CN186805

Overview
NameCN186805
Unique NameCN186805
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length667
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN186805 vs. ExPASy Swiss-Prot
Match: FNRL2_ARATH (Ferredoxin--NADP reductase, leaf isozyme 2, chloroplastic OS=Arabidopsis thaliana GN=LFNR2 PE=1 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 1.947e-22
Identity = 47/51 (92.16%), Postives = 50/51 (98.04%), Query Frame = 1
Query:  259 KDNTYVYMCGLRGMEKGIDDIMVSLAANDGIDWLDYKKQLKKSEQWNVEVY 411
            KDNT+VYMCGL+GMEKGIDDIMVSLAANDGIDW DYKKQLKK+EQWNVEVY
Sbjct:  319 KDNTFVYMCGLKGMEKGIDDIMVSLAANDGIDWFDYKKQLKKAEQWNVEVY 369          
BLAST of CN186805 vs. ExPASy Swiss-Prot
Match: FENR_MESCR (Ferredoxin--NADP reductase, chloroplastic OS=Mesembryanthemum crystallinum GN=PETH PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 3.320e-22
Identity = 47/51 (92.16%), Postives = 49/51 (96.08%), Query Frame = 1
Query:  259 KDNTYVYMCGLRGMEKGIDDIMVSLAANDGIDWLDYKKQLKKSEQWNVEVY 411
            KDNTYVYMCGL+GMEKGIDDIMVSLAA DGIDW DYKKQLKK+EQWNVEVY
Sbjct:  315 KDNTYVYMCGLKGMEKGIDDIMVSLAAEDGIDWFDYKKQLKKAEQWNVEVY 365          
BLAST of CN186805 vs. ExPASy Swiss-Prot
Match: FNRL1_ARATH (Ferredoxin--NADP reductase, leaf isozyme 1, chloroplastic OS=Arabidopsis thaliana GN=LFNR1 PE=1 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 9.660e-22
Identity = 46/51 (90.20%), Postives = 50/51 (98.04%), Query Frame = 1
Query:  259 KDNTYVYMCGLRGMEKGIDDIMVSLAANDGIDWLDYKKQLKKSEQWNVEVY 411
            KDNT+VYMCGL+GMEKGIDDIMVSLAA DGIDWL+YKKQLK+SEQWNVEVY
Sbjct:  310 KDNTFVYMCGLKGMEKGIDDIMVSLAAKDGIDWLEYKKQLKRSEQWNVEVY 360          
BLAST of CN186805 vs. ExPASy Swiss-Prot
Match: FENR1_ORYSJ (Ferredoxin--NADP reductase, leaf isozyme, chloroplastic OS=Oryza sativa subsp. japonica GN=Os06g0107700 PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.152e-21
Identity = 46/51 (90.20%), Postives = 48/51 (94.12%), Query Frame = 1
Query:  259 KDNTYVYMCGLRGMEKGIDDIMVSLAANDGIDWLDYKKQLKKSEQWNVEVY 411
            KD+TYVYMCGL+GMEKGIDDIMVSLAA DGIDW DYKKQLKK EQWNVEVY
Sbjct:  312 KDHTYVYMCGLKGMEKGIDDIMVSLAAKDGIDWADYKKQLKKGEQWNVEVY 362          
BLAST of CN186805 vs. ExPASy Swiss-Prot
Match: FENR1_PEA (Ferredoxin--NADP reductase, leaf isozyme, chloroplastic OS=Pisum sativum GN=PETH PE=1 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.822e-20
Identity = 43/51 (84.31%), Postives = 49/51 (96.08%), Query Frame = 1
Query:  259 KDNTYVYMCGLRGMEKGIDDIMVSLAANDGIDWLDYKKQLKKSEQWNVEVY 411
            KDNT+VYMCGL+GMEKGIDDIMVSLAA DGIDW++YK+ LKK+EQWNVEVY
Sbjct:  310 KDNTFVYMCGLKGMEKGIDDIMVSLAAKDGIDWIEYKRTLKKAEQWNVEVY 360          
BLAST of CN186805 vs. ExPASy Swiss-Prot
Match: FENR_SPIOL (Ferredoxin--NADP reductase, chloroplastic OS=Spinacia oleracea GN=PETH PE=1 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 2.379e-20
Identity = 43/51 (84.31%), Postives = 49/51 (96.08%), Query Frame = 1
Query:  259 KDNTYVYMCGLRGMEKGIDDIMVSLAANDGIDWLDYKKQLKKSEQWNVEVY 411
            KDNTY YMCGL+GMEKGIDDIMVSLAA +GIDW++YK+QLKK+EQWNVEVY
Sbjct:  319 KDNTYFYMCGLKGMEKGIDDIMVSLAAAEGIDWIEYKRQLKKAEQWNVEVY 369          
BLAST of CN186805 vs. ExPASy Swiss-Prot
Match: FENR_VICFA (Ferredoxin--NADP reductase, chloroplastic OS=Vicia faba GN=PETH PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 4.487e-19
Identity = 40/51 (78.43%), Postives = 47/51 (92.16%), Query Frame = 1
Query:  259 KDNTYVYMCGLRGMEKGIDDIMVSLAANDGIDWLDYKKQLKKSEQWNVEVY 411
            KDNT+VYMCGL+GMEKGIDDIMVS+   DGIDW++YK+ LKK+EQWNVEVY
Sbjct:  313 KDNTFVYMCGLKGMEKGIDDIMVSIRPKDGIDWIEYKRTLKKAEQWNVEVY 363          
BLAST of CN186805 vs. ExPASy Swiss-Prot
Match: FENR1_TOBAC (Ferredoxin--NADP reductase, leaf-type isozyme, chloroplastic OS=Nicotiana tabacum GN=PETH PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 6.480e-18
Identity = 39/51 (76.47%), Postives = 46/51 (90.20%), Query Frame = 1
Query:  259 KDNTYVYMCGLRGMEKGIDDIMVSLAANDGIDWLDYKKQLKKSEQWNVEVY 411
            KDNT++YMCGL+GME+GID+IM +LA  DGI W DYKKQLKK+EQWNVEVY
Sbjct:  312 KDNTFIYMCGLKGMEQGIDEIMSALAERDGIVWADYKKQLKKAEQWNVEVY 362          
BLAST of CN186805 vs. ExPASy Swiss-Prot
Match: MT3_CARPA (Metallothionein-like protein type 3 OS=Carica papaya PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.144e-14
Identity = 34/53 (64.15%), Postives = 42/53 (79.25%), Query Frame = -1
Query:  101 SQCVKKGSSYAADFVETDLSFVSTVVVMDVQAAETEGNCKCGPTCACVNCTCG 259
            +QCVKKGSSY AD +ET+ S ++  VVMD  AAE +G CKCGP+C+C NCTCG
Sbjct:   14 TQCVKKGSSYTADIIETEKSIMT--VVMDAPAAENDGKCKCGPSCSCTNCTCG 64          
BLAST of CN186805 vs. ExPASy Swiss-Prot
Match: MT3_MUSAC (Metallothionein-like protein type 3 OS=Musa acuminata PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 5.313e-12
Identity = 31/54 (57.41%), Postives = 39/54 (72.22%), Query Frame = -1
Query:   98 SQCVKKGSSYAADFVETDLSFVSTVVVMDVQAAETEGNCKCGPTCACVNCTCGS 259
            SQCVKKG+SY  D VET+ S+V  V+V   +AAE +G CKCG  CAC +C CG+
Sbjct:   13 SQCVKKGNSYGIDIVETEKSYVDEVIVA-AEAAEHDGKCKCGAACACTDCKCGN 65          
The following BLAST results are available for this feature:
BLAST of CN186805 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
FNRL2_ARATH1.947e-2292.16Ferredoxin--NADP reductase, leaf isozyme 2, chloro... [more]
FENR_MESCR3.320e-2292.16Ferredoxin--NADP reductase, chloroplastic OS=Mesem... [more]
FNRL1_ARATH9.660e-2290.20Ferredoxin--NADP reductase, leaf isozyme 1, chloro... [more]
FENR1_ORYSJ2.152e-2190.20Ferredoxin--NADP reductase, leaf isozyme, chloropl... [more]
FENR1_PEA1.822e-2084.31Ferredoxin--NADP reductase, leaf isozyme, chloropl... [more]
FENR_SPIOL2.379e-2084.31Ferredoxin--NADP reductase, chloroplastic OS=Spina... [more]
FENR_VICFA4.487e-1978.43Ferredoxin--NADP reductase, chloroplastic OS=Vicia... [more]
FENR1_TOBAC6.480e-1876.47Ferredoxin--NADP reductase, leaf-type isozyme, chl... [more]
MT3_CARPA1.144e-1464.15Metallothionein-like protein type 3 OS=Carica papa... [more]
MT3_MUSAC5.313e-1257.41Metallothionein-like protein type 3 OS=Musa acumin... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS05_0003H13_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0003H13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186805 ID=CN186805; Name=CN186805; organism=Citrus sinensis; type=EST; length=667bp
TTTTTTTTTACTCACCCTTACATTATTCTTAACCCCCACAATATTTAGGC
ACACTTGCAGCTTCTTATTTTTTGCTGCATGTGTTTGCTTATTAGTGACT
ACCACAAGTGCAGTTCACACAAGCGCAGGTGGGGCCGCACTTGCAGTTAC
CTTCAGTCTCAGCAGCCTGAACGTCCATGACAACAACGGTGCTGACAAAG
CTCAAGTCAGTCTCGACGAAGTCAGCAGCATAGCTGCTTCCCTTCTTCAC
ACACTGGGAAAGATAACACTTATGTGTACATGTGTGGGTTGAGAGGCATG
GAGAAGGGAATCGATGACATTATGGTGTCATTGGCTGCTAACGATGGCAT
TGATTGGCTGGACTACAAAAAGCAATTGAAGAAATCTGAGCAATGGAATG
TTGAAGTCTACTAATGCCTTACATGTACAAAACATCCCTCACATTTTCAT
TTTTTTTTCCTTTTTGTCCCATCGTATGATATTTCCCTCTGCACTGTGTA
CATAGGTAGACTATTTTCAAATTTTCTTTGTATTTTTGTCTTTTTTAACG
GAGCAATTTACGGCTATTGTCTCTACAGATTTTTATTCTTGAGGGATCAT
GTATCTTGCAAATATATTTGGAGGCAATTCAACTTGCTCAATTTTAGCTT
TCAAAAAAAAAAAAAAA
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