CN186809

Overview
NameCN186809
Unique NameCN186809
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length754
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CN186809 vs. ExPASy Swiss-Prot
Match: KING1_ARATH (SNF1-related protein kinase regulatory subunit gamma 1 OS=Arabidopsis thaliana GN=KING1 PE=1 SV=2)

HSP 1 Score: 223.402 bits (568), Expect = 1.039e-57
Identity = 104/144 (72.22%), Postives = 127/144 (88.19%), Query Frame = -3 
Query:  321 FKLMRRKKIGGIPVVEKGGNKAVGNISLRDIQFLLTAPEIYHDYRSITAKNFLTAVRKYMEEHHHEDSPLLSGMVTCSRNHTIKELIHLLDSKKIHRIYVVDFNGNLEGVITLRDIISRLVHEPPGYFGDFFDGVLPLPENSRV 752
            FKLMRRK+IGGIPV+E+   K VGNISLRD+QFLLTAPEIYHDYRSIT KNFL +VR+++E+     +P++SG++ C++NHT+KELI +LD++KIHRIYVVD  GNLEG+ITLRDII+RLVHEP GYFGDFFDGV+PLPEN RV
Sbjct:  281 FKLMRRKRIGGIPVIERNSEKPVGNISLRDVQFLLTAPEIYHDYRSITTKNFLVSVREHLEKCGDTSAPIMSGVIACTKNHTLKELILMLDAEKIHRIYVVDDFGNLEGLITLRDIIARLVHEPSGYFGDFFDGVMPLPENYRV 424
The following BLAST results are available for this feature:
BLAST of CN186809 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
KING1_ARATH1.039e-5772.22SNF1-related protein kinase regulatory subunit gam... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS05_0003H15_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0003H15, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186809 ID=CN186809; Name=CN186809; organism=Citrus sinensis; type=EST; length=754bp
CCCAGTAGGAAATGCACAAAATACCGCAGGCCTGACTTATTTTTTCTCAT
GAAAAAACTAACCATTGGTATCCAAAGGAACCATTAAAGTGTTCCAATTA
TTAGACTAATTTACAGAAAGGGACTAACATGGGTTTGGTGGATACAGAAA
CTGAGAAACATGTACAGAAGATCTAACTCAGCTAAGCAAGATGGTTTTCT
ATTACATCAGCATGAAATAAACTACGTTACAATCACTGCATCCAACCAGT
CTCCGACACACCAACATCAGACAGAAGCAAATGATCAGTTGCTGAAAACA
TGAGGGGCTTGTTACCTTTAGACCCTGCTATTCTCAGGCAATGGCAAGAC
TCCATCGAAGAAATCACCAAAGTAGCCTGGAGGCTCGTGTACTAGCCTTG
AGATGATGTCTCTCAATGTGATCACACCTTCCAAATTCCCATTAAAATCC
ACCACATAAATTCGATGAATTTTTTTGGAATCAAGCAGATGGATTAATTC
CTTTATTGTGTGGTTTCTGCTGCATGTTACCATGCCACTTAACAATGGTG
AGTCCTCATGATGATGTTCTTCCATGTACTTTCTAACTGCTGTCAGGAAG
TTCTTAGCAGTGATAGATCTATAATCGTGATAGATCTCTGGTGCAGTTAA
AAGGAACTGAATATCTCTCAGGCTTATATTACCCACGGCCTTATTACCGC
CTTTTTCAACAACAGGTATGCCTCCAATTTTCTTTCTCCTCATCAACTTA
AATG
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