CN186788
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN186788 vs. ExPASy Swiss-Prot
Match: TRXL4_ARATH (Thioredoxin-like 4 OS=Arabidopsis thaliana GN=At1g11530 PE=2 SV=2) HSP 1 Score: 140.584 bits (353), Expect = 5.937e-33 Identity = 68/113 (60.18%), Postives = 82/113 (72.57%), Query Frame = -2 Query: 243 SRVVKVDSVESWETFVSQANNQGCPVVVHFTAIWCMPSVAMNPLFEELASAYPXXXXXXXXXXXXXXVASKLEVKAMPTFLLMREGAVVDKLVGANPEEIRKRIDSFVQSIRV 581 +RVVK+DS ESW +VSQA NQ CP+V HFTA+WC+PSV MN FEELA Y VAS+LEVKAMPTFL +++G +DKLVGANP+EI+KR+D FVQS RV Sbjct: 2 ARVVKIDSAESWNFYVSQAKNQNCPIVAHFTALWCIPSVFMNSFFEELAFNYKDALFLIVDVDEVKEVASQLEVKAMPTFLFLKDGNAMDKLVGANPDEIKKRVDGFVQSSRV 114
BLAST of CN186788 vs. ExPASy Swiss-Prot
Match: TRXH_WHEAT (Thioredoxin H-type OS=Triticum aestivum PE=1 SV=3) HSP 1 Score: 76.2554 bits (186), Expect = 1.375e-13 Identity = 39/102 (38.24%), Postives = 56/102 (54.90%), Query Frame = -2 Query: 270 VVKVDSVESWETFVSQANNQGCPVVVHFTAIWCMPSVAMNPLFEELASAYPXXXXXXXXXXXXXXVASKLEVKAMPTFLLMREGAVVDKLVGANPEEIRKRI 575 V+ V S+E W + +AN VV+ FTA WC P M P+F +LA +P +A + V+AMPTFL M+EG V D++VGA EE+ ++ Sbjct: 20 VISVHSLEQWTMQIEEANAAKKLVVIDFTASWCGPCRIMAPIFADLAKKFPAAVFLKVDVDELKPIAEQFSVEAMPTFLFMKEGDVKDRVVGAIKEELTTKV 121
BLAST of CN186788 vs. ExPASy Swiss-Prot
Match: TRXH_POPJC (Thioredoxin H-type OS=Populus jackii PE=1 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 6.825e-13 Identity = 36/106 (33.96%), Postives = 58/106 (54.72%), Query Frame = -2 Query: 249 VDSVESWETFVSQANNQGCPVVVHFTAIWCMPSVAMNPLFEELASAYPXXXXXXXXXXXXXXVASKLEVKAMPTFLLMREGAVVDKLVGANPEEIRKRIDSFVQSI 566 + + E W+ +S+A+ G V+ +F+A WC P + P + EL+ YP ++ E+KA PTF +R+G VDKLVGAN E+ K+I + + S+ Sbjct: 29 ITTKERWDQKLSEASRDGKIVLANFSARWCGPCKQIAPYYIELSENYPSLMFLVIDVDELSDFSASWEIKATPTFFFLRDGQQVDKLVGANKPELHKKITAILDSL 134
BLAST of CN186788 vs. ExPASy Swiss-Prot
Match: TRXH1_ARATH (Thioredoxin H-type 1 OS=Arabidopsis thaliana GN=TRX1 PE=1 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.986e-12 Identity = 37/105 (35.24%), Postives = 57/105 (54.29%), Query Frame = -2 Query: 270 KSRVVKVDSVESWETFVSQANNQGCPVVVHFTAIWCMPSVAMNPLFEELASAYPXXXXXXXXXXXXXXVASKLEVKAMPTFLLMREGAVVDKLVGANPEEIRKRI 584 + +V+ +VE+W + +AN VVV FTA WC P + P F +LA P VAS ++AMPTF+ ++EG ++DK+VGA +E++ I Sbjct: 5 EGQVIACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKLPNVLFLKVDTDELKSVASDWAIQAMPTFMFLKEGKILDKVVGAKKDELQSTI 109
BLAST of CN186788 vs. ExPASy Swiss-Prot
Match: TRXH9_ARATH (Thioredoxin H-type 9 OS=Arabidopsis thaliana GN=TRX9 PE=1 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 5.778e-12 Identity = 33/106 (31.13%), Postives = 57/106 (53.77%), Query Frame = -2 Query: 249 VDSVESWETFVSQANNQGCPVVVHFTAIWCMPSVAMNPLFEELASAYPXXXXXXXXXXXXXXVASKLEVKAMPTFLLMREGAVVDKLVGANPEEIRKRIDSFVQSI 566 + + ESW+ +++A+ G VV +F+A WC P + P F EL+ + +S ++KA PTF ++ G + KLVGAN E++K++ S + S+ Sbjct: 28 ITTKESWDDKLAEADRDGKIVVANFSATWCGPCKIVAPFFIELSEKHSSLMFLLVDVDELSDFSSSWDIKATPTFFFLKNGQQIGKLVGANKPELQKKVTSIIDSV 133
BLAST of CN186788 vs. ExPASy Swiss-Prot
Match: TRXH5_ARATH (Thioredoxin H-type 5 OS=Arabidopsis thaliana GN=TRX5 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 9.855e-12 Identity = 34/105 (32.38%), Postives = 57/105 (54.29%), Query Frame = -2 Query: 270 KSRVVKVDSVESWETFVSQANNQGCPVVVHFTAIWCMPSVAMNPLFEELASAYPXXXXXXXXXXXXXXVASKLEVKAMPTFLLMREGAVVDKLVGANPEEIRKRI 584 + V+ ++E W V AN +V+ FTA WC P + P+F E+A + VA + +V+AMPTF+ M+EG ++D++VGA +EI +++ Sbjct: 4 EGEVIACHTLEVWNEKVKDANESKKLIVIDFTASWCPPCRFIAPVFAEMAKKFTNVVFFKIDVDELQAVAQEFKVEAMPTFVFMKEGNIIDRVVGAAKDEINEKL 108
BLAST of CN186788 vs. ExPASy Swiss-Prot
Match: TRXH_PICMA (Thioredoxin H-type OS=Picea mariana GN=SB09 PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 4.891e-11 Identity = 33/105 (31.43%), Postives = 56/105 (53.33%), Query Frame = -2 Query: 270 KSRVVKVDSVESWETFVSQANNQGCPVVVHFTAIWCMPSVAMNPLFEELASAYPXXXXXXXXXXXXXXVASKLEVKAMPTFLLMREGAVVDKLVGANPEEIRKRI 584 + V S E W + + +A + V V FTA WC P + P+F EL+ +P VA + +V+AMPTF+ +++G VDK+VGA +++ +++ Sbjct: 3 EGNVFACHSTEGWRSKLQEAIDTKRLVAVDFTATWCGPCRVIGPVFVELSKKFPEIFFLKVDVDELRDVAQEWDVEAMPTFIFIKDGKAVDKVVGAKKDDLERKV 107
BLAST of CN186788 vs. ExPASy Swiss-Prot
Match: TRXH_FAGES (Thioredoxin H-type OS=Fagopyrum esculentum PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 4.891e-11 Identity = 32/105 (30.48%), Postives = 58/105 (55.24%), Query Frame = -2 Query: 270 KSRVVKVDSVESWETFVSQANNQGCPVVVHFTAIWCMPSVAMNPLFEELASAYPXXXXXXXXXXXXXXVASKLEVKAMPTFLLMREGAVVDKLVGANPEEIRKRI 584 +++V+ +V+ W +A + G +V+ FTA WC P + P ELA +P VA + +V+AMP+F++++EG V+++VGA +E+ +I Sbjct: 4 EAQVIACHTVQEWNEKFQKAKDSGKLIVIDFTASWCGPCRVITPYVSELAKKFPHVAFFKVDVDDLKDVAEEYKVEAMPSFVILKEGQEVERIVGARKDELLHKI 108
BLAST of CN186788 vs. ExPASy Swiss-Prot
Match: TRXH2_TOBAC (Thioredoxin H-type 2 OS=Nicotiana tabacum PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 6.388e-11 Identity = 35/111 (31.53%), Postives = 59/111 (53.15%), Query Frame = -2 Query: 252 KSRVVKVDSVESWETFVSQANNQGCPVVVHFTAIWCMPSVAMNPLFEELASAYPXXXXXXXXXXXXXXVASKLEVKAMPTFLLMREGAVVDKLVGANPEEIRKRIDSFVQS 584 + +V+ V +V++W + + + +VV FTA WC P + + ELA P VA+ V+AMPTF+ ++EG +VDK+VGA +E+++ I + S Sbjct: 4 EGQVIGVHTVDAWNEHLQKGIDDKKLIVVDFTASWCGPCKFIASFYAELAKKMPTVTFLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGAKKDELQQTIAKHISS 114 The following BLAST results are available for this feature:
BLAST of CN186788 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 9
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN186788 ID=CN186788; Name=CN186788; organism=Citrus sinensis; type=EST; length=606bpback to top |