [more]
ADF1_PETHY2.949e-6384.78Actin-depolymerizing factor 1 OS=Petunia hybrida G... [more]
ADF4_ARATH6.569e-6384.78Actin-depolymerizing factor 4 OS=Arabidopsis thali... [more]
ADF7_ORYSJ8.579e-6382.61Actin-depolymerizing factor 7 OS=Oryza sativa subs... [more]
ADF1_ARATH1.911e-6284.78Actin-depolymerizing factor 1 OS=Arabidopsis thali... [more]
ADF2_ARATH2.760e-6183.33Actin-depolymerizing factor 2 OS=Arabidopsis thali... [more]
ADF1_ORYSJ1.159e-5978.68Actin-depolymerizing factor 1 OS=Oryza sativa subs... [more]
ADF10_ARATH3.374e-5976.81Actin-depolymerizing factor 10 OS=Arabidopsis thal... [more]
ADF8_ARATH5.754e-5975.36Actin-depolymerizing factor 8 OS=Arabidopsis thali... [more]
ADF_LILLO7.515e-5976.47Actin-depolymerizing factor OS=Lilium longiflorum ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0003I22_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0003I22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186865 ID=CN186865; Name=CN186865; organism=Citrus sinensis; type=EST; length=770bp
TTTTTTTTTTTTTATTTTTTTTTTTAAGAAATTGCATCCATAACAATTCA
TGTAACTGATGTATTACACTGATACTACTGCAAATAACCCAGTTGCAAGC
AATCAAAGCTAAAATGAGATATGTACCCCCCACAAACCATTATATATTAG
TCTGTAATTATCATCACACCATATGGGGATACTCACCCTATTAATCCACA
GATATAACAAATGAGAAGACAACTTAAAAAAGTATTTAACTCCGACCACA
AGCTGATAGCAAAGCAAGTTATAAGTCATAAAAGATATAGACATTACATT
TAAGTGAACAATATAGTATGGGCTTTCCATTGCACCATAGGCAAGTCTAA
AATTTAATTTGTGCGGCTTCTCATGACATCAAGACCCATCTCAGTAGGAT
CAGTAGCCTGCAACTCTACCTGAATTCCATCCAATTCTCTCTTGAACCTG
TCCTTGGAGCTAGCATAAATCATCTTGCTTCTCACCTTTGAGGTGTCGGG
GGACCATGCAATGAAAATAATCTTGCTCTTCTGGCAGTTCTCATCAGTCA
CAAAGTCAAAATCGTAGACAGCGTATCGGCACTCATCCGCTGGGAGGCTA
GCAGTGAAATTCTCATAACTATCAGATGGTTCACCAAGCTTCTCCACAAC
AACCTGCTTCTGCTTCTCTTCAATCTTGAAAACTATGAAGCGGTAAGTCC
TTTTTGCCTTCAATTCCAAAAACTTCAGCTTGCAGTCATCGTCGACTGCC
ATTCCAGATGCTGCATTTGC
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