CN186821
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN186821 vs. ExPASy Swiss-Prot
Match: RING1_ARATH (E3 ubiquitin-protein ligase At1g12760 OS=Arabidopsis thaliana GN=At1g12760 PE=2 SV=1) HSP 1 Score: 170.244 bits (430), Expect = 1.029e-41 Identity = 78/102 (76.47%), Postives = 87/102 (85.29%), Query Frame = -1 Query: 443 KFKFRRMVDTEK-LSDDGQGSQGGIMTECGTETPNEHVLSNEDAECCICLSAYDDGVELRELPCGHHFHCACVDKWLYINATCPLCKYNILKSSSNQDREEV 745 KFKFR++ D K +D+ QG+ GIMTECGT++P EH L EDAECCICLSAY+DG ELRELPCGHHFHC+CVDKWLYINATCPLCKYNILK SSN DREEV Sbjct: 308 KFKFRKLGDANKHTNDEAQGTTEGIMTECGTDSPIEHTLLQEDAECCICLSAYEDGTELRELPCGHHFHCSCVDKWLYINATCPLCKYNILK-SSNLDREEV 408
BLAST of CN186821 vs. ExPASy Swiss-Prot
Match: RING2_ARATH (E3 ubiquitin-protein ligase At1g63170 OS=Arabidopsis thaliana GN=At1g63170 PE=2 SV=2) HSP 1 Score: 169.088 bits (427), Expect = 2.292e-41 Identity = 76/104 (73.08%), Postives = 87/104 (83.65%), Query Frame = -1 Query: 443 KFKFRRMVDTEKLSDD---GQGSQGGIMTECGTETPNEHVLSNEDAECCICLSAYDDGVELRELPCGHHFHCACVDKWLYINATCPLCKYNILKSSSNQDREEV 745 KFKFR++ DT K + D GQG GG+MTECGT++P EH L +EDAECCICLSAY+D ELRELPCGHHFHC CVDKWLYINATCPLCKYNILKSS+ ++ EEV Sbjct: 278 KFKFRKVGDTMKHTVDEEQGQGDSGGVMTECGTDSPVEHALPHEDAECCICLSAYEDETELRELPCGHHFHCGCVDKWLYINATCPLCKYNILKSSNYEEGEEV 381
BLAST of CN186821 vs. ExPASy Swiss-Prot
Match: RING4_ARATH (E3 ubiquitin-protein ligase At4g11680 OS=Arabidopsis thaliana GN=At4g11680 PE=2 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 3.000e-33 Identity = 62/96 (64.58%), Postives = 76/96 (79.17%), Query Frame = -1 Query: 458 KFKFRRMVDTEKLSDDGQGSQGGIMTECGTETPNEHVLSNEDAECCICLSAYDDGVELRELPCGHHFHCACVDKWLYINATCPLCKYNILKSSSNQ 745 KF+F + + EKLS G GIMTECGT++P E LS EDAECCICL Y+DGVELRELPC HHFHC C+DKWL+IN+ CPLCK+NILK+++N+ Sbjct: 298 KFRFTKTGNVEKLS----GKARGIMTECGTDSPIERSLSPEDAECCICLCEYEDGVELRELPCNHHFHCTCIDKWLHINSRCPLCKFNILKNANNE 389
BLAST of CN186821 vs. ExPASy Swiss-Prot
Match: ZNRF3_HUMAN (Zinc/RING finger protein 3 OS=Homo sapiens GN=ZNRF3 PE=2 SV=3) HSP 1 Score: 72.7886 bits (177), Expect = 2.236e-12 Identity = 34/88 (38.64%), Postives = 50/88 (56.82%), Query Frame = -1 Query: 461 VDTEKLSDDGQGSQGGIMTECGTETPNEHVLSNEDAECCICLSAYDDGVELRELPCGHHFHCACVDKWLYINATCPLCKYNILKSSSN 724 ++T K + +G + G CG + + S+ ++C ICL Y DG ELR +PC H FH CVD WL + TCP C++NI++ N Sbjct: 262 METRKFNSKSKGRREG---SCGAL---DTLSSSSTSDCAICLEKYIDGEELRVIPCTHRFHRKCVDPWLLQHHTCPHCRHNIIEQKGN 343
BLAST of CN186821 vs. ExPASy Swiss-Prot
Match: ZNRF3_MOUSE (Zinc/RING finger protein 3 OS=Mus musculus GN=Znrf3 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.920e-12 Identity = 34/88 (38.64%), Postives = 49/88 (55.68%), Query Frame = -1 Query: 461 VDTEKLSDDGQGSQGGIMTECGTETPNEHVLSNEDAECCICLSAYDDGVELRELPCGHHFHCACVDKWLYINATCPLCKYNILKSSSN 724 ++T K + +G + G CG + + S ++C ICL Y DG ELR +PC H FH CVD WL + TCP C++NI++ N Sbjct: 259 METRKFNSKSKGRREG---SCGAL---DTLSSGSTSDCAICLEKYIDGEELRVIPCTHRFHRKCVDPWLLQHHTCPHCRHNIIEQKGN 340
BLAST of CN186821 vs. ExPASy Swiss-Prot
Match: ATL3D_ARATH (RING-H2 finger protein ATL3D OS=Arabidopsis thaliana GN=ATL3D PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.892e-11 Identity = 27/62 (43.55%), Postives = 41/62 (66.13%), Query Frame = -1 Query: 461 EHVLSNEDAECCICLSAYDDGVELRELP-CGHHFHCACVDKWLYINATCPLCKYNILKSSSN 643 E E+ ECCICL +++G +++ LP C H +HC CVD+WL ++CPLC+ +I SS+ Sbjct: 97 ERAEEEEEKECCICLGGFEEGEKMKVLPPCSHCYHCECVDRWLKTESSCPLCRVSIRVDSSS 158
BLAST of CN186821 vs. ExPASy Swiss-Prot
Match: RNF13_CHICK (RING finger protein 13 OS=Gallus gallus GN=RNF13 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.506e-11 Identity = 28/56 (50.00%), Postives = 35/56 (62.50%), Query Frame = -1 Query: 449 CCICLSAYDDGVELRELPCGHHFHCACVDKWL-YINATCPLCKYNILKSSSNQDRE 613 C ICL Y+DG +LR LPC H +HC CVD WL TCP+CK ++ S + D E Sbjct: 240 CAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKKTCPVCKQKVVPSQGDSDSE 295
BLAST of CN186821 vs. ExPASy Swiss-Prot
Match: ATL4O_ARATH (RING-H2 finger protein ATL4O OS=Arabidopsis thaliana GN=ATL4O PE=2 SV=2) HSP 1 Score: 67.781 bits (164), Expect = 7.191e-11 Identity = 33/95 (34.74%), Postives = 50/95 (52.63%), Query Frame = -1 Query: 446 SDDGQGSQGGIMTECGTETP-------NEHVLSNEDAECCICLSAYDDGVELRELP-CGHHFHCACVDKWLYINATCPLCKYNILKSSSNQDREE 706 ++DG +GG+ P E + ++D EC ICL+ +D +R LP C H FH C+D WLY +ATCP+C+ N+ S+ E+ Sbjct: 85 ANDGSSRRGGLDNAVVESFPVFAYSSVKESKIGSKDLECAICLNELEDHETVRLLPICNHLFHIDCIDTWLYSHATCPVCRSNLTAKSNKPGDED 179 The following BLAST results are available for this feature:
BLAST of CN186821 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN186821 ID=CN186821; Name=CN186821; organism=Citrus sinensis; type=EST; length=745bpback to top |