CK936604
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK936604 vs. ExPASy Swiss-Prot
Match: COX10_MOUSE (Protoheme IX farnesyltransferase, mitochondrial OS=Mus musculus GN=Cox10 PE=2 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.528e-27 Identity = 66/137 (48.18%), Postives = 85/137 (62.04%), Query Frame = 2 Query: 359 LSKARLSMLVVATSGTGFALGSGSTIDLAGLCWTCTGTMMVAASANSLNQLFEISNDAKMKRTMRRPLPSGRISVRHAVTWASSVGVAGTALLAWKANMLTAGLAASNLILYAFVYTPLKQIHPVNTWVGAIVGAIP 769 LSK +L+ LVV+T+ GFAL G D + T GT + + +ANS+NQ FE+ D+ M RT RPL G+IS AV++A+ V G ALL W N LT L N+ LY YTPLK++ NTWVGA+VGAIP Sbjct: 159 LSKIKLTALVVSTTSAGFALAPGP-FDWSCFLLTSLGTGLASCAANSINQFFEVPFDSNMNRTKNRPLVRGQISPLLAVSFATCCAVPGVALLTWGVNPLTGALGVFNIFLYTCCYTPLKRVSITNTWVGAVVGAIP 294
BLAST of CK936604 vs. ExPASy Swiss-Prot
Match: COX10_HUMAN (Protoheme IX farnesyltransferase, mitochondrial OS=Homo sapiens GN=COX10 PE=1 SV=2) HSP 1 Score: 117.857 bits (294), Expect = 6.422e-26 Identity = 65/138 (47.10%), Postives = 84/138 (60.87%), Query Frame = 2 Query: 356 ELSKARLSMLVVATSGTGFALGSGSTIDLAGLCWTCTGTMMVAASANSLNQLFEISNDAKMKRTMRRPLPSGRISVRHAVTWASSVGVAGTALLAWKANMLTAGLAASNLILYAFVYTPLKQIHPVNTWVGAIVGAIP 769 +LSK +L+ LVV+T+ GFAL G D T GT + + +ANS+NQ FE+ D+ M RT RPL G+IS AV++A+ V G A+L N LT L N+ LY YTPLK+I NTWVGA+VGAIP Sbjct: 159 QLSKIKLTALVVSTTAAGFALAPGP-FDWPCFLLTSVGTGLASCAANSINQFFEVPFDSNMNRTKNRPLVRGQISPLLAVSFATCCAVPGVAILTLGVNPLTGALGLFNIFLYTCCYTPLKRISIANTWVGAVVGAIP 295
BLAST of CK936604 vs. ExPASy Swiss-Prot
Match: COX10_PONAB (Protoheme IX farnesyltransferase, mitochondrial OS=Pongo abelii GN=COX10 PE=2 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 1.095e-25 Identity = 65/137 (47.45%), Postives = 83/137 (60.58%), Query Frame = 2 Query: 359 LSKARLSMLVVATSGTGFALGSGSTIDLAGLCWTCTGTMMVAASANSLNQLFEISNDAKMKRTMRRPLPSGRISVRHAVTWASSVGVAGTALLAWKANMLTAGLAASNLILYAFVYTPLKQIHPVNTWVGAIVGAIP 769 LSK +L+ LVV+T+ GFAL G D T GT + + +ANS+NQ FE+ D+ M RT RPL G+IS AV++A+ V G A+L N LT L N+ LY YTPLK+I NTWVGA+VGAIP Sbjct: 160 LSKIKLTALVVSTTAAGFALAPGP-FDWPCFLLTSVGTGLASCAANSINQFFEVPFDSNMNRTKNRPLVRGQISPLLAVSFATCCAVPGVAILTLGVNPLTGALGLFNIFLYTCCYTPLKRISIANTWVGAVVGAIP 295
BLAST of CK936604 vs. ExPASy Swiss-Prot
Match: COX10_EMENI (Protoheme IX farnesyltransferase, mitochondrial OS=Emericella nidulans GN=cox10 PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.582e-24 Identity = 64/166 (38.55%), Postives = 93/166 (56.02%), Query Frame = 2 Query: 317 PFSLIRHYGRCYWELSKARLSMLVVATSGTGFALGSGSTI---------------DLAGLCWTCTGTMMVAASANSLNQLFEISNDAKMKRTMRRPLPSGRISVRHAVTWASSVGVAGTALLAWKANMLTAGLAASNLILYAFVYTPLKQIHPVNTWVGAIVGAIP 769 P + +R ++ L+K RLS LV+ ++ + + + S+I + TGT + A SAN+LN +FE DA+M RT RPL G ++ R AV +A + G LL + N GL+A+N+ LYAFVYTPLK++H +NTW+GAIVG IP Sbjct: 142 PKTSLRRKLAAFFALTKPRLSFLVLLSTTSAYGIYPVSSILALDPTIAPLPTLSTSTLTFLYLTTGTFLSACSANTLNMIFEPKYDAQMSRTRNRPLVRGLVTRRAAVFFAIATAAVGLGLLYFGTNPTVTGLSAANIALYAFVYTPLKRMHVINTWIGAIVGGIP 307
BLAST of CK936604 vs. ExPASy Swiss-Prot
Match: COX10_ASPFU (Protoheme IX farnesyltransferase, mitochondrial OS=Aspergillus fumigatus GN=cox10 PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.339e-23 Identity = 71/167 (42.51%), Postives = 91/167 (54.49%), Query Frame = 2 Query: 317 PFSLIRHYGRCYWELSKARLSMLVVATSGTGFA----------------LGSGSTIDLAGLCWTCTGTMMVAASANSLNQLFEISNDAKMKRTMRRPLPSGRISVRHAVTWASSVGVAGTALLAWKANMLTAGLAASNLILYAFVYTPLKQIHPVNTWVGAIVGAIP 769 P + +R + L+K RLS L+V T+ + + L + ST L L T TGT + + SAN+LN L E DA M RT RPL G +S R AV +A + AG LL N T L+ASN+ LYAFVYTPLK+I +NTWVGA+VG IP Sbjct: 150 PATSLRRKLAAFLALTKPRLSFLIVLTTTSAYGMYPISSLLTLDPSMTPLPTLSTSTLTFLYLT-TGTFLSSCSANTLNMLLEPKYDALMSRTRNRPLVRGLLSRRAAVLFAIATAAAGLGLLYIGTNPTTTALSASNICLYAFVYTPLKRISVINTWVGAVVGGIP 315
BLAST of CK936604 vs. ExPASy Swiss-Prot
Match: COX10_GIBZE (Protoheme IX farnesyltransferase, mitochondrial OS=Gibberella zeae GN=COX10 PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 2.284e-23 Identity = 69/159 (43.40%), Postives = 89/159 (55.97%), Query Frame = 2 Query: 326 LIRHYGRCYWELSKARLSMLVVATSGTGFALG------SGSTIDLAGLC-----WTCTGTMMVAASANSLNQLFEISNDAKMKRTMRRPLPSGRISVRHAVTWASSVGVAGTALLAWKANMLTAGLAASNLILYAFVYTPLKQIHPVNTWVGAIVGAIP 769 L RH C L+K RL+MLVV T+ +AL S ST + L + GT +ASAN+LN L+E S DAKM RT RPL IS R AV +A G GT L + N +GL +N+++YA +YTPLK + NTW+GA+VG IP Sbjct: 151 LRRHLSACL-SLAKPRLTMLVVLTAMATYALYPVPEMLSPSTTETPSLSPLTLLFLTIGTTFCSASANALNMLYEPSTDAKMTRTRNRPLVRNLISKRAAVLFAILSGFVGTGALYFGVNPTVSGLGFANIVIYAGMYTPLKAVTAFNTWIGAVVGGIP 308
BLAST of CK936604 vs. ExPASy Swiss-Prot
Match: COX10_SCHPO (Protoheme IX farnesyltransferase, mitochondrial OS=Schizosaccharomyces pombe GN=cox10 PE=2 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 8.679e-23 Identity = 57/140 (40.71%), Postives = 84/140 (60.00%), Query Frame = 2 Query: 350 YWELSKARLSMLVVATSGTGFALGSGSTIDLAGLCWTCTGTMMVAASANSLNQLFEISNDAKMKRTMRRPLPSGRISVRHAVTWASSVGVAGTALLAWKANMLTAGLAASNLILYAFVYTPLKQIHPVNTWVGAIVGAIP 769 + EL K RL++LVV ++ + +AL + L W GT + + SAN+ NQ E D +M RT RP+P G I +A +A+ G+AGT+ +++ N L N++LY +YTPLK+I VNTWVG++VGAIP Sbjct: 87 FLELGKPRLTVLVVLSTMSSYALAPYPGLSFNTLAWLTMGTALCSISANAFNQSMEPMLDCQMARTRSRPIPRGAIRPEYAWLFATLTGIAGTS-MSFLVNPTVGWLGLGNIVLYMGIYTPLKRISIVNTWVGSLVGAIP 225
BLAST of CK936604 vs. ExPASy Swiss-Prot
Match: COX10_NEUCR (Protoheme IX farnesyltransferase, mitochondrial OS=Neurospora crassa GN=cox-10 PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 3.298e-22 Identity = 65/151 (43.05%), Postives = 89/151 (58.94%), Query Frame = 2 Query: 359 LSKARLSMLVVATSGTGFALG------SGSTIDLA--------GLCWTCTGTMMVAASANSLNQLFEISNDAKMKRTMRRPLPSGRISVRHAVTWASSVGVAGTALLAWKANMLTAGLAASNLILYAFVYTPLKQIHPVNTWVGAIVGAIP 769 LSK RL++LVV ++ +AL + S +D + L + TGT + +ASAN+LN L+E D+KM RT RPL ++ + AV +A G+AGT L + N + L A+N+ LYA YTPLK+I VNTWVGAIVG IP Sbjct: 187 LSKPRLTVLVVLSAMVPYALYPVPSFLTSSALDTSLAPSLSPLTLLFLTTGTTLCSASANALNMLYEPDTDSKMTRTRTRPLVRRLLTTKAAVLFAVGCGLAGTLALYFGVNPTVSFLGAANIALYAGAYTPLKRISAVNTWVGAIVGGIP 337
BLAST of CK936604 vs. ExPASy Swiss-Prot
Match: COX10_YARLI (Protoheme IX farnesyltransferase, mitochondrial OS=Yarrowia lipolytica GN=COX10 PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.253e-21 Identity = 58/140 (41.43%), Postives = 84/140 (60.00%), Query Frame = 2 Query: 350 YWELSKARLSMLVVATSGTGFALGSGSTIDLAGLCWTCTGTMMVAASANSLNQLFEISNDAKMKRTMRRPLPSGRISVRHAVTWASSVGVAGTALLAWKANMLTAGLAASNLILYAFVYTPLKQIHPVNTWVGAIVGAIP 769 Y L+K RL++LVV ++ + +AL + + L L + GT + + SAN++N E + D+ M RT RP+ G ++ A T+A G GTA L + N A L ASN+ LY +YT LK+ H +NTWVGA+VGAIP Sbjct: 162 YVALTKPRLTVLVVLSAMSSYAL-TPEAVSLTNLLFLTVGTALCSGSANAINMGREPAYDSMMTRTRGRPVVRGAVTPNQAFTFAGITGTVGTAALYFGVNPTVAILGASNIALYGGLYTTLKRKHIINTWVGAVVGAIP 300
BLAST of CK936604 vs. ExPASy Swiss-Prot
Match: COXX_CYTH3 (Protoheme IX farnesyltransferase OS=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) GN=ctaB PE=3 SV=2) HSP 1 Score: 102.834 bits (255), Expect = 2.138e-21 Identity = 52/142 (36.62%), Postives = 83/142 (58.45%), Query Frame = 2 Query: 344 RCYWELSKARLSMLVVATSGTGFALGSGSTIDLAGLCWTCTGTMMVAASANSLNQLFEISNDAKMKRTMRRPLPSGRISVRHAVTWASSVGVAGTALLAWKANMLTAGLAASNLILYAFVYTPLKQIHPVNTWVGAIVGAIP 769 + Y++L+K RL+ V +SG G+ L +D L G + SAN +NQ+ E +D MKRT RPLP G I+V+ A+ ++ +AGT +LA + + L+ +L++Y+F+YTPLK + P+ ++GA GA P Sbjct: 6 QAYFKLTKFRLTSTVAFSSGMGYILAERGQVDWLNLVLFLIGGFSITVSANIINQIIERESDKLMKRTASRPLPEGIITVQQAIITSALFLIAGTVILAVYSTLNALILSLISLVIYSFIYTPLKTVSPIAVFIGAFPGAFP 147 The following BLAST results are available for this feature:
BLAST of CK936604 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 228
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Sequences
The
following sequences are available for this feature:
EST sequence >CK936604 ID=CK936604; Name=CK936604; organism=Citrus sinensis; type=EST; length=770bpback to top |