CN186830

Overview
NameCN186830
Unique NameCN186830
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length684
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3579 contig Csv1_Contig3579:175..859. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN186830 vs. ExPASy Swiss-Prot
Match: HSP11_SOYBN (17.3 kDa class I heat shock protein OS=Glycine max GN=HSP17.3-B PE=3 SV=1)

HSP 1 Score: 212.616 bits (540), Expect = 1.544e-54
Identity = 111/163 (68.10%), Postives = 122/163 (74.85%), Query Frame = 2
Query:   44 MSLIPSFFGNRRSSVFDPFSLDVWDPFRDXXXXXXXXXXXXXXXXXGEASAFVNTRVDWKETPEAHVFKADLPGLXXXXXXXXXXXXXXLQISGQRNIEKEDKSDTWHRVERSSGMFSRRFRLPENAKMDRIKASMENGVLTVTVPKAEEAKKANVRAIQISG 532
            MSLIPSFFG RRSSVFDPFSLDVWDPF+D                  E SAFV+TRVDWKETPEAHVFKAD+PGL              LQISG+RN+EKEDK+DTWHRVERSSG   RRFRLPENAK+D++KASMENGVLTVTVPK EE KK +V+AI ISG
Sbjct:    1 MSLIPSFFGGRRSSVFDPFSLDVWDPFKDFPFPSSLS---------AENSAFVSTRVDWKETPEAHVFKADIPGLKKEEVKLEIQDGRVLQISGERNVEKEDKNDTWHRVERSSGKLVRRFRLPENAKVDQVKASMENGVLTVTVPK-EEIKKPDVKAIDISG 153          
BLAST of CN186830 vs. ExPASy Swiss-Prot
Match: HSP16_SOYBN (18.5 kDa class I heat shock protein OS=Glycine max GN=HSP18.5-C PE=3 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 4.493e-54
Identity = 108/163 (66.26%), Postives = 124/163 (76.07%), Query Frame = 2
Query:   44 MSLIPSFFGNRRSSVFDPFSLDVWDPFRDXXXXXXXXXXXXXXXXXGEASAFVNTRVDWKETPEAHVFKADLPGLXXXXXXXXXXXXXXLQISGQRNIEKEDKSDTWHRVERSSGMFSRRFRLPENAKMDRIKASMENGVLTVTVPKAEEAKKANVRAIQISG 532
            MSLIP+FFG RR++VFDPFSLDVWDPF+D                  E SAFV+TRVDWKETPEAHVFKAD+PGL              LQISG+RN+EKEDK+DTWHRVERSSG F RRFRLPENAK++++KASMENGVLTVTVPK EE KK +V+AI+ISG
Sbjct:    1 MSLIPNFFGGRRNNVFDPFSLDVWDPFKDFPFPNTLSSASFPEFSR-ENSAFVSTRVDWKETPEAHVFKADIPGLKKEEVKVQIEDDKVLQISGERNVEKEDKNDTWHRVERSSGKFMRRFRLPENAKVEQVKASMENGVLTVTVPK-EEVKKPDVKAIEISG 161          
BLAST of CN186830 vs. ExPASy Swiss-Prot
Match: HSP14_SOYBN (17.5 kDa class I heat shock protein OS=Glycine max GN=HSP17.5-E PE=3 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 4.493e-54
Identity = 108/163 (66.26%), Postives = 123/163 (75.46%), Query Frame = 2
Query:   44 MSLIPSFFGNRRSSVFDPFSLDVWDPFRDXXXXXXXXXXXXXXXXXGEASAFVNTRVDWKETPEAHVFKADLPGLXXXXXXXXXXXXXXLQISGQRNIEKEDKSDTWHRVERSSGMFSRRFRLPENAKMDRIKASMENGVLTVTVPKAEEAKKANVRAIQISG 532
            MSLIP FFG RRS+VFDPFSLD+WDPF+D                  E SAFV+TRVDWKETPEAHVFKAD+PGL              LQISG+RN+EKEDK+DTWHRVERSSG F+RRFRLPENAK++ +KASMENGVLTVTVPK EE KK +V+AI+ISG
Sbjct:    1 MSLIPGFFGGRRSNVFDPFSLDMWDPFKDFHVPTSSVS--------AENSAFVSTRVDWKETPEAHVFKADIPGLKKEEVKVQIEDDRVLQISGERNVEKEDKNDTWHRVERSSGKFTRRFRLPENAKVNEVKASMENGVLTVTVPK-EEVKKPDVKAIEISG 154          
BLAST of CN186830 vs. ExPASy Swiss-Prot
Match: HSP13_SOYBN (17.5 kDa class I heat shock protein OS=Glycine max GN=HSP17.5-M PE=3 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 4.493e-54
Identity = 109/163 (66.87%), Postives = 123/163 (75.46%), Query Frame = 2
Query:   44 MSLIPSFFGNRRSSVFDPFSLDVWDPFRDXXXXXXXXXXXXXXXXXGEASAFVNTRVDWKETPEAHVFKADLPGLXXXXXXXXXXXXXXLQISGQRNIEKEDKSDTWHRVERSSGMFSRRFRLPENAKMDRIKASMENGVLTVTVPKAEEAKKANVRAIQISG 532
            MSLIPS FG RRS+VFDPFSLDVWDPF+D                  E SAFVNTRVDWKETPEAHVF+AD+PGL              LQISG+RN+EKEDK+DTWHRVERSSG F RRFRLPENAK++++KASMENGVLTVTVPK EE KK +V+AI+ISG
Sbjct:    1 MSLIPSIFGGRRSNVFDPFSLDVWDPFKDFHFPTSLS---------AENSAFVNTRVDWKETPEAHVFEADIPGLKKEEVKVQIEDDRVLQISGERNLEKEDKNDTWHRVERSSGNFMRRFRLPENAKVEQVKASMENGVLTVTVPK-EEVKKPDVKAIEISG 153          
BLAST of CN186830 vs. ExPASy Swiss-Prot
Match: HSP12_MEDSA (18.2 kDa class I heat shock protein OS=Medicago sativa GN=HSP18.2 PE=2 SV=1)

HSP 1 Score: 207.223 bits (526), Expect = 6.488e-53
Identity = 107/163 (65.64%), Postives = 120/163 (73.62%), Query Frame = 2
Query:   44 MSLIPSFFGNRRSSVFDPFSLDVWDPFRDXXXXXXXXXXXXXXXXXGEASAFVNTRVDWKETPEAHVFKADLPGLXXXXXXXXXXXXXXLQISGQRNIEKEDKSDTWHRVERSSGMFSRRFRLPENAKMDRIKASMENGVLTVTVPKAEEAKKANVRAIQISG 532
            MSLIPSFFG RRS+VFDPFSLDVWDPF+D                  E SAFV+TRVDWKETPEAHVFKADLPG+              LQISG+R++EKEDK+D WHR+ERSSG F RRFRLPENAKMD++KA+MENGVLTVTVPK EE KK  V+ I ISG
Sbjct:    1 MSLIPSFFGGRRSNVFDPFSLDVWDPFKDFPFNNSALSASFPR----ENSAFVSTRVDWKETPEAHVFKADLPGMKKEEVKVEIEDDRVLQISGERSVEKEDKNDQWHRLERSSGKFMRRFRLPENAKMDQVKAAMENGVLTVTVPK-EEVKKPEVKTIDISG 158          
BLAST of CN186830 vs. ExPASy Swiss-Prot
Match: HSP11_PEA (18.1 kDa class I heat shock protein OS=Pisum sativum GN=HSP18.1 PE=2 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 1.107e-52
Identity = 108/163 (66.26%), Postives = 120/163 (73.62%), Query Frame = 2
Query:   44 MSLIPSFFGNRRSSVFDPFSLDVWDPFRDXXXXXXXXXXXXXXXXXGEASAFVNTRVDWKETPEAHVFKADLPGLXXXXXXXXXXXXXXLQISGQRNIEKEDKSDTWHRVERSSGMFSRRFRLPENAKMDRIKASMENGVLTVTVPKAEEAKKANVRAIQISG 532
            MSLIPSFF  RRS+VFDPFSLDVWDP +D                  E  AFV+TRVDWKETPEAHVFKADLPGL              LQISG+R++EKEDK+D WHRVERSSG F RRFRLPENAKMD++KASMENGVLTVTVPK EE KKA V++I+ISG
Sbjct:    1 MSLIPSFFSGRRSNVFDPFSLDVWDPLKDFPFSNSSPSASFPR----ENPAFVSTRVDWKETPEAHVFKADLPGLKKEEVKVEVEDDRVLQISGERSVEKEDKNDEWHRVERSSGKFLRRFRLPENAKMDKVKASMENGVLTVTVPK-EEIKKAEVKSIEISG 158          
BLAST of CN186830 vs. ExPASy Swiss-Prot
Match: HS17B_ARATH (17.6 kDa class I heat shock protein 2 OS=Arabidopsis thaliana GN=HSP17.6B PE=2 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 1.224e-51
Identity = 105/164 (64.02%), Postives = 123/164 (75.00%), Query Frame = 2
Query:   44 MSLIPSFFGN-RRSSVFDPFSLDVWDPFRDXXXXXXXXXXXXXXXXXGEASAFVNTRVDWKETPEAHVFKADLPGLXXXXXXXXXXXXXXLQISGQRNIEKEDKSDTWHRVERSSGMFSRRFRLPENAKMDRIKASMENGVLTVTVPKAEEAKKANVRAIQISG 532
            MS+IPSFF N RRS++FDPFSLDVWDPF++                  E SA VN RVDW+ETPEAHVFKADLPGL              L+ISG+R++EKEDK+DTWHRVERSSG F+RRFRLPEN KMD++KA+MENGVLTVTVPKA E KKA+V++IQISG
Sbjct:    1 MSMIPSFFNNNRRSNIFDPFSLDVWDPFKELTSSSLSR----------ENSAIVNARVDWRETPEAHVFKADLPGLKKEEVKVEIEEDSVLKISGERHVEKEDKNDTWHRVERSSGQFTRRFRLPENVKMDQVKAAMENGVLTVTVPKA-ETKKADVKSIQISG 153          
BLAST of CN186830 vs. ExPASy Swiss-Prot
Match: HSP12_SOLPE (17.6 kDa class I heat shock protein OS=Solanum peruvianum PE=2 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 2.087e-51
Identity = 106/164 (64.63%), Postives = 121/164 (73.78%), Query Frame = 2
Query:   44 MSLIPSFFGNRRS-SVFDPFSLDVWDPFRDXXXXXXXXXXXXXXXXXGEASAFVNTRVDWKETPEAHVFKADLPGLXXXXXXXXXXXXXXLQISGQRNIEKEDKSDTWHRVERSSGMFSRRFRLPENAKMDRIKASMENGVLTVTVPKAEEAKKANVRAIQISG 532
            MSLIP  FG+RRS SVFDPFS+DV+DPF++                 GE SAF NTR+DWKETPEAHVFKADLPGL              LQISG+RN+EKEDK+DTWHRVERSSG F RRFRLPENAKMD++KASMENGVLTVTVPK EE    +V++I+ISG
Sbjct:    1 MSLIPRIFGDRRSTSVFDPFSIDVFDPFKELGFTVSNS---------GETSAFANTRIDWKETPEAHVFKADLPGLKKEEVKVEVEEDRVLQISGERNVEKEDKNDTWHRVERSSGKFMRRFRLPENAKMDQVKASMENGVLTVTVPK-EEVNNPDVKSIEISG 154          
BLAST of CN186830 vs. ExPASy Swiss-Prot
Match: HS178_ARATH (17.8 kDa class I heat shock protein OS=Arabidopsis thaliana GN=HSP17.8 PE=2 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 6.073e-51
Identity = 104/166 (62.65%), Postives = 120/166 (72.29%), Query Frame = 2
Query:   44 MSLIPSFFGNRR--SSVFDPFSLDVWDPFRDXXXXXXXXXXXXXXXXXGEASAFVNTRVDWKETPEAHVFKADLPGLXXXXXXXXXXXXXXLQISGQRNIEKEDKSDTWHRVERSSGMFSRRFRLPENAKMDRIKASMENGVLTVTVPKAEEA-KKANVRAIQISG 532
            MSLIPSFFGN R  +S+FDPFSLDVWDPF++                 GE SA  N RVDWKET EAHVFKADLPG+              L+ISG+R++EKE+K DTWHRVERSSG FSR+F+LPEN KMD++KASMENGVLTVTVPK EEA KKA V++I ISG
Sbjct:    1 MSLIPSFFGNNRRSNSIFDPFSLDVWDPFKELQFPSSLS---------GETSAITNARVDWKETAEAHVFKADLPGMKKEEVKVEIEDDSVLKISGERHVEKEEKQDTWHRVERSSGQFSRKFKLPENVKMDQVKASMENGVLTVTVPKVEEAKKKAQVKSIDISG 157          
BLAST of CN186830 vs. ExPASy Swiss-Prot
Match: HSP15_SOYBN (17.6 kDa class I heat shock protein OS=Glycine max GN=HSP17.6-L PE=3 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 1.353e-50
Identity = 102/163 (62.58%), Postives = 119/163 (73.01%), Query Frame = 2
Query:   44 MSLIPSFFGNRRSSVFDPFSLDVWDPFRDXXXXXXXXXXXXXXXXXGEASAFVNTRVDWKETPEAHVFKADLPGLXXXXXXXXXXXXXXLQISGQRNIEKEDKSDTWHRVERSSGMFSRRFRLPENAKMDRIKASMENGVLTVTVPKAEEAKKANVRAIQISG 532
            MSLIPS FG  RS+VFDPFSLD+WDPF+D                  E SAFVNTRVDWKET EAHV KAD+PGL              LQISG+RN+EKEDK+DTWHRV+RSSG F RRFRLPENAK++++KA MENGVLTVT+PK EE KK++V+ I+ISG
Sbjct:    1 MSLIPSIFGGPRSNVFDPFSLDMWDPFKDFHVPTSSVS--------AENSAFVNTRVDWKETQEAHVLKADIPGLKKEEVKVQIEDDRVLQISGERNVEKEDKNDTWHRVDRSSGKFMRRFRLPENAKVEQVKACMENGVLTVTIPK-EEVKKSDVKPIEISG 154          
The following BLAST results are available for this feature:
BLAST of CN186830 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 55
Match NameE-valueIdentityDescription
HSP11_SOYBN1.544e-5468.1017.3 kDa class I heat shock protein OS=Glycine max... [more]
HSP16_SOYBN4.493e-5466.2618.5 kDa class I heat shock protein OS=Glycine max... [more]
HSP14_SOYBN4.493e-5466.2617.5 kDa class I heat shock protein OS=Glycine max... [more]
HSP13_SOYBN4.493e-5466.8717.5 kDa class I heat shock protein OS=Glycine max... [more]
HSP12_MEDSA6.488e-5365.6418.2 kDa class I heat shock protein OS=Medicago sa... [more]
HSP11_PEA1.107e-5266.2618.1 kDa class I heat shock protein OS=Pisum sativ... [more]
HS17B_ARATH1.224e-5164.0217.6 kDa class I heat shock protein 2 OS=Arabidops... [more]
HSP12_SOLPE2.087e-5164.6317.6 kDa class I heat shock protein OS=Solanum per... [more]
HS178_ARATH6.073e-5162.6517.8 kDa class I heat shock protein OS=Arabidopsis... [more]
HSP15_SOYBN1.353e-5062.5817.6 kDa class I heat shock protein OS=Glycine max... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0003I02_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0003I02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186830 ID=CN186830; Name=CN186830; organism=Citrus sinensis; type=EST; length=684bp
ATTGAAAGAGAGAGGGAAAACAAAAAAAGGAAAGATAAGGAAAATGTCGC
TGATTCCAAGCTTCTTCGGCAACCGACGCAGCAGTGTGTTCGATCCGTTC
TCACTCGACGTTTGGGATCCATTCAGGGACTTCCCTCTCTCTGCTTCTTC
TTTTCCATCTGCGGTGTCCTCTCAGTTCCCTGGAGAAGCCTCTGCTTTCG
TTAATACCCGCGTGGACTGGAAGGAAACCCCAGAGGCCCACGTGTTCAAG
GCTGATCTTCCGGGGCTAAGGAAAGAGGAGGTGAAGGTCGAGGTTGAGGA
TGACAGGGTGCTTCAGATAAGCGGGCAGAGGAACATTGAGAAGGAAGACA
AGAGCGACACGTGGCATCGCGTGGAGCGTAGCAGTGGCATGTTCTCGAGG
AGGTTCAGGCTGCCGGAGAATGCGAAGATGGACCGCATTAAGGCTTCAAT
GGAGAACGGTGTGCTTACTGTTACCGTTCCTAAAGCGGAGGAGGCCAAGA
AAGCTAATGTCAGGGCTATTCAAATCTCTGGCTGACTAATTAATAAACAA
AGACAATAAATAATTGTATGATAAGTTTTATGGTTTGGTTTGGTCTATGT
ATCATGTGAAGTCTGTCTTTGTCTACTGAGATCGAGTGTCTTTGTTTGTA
ATGGGAATGTCAGAATGGGAATAATAATGTAATT
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