CK936530

Overview
NameCK936530
Unique NameCK936530
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length697
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13608 contig Csv1_Contig13608:47..743. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK936530 vs. ExPASy Swiss-Prot
Match: CADH1_ARACO (Probable cinnamyl alcohol dehydrogenase 1 OS=Aralia cordata GN=CAD1 PE=2 SV=1)

HSP 1 Score: 278.87 bits (712), Expect = 1.832e-74
Identity = 138/214 (64.49%), Postives = 151/214 (70.56%), Query Frame = 2
Query:   59 MGSLDTERAAMGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMXXXXXXXXXXXXXXXXXSNFXXXXXXXXXXXXXCCRNRRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQ-SXXXXXXXXXXXXXXXXXXXAKAMGHHVTVISSS 697
            MGSL+ ER   GWAA+DPSG+LSPYTYTLR TG EDV+IK++YCGICHTDIHQIKNDLG SNYPM                 + F             CC+  RPC+ADVEQYCNKKIWSYNDVYTDGKPTQGGF+  MVVDQKFVVKIPDGMA EQAAPLLCAGVTV+SPL+HFGLK+ S                   AKAMGHHVTVISSS
Sbjct:    1 MGSLEAERKTTGWAARDPSGVLSPYTYTLRETGPEDVFIKIIYCGICHTDIHQIKNDLGASNYPMVPGHEVVGEVVEVGSDVTKFKVGDCVGDGTIVGCCKTCRPCKADVEQYCNKKIWSYNDVYTDGKPTQGGFSGHMVVDQKFVVKIPDGMAPEQAAPLLCAGVTVYSPLTHFGLKEISGLRGGILGLGGVGHMGVKLAKAMGHHVTVISSS 214          
BLAST of CK936530 vs. ExPASy Swiss-Prot
Match: CADH1_OCIBA (Cinnamyl alcohol dehydrogenase 1 OS=Ocimum basilicum GN=CAD1 PE=1 SV=1)

HSP 1 Score: 277.33 bits (708), Expect = 5.329e-74
Identity = 135/213 (63.38%), Postives = 150/213 (70.42%), Query Frame = 2
Query:   59 MGSLDTERAAMGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMXXXXXXXXXXXXXXXXXSNFXXXXXXXXXXXXXCCRNRRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSXXXXXXXXXXXXXXXXXXXAKAMGHHVTVISSS 697
            MGSL+ ER  +GWAA+DPSG+LSPY YTLRNTG +DVY++V+ CGICHTD+HQIKNDLGMSNYPM                 + F              C N RPC +D+EQYCNKKIWSYNDVY DGKPTQGGFA +MVVDQKFVVKIPDGMA EQAAPLLCAGVTV+SPL+HFGLKQS                   AKAMGHHVTVISSS
Sbjct:    1 MGSLEVERKTVGWAARDPSGVLSPYEYTLRNTGPQDVYVEVMCCGICHTDVHQIKNDLGMSNYPMVPGHEVVGEVVEVGSEVTKFRAGDVVGVGCIVGSCGNCRPCNSDIEQYCNKKIWSYNDVYPDGKPTQGGFAGAMVVDQKFVVKIPDGMAPEQAAPLLCAGVTVYSPLNHFGLKQSGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSS 213          
BLAST of CK936530 vs. ExPASy Swiss-Prot
Match: CADH1_TOBAC (Probable cinnamyl alcohol dehydrogenase 1 OS=Nicotiana tabacum GN=CAD14 PE=1 SV=1)

HSP 1 Score: 275.404 bits (703), Expect = 2.025e-73
Identity = 132/213 (61.97%), Postives = 150/213 (70.42%), Query Frame = 2
Query:   59 MGSLDTERAAMGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMXXXXXXXXXXXXXXXXXSNFXXXXXXXXXXXXXCCRNRRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSXXXXXXXXXXXXXXXXXXXAKAMGHHVTVISSS 697
            MG L+ E+  +GWAA+DPSG+LSPYTYTLRNTG EDV +KVLYCG+CHTD+HQ+KNDLGMSNYP+                 S F              CRN  PC+ D+EQYCNKKIW+ NDVYTDGKPTQGGFA+SMVVDQKFVVKIP+GMA EQAAPLLCAG+TV+SPL+HFG KQS                   AKAMGHHVTVISSS
Sbjct:    1 MGGLEVEKTTIGWAARDPSGVLSPYTYTLRNTGPEDVEVKVLYCGLCHTDLHQVKNDLGMSNYPLVPGHEVVGEVVEVGPDVSKFKVGDTVGVGLLVGSCRNCGPCKRDIEQYCNKKIWNCNDVYTDGKPTQGGFAKSMVVDQKFVVKIPEGMAPEQAAPLLCAGITVYSPLNHFGFKQSGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSS 213          
BLAST of CK936530 vs. ExPASy Swiss-Prot
Match: CADH4_ARATH (Cinnamyl alcohol dehydrogenase 4 OS=Arabidopsis thaliana GN=CAD4 PE=1 SV=1)

HSP 1 Score: 271.937 bits (694), Expect = 2.239e-72
Identity = 132/214 (61.68%), Postives = 155/214 (72.43%), Query Frame = 2
Query:   59 MGSLDT-ERAAMGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMXXXXXXXXXXXXXXXXXSNFXXXXXXXXXXXXXCCRNRRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSXXXXXXXXXXXXXXXXXXXAKAMGHHVTVISSS 697
            MGS++  E+ A+GWAA+DPSG+LSPY+YTLR+TGA+DVYIKV+ CGICHTDIHQIKNDLGMSNYPM                 S F             CC + +PC +++EQYCNK+IWSYNDVYTDGKPTQGGFA++M+V+QKFVVKIP+GMA+EQAAPLLCAGVTV+SPLSHFGL  S                   AKAMGHHVTVISSS
Sbjct:    1 MGSVEAGEKKALGWAARDPSGVLSPYSYTLRSTGADDVYIKVICCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVLEVGSDVSKFTVGDVVGVGVVVGCCGSCKPCSSELEQYCNKRIWSYNDVYTDGKPTQGGFADTMIVNQKFVVKIPEGMAVEQAAPLLCAGVTVYSPLSHFGLMASGLKGGILGLGGVGHMGVKIAKAMGHHVTVISSS 214          
BLAST of CK936530 vs. ExPASy Swiss-Prot
Match: CADH2_TOBAC (Probable cinnamyl alcohol dehydrogenase 2 OS=Nicotiana tabacum GN=CAD19 PE=1 SV=1)

HSP 1 Score: 271.552 bits (693), Expect = 2.924e-72
Identity = 130/213 (61.03%), Postives = 149/213 (69.95%), Query Frame = 2
Query:   59 MGSLDTERAAMGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMXXXXXXXXXXXXXXXXXSNFXXXXXXXXXXXXXCCRNRRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSXXXXXXXXXXXXXXXXXXXAKAMGHHVTVISSS 697
            MGSLD E++A+GWAA+DPSG+LSPYTYTLRNTG EDV +KVLYCG+CH+D+HQ+KNDLGMSNYP+                 S F              CRN  PC+ ++EQYCNKKIW+ NDVYTDGKPTQGGFA SMVVDQ FVVKIP+GMA EQAAPLLCAG+TV+SP +HFG  QS                   AKAMGHHVTVISSS
Sbjct:    1 MGSLDVEKSAIGWAARDPSGLLSPYTYTLRNTGPEDVQVKVLYCGLCHSDLHQVKNDLGMSNYPLVPGHEVVGKVVEVGADVSKFKVGDTVGVGLLVGSCRNCGPCKREIEQYCNKKIWNCNDVYTDGKPTQGGFANSMVVDQNFVVKIPEGMAPEQAAPLLCAGITVYSPFNHFGFNQSGFRGGILGLGGVGHMGVKIAKAMGHHVTVISSS 213          
BLAST of CK936530 vs. ExPASy Swiss-Prot
Match: CADH_POPDE (Probable cinnamyl alcohol dehydrogenase OS=Populus deltoides PE=2 SV=2)

HSP 1 Score: 266.544 bits (680), Expect = 9.407e-71
Identity = 130/213 (61.03%), Postives = 150/213 (70.42%), Query Frame = 2
Query:   59 MGSLDTERAAMGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMXXXXXXXXXXXXXXXXXSNFXXXXXXXXXXXXXCCRNRRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSXXXXXXXXXXXXXXXXXXXAKAMGHHVTVISSS 697
            MGSL+TER  +GWAA D +G L+PYTY+LR+TG EDV+IKV+ CG+CHTDIHQIKNDLGMS+YPM                 + F              C+N  PC++++EQYCNKKIWSYNDVYTDGKPTQGGFAESMVV QKFVV+IPDGM+ EQAAPLLCAG+TV+SPL HFGLKQS                   AKAMGHHVTVISSS
Sbjct:    1 MGSLETERKIVGWAATDSTGHLAPYTYSLRDTGPEDVFIKVISCGVCHTDIHQIKNDLGMSHYPMVPGHEVVGEVVEVGSDVTRFKVGDVVGVGVIVGSCKNCHPCKSEIEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVHQKFVVRIPDGMSPEQAAPLLCAGLTVYSPLKHFGLKQSGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSS 213          
BLAST of CK936530 vs. ExPASy Swiss-Prot
Match: CADH_EUCGL (Probable cinnamyl alcohol dehydrogenase OS=Eucalyptus globulus GN=CAD PE=2 SV=1)

HSP 1 Score: 262.692 bits (670), Expect = 1.358e-69
Identity = 128/213 (60.09%), Postives = 146/213 (68.54%), Query Frame = 2
Query:   59 MGSLDTERAAMGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMXXXXXXXXXXXXXXXXXSNFXXXXXXXXXXXXXCCRNRRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSXXXXXXXXXXXXXXXXXXXAKAMGHHVTVISSS 697
            MGSL+ ER   GWAA+DPSG+LSPYTY+LRNTG ED+YIKVL CGICH+DIHQIKNDLGMS+YPM                 + +             CCR+  PC +D EQYCNKKIW+YNDVYTDGKPTQGGFA  +VV ++FVVKIPDG+  EQAAPL+CAGVTV+SPL  FGLKQS                   AKAMGHHVTVISSS
Sbjct:    1 MGSLEKERTTTGWAARDPSGVLSPYTYSLRNTGPEDLYIKVLSCGICHSDIHQIKNDLGMSHYPMVPGHEVVGEVLEVGSEVTKYRVGDRVGTGIVVGCCRSCSPCNSDQEQYCNKKIWNYNDVYTDGKPTQGGFAGEIVVGERFVVKIPDGLESEQAAPLMCAGVTVYSPLVRFGLKQSGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSS 213          
BLAST of CK936530 vs. ExPASy Swiss-Prot
Match: CADH2_EUCGU (Probable cinnamyl alcohol dehydrogenase 2 OS=Eucalyptus gunnii GN=CAD2 PE=2 SV=1)

HSP 1 Score: 262.307 bits (669), Expect = 1.774e-69
Identity = 127/213 (59.62%), Postives = 146/213 (68.54%), Query Frame = 2
Query:   59 MGSLDTERAAMGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMXXXXXXXXXXXXXXXXXSNFXXXXXXXXXXXXXCCRNRRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSXXXXXXXXXXXXXXXXXXXAKAMGHHVTVISSS 697
            MGSL+ ER   GWAA+DPSG+LSPYTY+LRNTG ED+YIKVL CG+CH+DIHQIKNDLGMS+YPM                 + +             CCR+  PC +D EQYCNKKIW+YNDVYTDGKPTQGGFA  +VV ++FVVKIPDG+  EQAAPL+CAGVTV+SPL  FGLKQS                   AKAMGHHVTVISSS
Sbjct:    1 MGSLEKERTTTGWAARDPSGVLSPYTYSLRNTGPEDLYIKVLSCGVCHSDIHQIKNDLGMSHYPMVPGHEVVGEVLEVGSEVTKYRVGDRVGTGIVVGCCRSCSPCNSDQEQYCNKKIWNYNDVYTDGKPTQGGFAGEIVVGERFVVKIPDGLESEQAAPLMCAGVTVYSPLVRFGLKQSGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSS 213          
BLAST of CK936530 vs. ExPASy Swiss-Prot
Match: CADH1_EUCGU (Probable cinnamyl alcohol dehydrogenase 1 OS=Eucalyptus gunnii GN=CAD1 PE=3 SV=1)

HSP 1 Score: 260.766 bits (665), Expect = 5.162e-69
Identity = 127/213 (59.62%), Postives = 145/213 (68.08%), Query Frame = 2
Query:   59 MGSLDTERAAMGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMXXXXXXXXXXXXXXXXXSNFXXXXXXXXXXXXXCCRNRRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSXXXXXXXXXXXXXXXXXXXAKAMGHHVTVISSS 697
            MGSL+ ER   GWAA+DPSG+LSPYTY+LRNTG ED+YIKVL CGICH+DIHQIKNDLGMS+YPM                 + +             CCR+  PC +D EQYCNKKIW+YNDVYTDGKPTQGGFA  +VV ++FVVKIPDG+  EQAAPL+CAGVTV+ PL  FGLKQS                   AKAMGHHVTVISSS
Sbjct:    1 MGSLEKERTTTGWAARDPSGVLSPYTYSLRNTGPEDLYIKVLSCGICHSDIHQIKNDLGMSHYPMVPGHEVVGEVLEVGSEVTKYRVGDRVGTGIVVGCCRSCSPCNSDQEQYCNKKIWNYNDVYTDGKPTQGGFAGEIVVGERFVVKIPDGLESEQAAPLMCAGVTVYRPLVRFGLKQSGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSS 213          
BLAST of CK936530 vs. ExPASy Swiss-Prot
Match: CADH_MEDSA (Probable cinnamyl alcohol dehydrogenase OS=Medicago sativa GN=CAD2 PE=1 SV=1)

HSP 1 Score: 260.381 bits (664), Expect = 6.742e-69
Identity = 128/214 (59.81%), Postives = 149/214 (69.63%), Query Frame = 2
Query:   59 MGSLDT-ERAAMGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMXXXXXXXXXXXXXXXXXSNFXXXXXXXXXXXXXCCRNRRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSXXXXXXXXXXXXXXXXXXXAKAMGHHVTVISSS 697
            MGS++  ER  +G AAKDPSGIL+PYTYTLRNTG +DVYIK+ YCG+CH+D+HQIKNDLGMSNYPM                 + F             CC++ R C++++EQYCNKKIWSYNDVYTDGK TQGGFAES VV+QKFVVKIP+G+A EQ APLLCAGVTV+SPLSHFGLK                     AKA+GHHVTVISSS
Sbjct:    1 MGSIEAAERTTVGLAAKDPSGILTPYTYTLRNTGPDDVYIKIHYCGVCHSDLHQIKNDLGMSNYPMVPGHEVVGEVLEVGSNVTRFKVGEIVGVGLLVGCCKSCRACDSEIEQYCNKKIWSYNDVYTDGKITQGGFAESTVVEQKFVVKIPEGLAPEQVAPLLCAGVTVYSPLSHFGLKTPGLRGGILGLGGVGHMGVKVAKALGHHVTVISSS 214          
The following BLAST results are available for this feature:
BLAST of CK936530 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 52
Match NameE-valueIdentityDescription
CADH1_ARACO1.832e-7464.49Probable cinnamyl alcohol dehydrogenase 1 OS=Arali... [more]
CADH1_OCIBA5.329e-7463.38Cinnamyl alcohol dehydrogenase 1 OS=Ocimum basilic... [more]
CADH1_TOBAC2.025e-7361.97Probable cinnamyl alcohol dehydrogenase 1 OS=Nicot... [more]
CADH4_ARATH2.239e-7261.68Cinnamyl alcohol dehydrogenase 4 OS=Arabidopsis th... [more]
CADH2_TOBAC2.924e-7261.03Probable cinnamyl alcohol dehydrogenase 2 OS=Nicot... [more]
CADH_POPDE9.407e-7161.03Probable cinnamyl alcohol dehydrogenase OS=Populus... [more]
CADH_EUCGL1.358e-6960.09Probable cinnamyl alcohol dehydrogenase OS=Eucalyp... [more]
CADH2_EUCGU1.774e-6959.62Probable cinnamyl alcohol dehydrogenase 2 OS=Eucal... [more]
CADH1_EUCGU5.162e-6959.62Probable cinnamyl alcohol dehydrogenase 1 OS=Eucal... [more]
CADH_MEDSA6.742e-6959.81Probable cinnamyl alcohol dehydrogenase OS=Medicag... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004521_D03 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone F80DAB0001_IVF_D03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK936530 ID=CK936530; Name=CK936530; organism=Citrus sinensis; type=EST; length=697bp
GCGGGGACAAAACAAAACTTCACATAACTCANNNGCTAAAACGAAAAANN
NACAAAAAATGGGAAGCCTTGATACCGAGAGAGCAGCGATGGGGTGGGCT
GCAAAGGATCCATCTGGGATTCTGTCACCTTACACTTACACTCTCAGAAA
CACAGGAGCAGAAGATGTTTACATTAAGGTTCTTTACTGTGGAATCTGCC
ACACTGATATTCATCAAATAAAAAATGATCTGGGCATGTCTAACTATCCG
ATGGTTCCAGGACATGAGGTGGTGGGTGAAGTGAAGGAAGTGGGTTCAGA
AGTGAGCAACTTTAAAGTAGGAGATAAGGTTGGTGTTGGGGTTCTCGTTG
GTTGTTGCAGAAACCGCAGGCCGTGCGAGGCAGATGTTGAGCAGTACTGC
AATAAGAAAATCTGGTCCTATAACGATGTTTACACCGATGGCAAGCCTAC
ACAAGGCGGCTTTGCTGAGTCCATGGTCGTTGATCAAAAGTTTGTGGTGA
AAATACCAGATGGGATGGCACTGGAGCAGGCGGCACCGCTATTGTGTGCT
GGTGTGACAGTGTTCAGTCCCCTGAGCCACTTTGGATTGAAGCAGAGCGG
GCTGAGAGGAGGAATCTTGGGGCTCGGAGGAGTAGGTCACATGGGGGTTT
TGATAGCTAAGGCGATGGGACACCATGTTACTGTGATTAGCTCTTCT
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