CK936512

Overview
NameCK936512
Unique NameCK936512
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length740
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK936512 vs. ExPASy Swiss-Prot
Match: UREG_SCHPO (Uncharacterized urease accessory protein ureG-like OS=Schizosaccharomyces pombe GN=SPCPB16A4.05c PE=2 SV=1)

HSP 1 Score: 244.202 bits (622), Expect = 1.635e-73
Identity = 122/196 (62.24%), Postives = 149/196 (76.02%), Query Frame = 1
Query:   55 GRVYHSHDGLAP---------------HSHEPIYSPG-YFSRRAPPILSRNFNERAFTVGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEELSNLFKADLLLCESGGDNLAANFSRELADYIIYIINVSGGDKIPRKGGPGITQADLL 594
            G  +HSHD  +                HSH+ + +PG Y  R  P    R+F+ RAFT+G+GGPVG+GKTAL+L LC+ L +KYS+  VTNDIFT+ED EFL+RN ALPEERIRA+ETGGCPHAAIRED+S NL  LEEL + F  +LLL ESGGDNLAAN+SR+LAD+IIY+I+VSGGDKIPRKGGPGIT++DLL
Sbjct:   31 GHDHHSHDSSSNSSSEAARLQFIQEHGHSHDAMETPGSYLKRELPQFNHRDFSRRAFTIGVGGPVGSGKTALLLQLCRLLGEKYSIGVVTNDIFTREDQEFLIRNKALPEERIRAIETGGCPHAAIREDVSGNLVALEELQSEFNTELLLVESGGDNLAANYSRDLADFIIYVIDVSGGDKIPRKGGPGITESDLL 226          

HSP 2 Score: 51.9878 bits (123), Expect = 1.635e-73
Identity = 23/42 (54.76%), Postives = 34/42 (80.95%), Query Frame = 3
Query:  597 IGADLAVMERDALRMRDGGPFIFAQVKHGLGVEEIVNHILQA 722
            +GADL+VM+RDA ++R+ GP +FAQVK+ +G++EI   IL A
Sbjct:  237 VGADLSVMDRDAKKIRENGPIVFAQVKNQVGMDEITELILGA 278          
BLAST of CK936512 vs. ExPASy Swiss-Prot
Match: UREG_ANADF (Urease accessory protein ureG OS=Anaeromyxobacter sp. (strain Fw109-5) GN=ureG PE=3 SV=1)

HSP 1 Score: 236.113 bits (601), Expect = 2.786e-73
Identity = 116/174 (66.67%), Postives = 135/174 (77.59%), Query Frame = 1
Query:   73 HDGLAPHSHEPIYSPGYFSRRAPPILSRNFNERAFTVGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEELSNLFKADLLLCESGGDNLAANFSRELADYIIYIINVSGGDKIPRKGGPGITQADLL 594
            HD      H+    PG F  R  P    +   RAFTVG+GGPVG+GKTAL+LALC+ LRD  SL  VTNDIFT+ED EFL+RN ALP ERIRAVETGGCPHAAIRED++ NL  LEEL+   + ++L CESGGDNLAA+FSRELADY IY+I+V+GGDK+PRKGGPGITQADLL
Sbjct:    2 HDHSLHSGHDHGLGPGSFHDRGAPHARGDLRRRAFTVGVGGPVGSGKTALVLALCRALRDSRSLGVVTNDIFTREDAEFLVRNDALPAERIRAVETGGCPHAAIREDVTANLLALEELTEAHRPEILFCESGGDNLAAHFSRELADYTIYVIDVAGGDKVPRKGGPGITQADLL 175          

HSP 2 Score: 59.3066 bits (142), Expect = 2.786e-73
Identity = 28/50 (56.00%), Postives = 34/50 (68.00%), Query Frame = 3
Query:  591 SAIGADLAVMERDALRMRDGGPFIFAQVKHGLGVEEIVNHILQAWEAXXG 740
            +A+GADL VM RDA RMR  GP +FAQV  G+GV EI  H+L A+    G
Sbjct:  184 TAVGADLDVMARDAARMRGDGPVVFAQVTRGVGVPEIAGHVLHAYRHAVG 233          
BLAST of CK936512 vs. ExPASy Swiss-Prot
Match: UREG_SORC5 (Urease accessory protein ureG OS=Sorangium cellulosum (strain So ce56) GN=ureG PE=3 SV=1)

HSP 1 Score: 233.417 bits (594), Expect = 5.161e-72
Identity = 122/197 (61.93%), Postives = 144/197 (73.10%), Query Frame = 1
Query:    4 HEKNHGDSTATSWVGSDGRVYHSHDGLAPHSHEPIYSPGYFSRRAPPILSRNFNERAFTVGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEELSNLFKADLLLCESGGDNLAANFSRELADYIIYIINVSGGDKIPRKGGPGITQADLL 594
            HE  HG     +   +     H+H+    H+HE    PG FS R  P   R+F+ RAFTVGIGGPVG+GKTAL+LALC+ LRD+  L  VTNDIFT+ED EFL RN ALP ERIRAVETGGCPHAAIREDIS NL  L++L +     LL+ ESGGDNLAA +SREL DY IY+I+V+GGDK+PRKGGPGITQ+DLL
Sbjct:   46 HEHAHGHEHGHAHAHAHA---HAHEHAHGHTHEHWAHPGLFSERDAP-KDRDFSARAFTVGIGGPVGSGKTALVLALCRALRDRMPLGVVTNDIFTQEDAEFLHRNKALPPERIRAVETGGCPHAAIREDISHNLVALDDLMDHVAPALLIVESGGDNLAAQYSRELVDYTIYVIDVAGGDKVPRKGGPGITQSDLL 238          

HSP 2 Score: 57.7658 bits (138), Expect = 5.161e-72
Identity = 27/42 (64.29%), Postives = 31/42 (73.81%), Query Frame = 3
Query:  597 IGADLAVMERDALRMRDGGPFIFAQVKHGLGVEEIVNHILQA 722
            +GADL VMERDA RMR  GPF+FAQ     GV EI++HIL A
Sbjct:  249 VGADLGVMERDARRMRGDGPFLFAQCNRSQGVPEIIDHILSA 290          
BLAST of CK936512 vs. ExPASy Swiss-Prot
Match: UREG_CYTH3 (Urease accessory protein ureG OS=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) GN=ureG PE=3 SV=1)

HSP 1 Score: 219.935 bits (559), Expect = 1.246e-67
Identity = 111/162 (68.52%), Postives = 129/162 (79.63%), Query Frame = 1
Query:  112 SPGYFSRRAPPILSRNFNERAFTVGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEELSNLF-KADLLLCESGGDNLAANFSRELADYIIYIINVSGGDKIPRKGGPGITQADLL 594
            SPG+F  R      RNF +RAFTVGIGGPVGTGKTA ++ +CK LRDK ++A VTNDIFT ED EFL+RN AL ++RI  VETGGCPHAAIRED+S N+  LEEL   F   +LL  ESGGDNLAA+FS+EL DY +Y+I+VSGGDKIPRKGGPGITQADLL
Sbjct:   15 SPGHFHHRELIHEKRNFKKRAFTVGIGGPVGTGKTAWLMQICKALRDKMNIAVVTNDIFTSEDAEFLIRNEALSKDRIIGVETGGCPHAAIREDVSQNMYALEELMKRFPDVELLFVESGGDNLAAHFSKELVDYSVYVIDVSGGDKIPRKGGPGITQADLL 176          

HSP 2 Score: 56.6102 bits (135), Expect = 1.246e-67
Identity = 25/44 (56.82%), Postives = 34/44 (77.27%), Query Frame = 3
Query:  597 IGADLAVMERDALRMRDGGPFIFAQVKHGLGVEEIVNHILQAWE 728
            + ADL+VMERD+ +MR  GPF+FA+ K   G++EI+NHIL A E
Sbjct:  187 VNADLSVMERDSKKMRGDGPFLFARAKDCFGIDEIINHILTARE 230          
BLAST of CK936512 vs. ExPASy Swiss-Prot
Match: UREG_METNO (Urease accessory protein ureG OS=Methylobacterium nodulans (strain ORS2060 / LMG 21967) GN=ureG PE=3 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 2.456e-56
Identity = 96/139 (69.06%), Postives = 110/139 (79.14%), Query Frame = 1
Query:  181 VGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEELSNLFKA-DLLLCESGGDNLAANFSRELADYIIYIINVSGGDKIPRKGGPGITQADLL 594
            VGIGGPVG+GKTALM  LCK LR +Y L A+TNDI+TKED   L   GALPEERI  VETGGCPH AIRED SINL  + E+   F A DL+L ESGGDNLAA FS ELAD  +Y+I+V+GG+KIPRKGGPGIT++DLL
Sbjct:   11 VGIGGPVGSGKTALMEGLCKALRARYDLCAITNDIYTKEDARLLTVAGALPEERIMGVETGGCPHTAIREDASINLAAVAEMRRRFPALDLILIESGGDNLAATFSPELADLTLYVIDVAGGEKIPRKGGPGITRSDLL 149          

HSP 2 Score: 48.1358 bits (113), Expect = 2.456e-56
Identity = 20/42 (47.62%), Postives = 29/42 (69.05%), Query Frame = 3
Query:  597 IGADLAVMERDALRMRDGGPFIFAQVKHGLGVEEIVNHILQA 722
            +GADLAVME D  RMR   P++F  ++ G GVEE+   +++A
Sbjct:  160 VGADLAVMEADTRRMRGSRPYVFTSLRQGEGVEEVARFVVEA 201          
BLAST of CK936512 vs. ExPASy Swiss-Prot
Match: UREG_METS4 (Urease accessory protein ureG OS=Methylobacterium sp. (strain 4-46) GN=ureG PE=3 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 1.206e-55
Identity = 94/139 (67.63%), Postives = 110/139 (79.14%), Query Frame = 1
Query:  181 VGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEELSNLFKA-DLLLCESGGDNLAANFSRELADYIIYIINVSGGDKIPRKGGPGITQADLL 594
            VGIGGPVG+GKTALM  LCK LR ++ L A+TNDI+TKED   L   GALPEERI  VETGGCPH AIRED SINL  + E+   F + DL+L ESGGDNLAA FS ELAD  +Y+I+V+GG+KIPRKGGPGIT++DLL
Sbjct:   11 VGIGGPVGSGKTALMEGLCKALRGRFDLCAITNDIYTKEDARLLTVAGALPEERIMGVETGGCPHTAIREDASINLAAVAEMRRRFPSLDLILIESGGDNLAATFSPELADLTLYVIDVAGGEKIPRKGGPGITRSDLL 149          

HSP 2 Score: 48.1358 bits (113), Expect = 1.206e-55
Identity = 20/42 (47.62%), Postives = 29/42 (69.05%), Query Frame = 3
Query:  597 IGADLAVMERDALRMRDGGPFIFAQVKHGLGVEEIVNHILQA 722
            +GADLAVME D  RMR G P++F  ++ G GVE +   +++A
Sbjct:  160 VGADLAVMEADTQRMRGGRPYVFTSLRRGDGVEAVARFVIEA 201          
BLAST of CK936512 vs. ExPASy Swiss-Prot
Match: UREG_PSEU5 (Urease accessory protein ureG OS=Pseudomonas stutzeri (strain A1501) GN=ureG PE=3 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 3.483e-55
Identity = 95/145 (65.52%), Postives = 116/145 (80.00%), Query Frame = 1
Query:  163 NERAFTVGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEELSNLFKA-DLLLCESGGDNLAANFSRELADYIIYIINVSGGDKIPRKGGPGITQADLL 594
            N +   VGIGGPVG+GKTAL LALC+ LRD+Y+LA VTNDI+T+ED +FL+RN AL  ERI  VETGGCPH AIRED SINL  +E+L+  F   DL++ ESGGDNL+A FS EL+D  IY+I+VS GDK+PRKGGPGI ++DLL
Sbjct:    2 NTQPLRVGIGGPVGSGKTALTLALCQALRDRYNLAVVTNDIYTQEDAQFLVRNEALAPERIIGVETGGCPHTAIREDASINLEAVEQLNRRFPGLDLIIVESGGDNLSATFSPELSDLTIYVIDVSAGDKLPRKGGPGICKSDLL 146          

HSP 2 Score: 43.8986 bits (102), Expect = 3.483e-55
Identity = 20/39 (51.28%), Postives = 28/39 (71.79%), Query Frame = 3
Query:  597 IGADLAVMERDALRMRDGGPFIFAQVKHGLGVEEIVNHI 713
            +GA L VM+RDA +MR   PF+F+  K G G+EEI++ I
Sbjct:  157 VGASLEVMDRDARKMRGERPFVFSNQKVGQGLEEIISFI 195          
BLAST of CK936512 vs. ExPASy Swiss-Prot
Match: UREG1_METRJ (Urease accessory protein ureG 1 OS=Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) GN=ureG1 PE=3 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 5.920e-55
Identity = 96/139 (69.06%), Postives = 111/139 (79.86%), Query Frame = 1
Query:  181 VGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEELSNLF-KADLLLCESGGDNLAANFSRELADYIIYIINVSGGDKIPRKGGPGITQADLL 594
            VGIGGPVG+GKTALM  LCK  RD+Y + A+TNDI+TKED   L   GALPEERI  VETGGCPH AIRED SINL  + E+S  F K DL+L ESGGDNLAA FS ELAD  +Y+I+V+GG+KIPRKGGPGIT++DLL
Sbjct:   10 VGIGGPVGSGKTALMEQLCKRFRDRYEICAITNDIYTKEDARILTVAGALPEERILGVETGGCPHTAIREDASINLAAVAEMSRRFPKLDLVLIESGGDNLAATFSPELADITLYVIDVAGGEKIPRKGGPGITRSDLL 148          

HSP 2 Score: 41.9726 bits (97), Expect = 5.920e-55
Identity = 17/42 (40.48%), Postives = 27/42 (64.29%), Query Frame = 3
Query:  597 IGADLAVMERDALRMRDGGPFIFAQVKHGLGVEEIVNHILQA 722
            +GADL+VME D  RMR   P++FA ++ G G + +   + +A
Sbjct:  159 VGADLSVMESDTQRMRGTRPYVFASLREGTGADAVARFVEEA 200          
BLAST of CK936512 vs. ExPASy Swiss-Prot
Match: UREG_PSEFS (Urease accessory protein ureG OS=Pseudomonas fluorescens (strain SBW25) GN=ureG PE=3 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 7.717e-55
Identity = 95/145 (65.52%), Postives = 115/145 (79.31%), Query Frame = 1
Query:  163 NERAFTVGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEELSNLFKA-DLLLCESGGDNLAANFSRELADYIIYIINVSGGDKIPRKGGPGITQADLL 594
            N +   VGIGGPVG+GKTAL LALC  LRD+Y+LA VTNDI+T+ED +FL+RN AL  ERI  VETGGCPH AIRED SINL  +++L+  F   DL+L ESGGDNL+A FS EL+D  IY+I+VS GDK+PRKGGPGI ++DLL
Sbjct:    2 NTQPLRVGIGGPVGSGKTALTLALCLALRDRYNLAVVTNDIYTREDADFLVRNQALAPERIIGVETGGCPHTAIREDASINLEAVDQLNRRFPGLDLILVESGGDNLSATFSPELSDLTIYVIDVSAGDKLPRKGGPGICKSDLL 146          

HSP 2 Score: 43.8986 bits (102), Expect = 7.717e-55
Identity = 20/39 (51.28%), Postives = 27/39 (69.23%), Query Frame = 3
Query:  597 IGADLAVMERDALRMRDGGPFIFAQVKHGLGVEEIVNHI 713
            +GA L +M  D  RMR+G PF+F+  K G+G+EEIV  I
Sbjct:  157 VGASLELMNSDTQRMRNGKPFVFSNQKTGVGLEEIVAFI 195          
BLAST of CK936512 vs. ExPASy Swiss-Prot
Match: UREG1_METPB (Urease accessory protein ureG 1 OS=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) GN=ureG1 PE=3 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 1.710e-54
Identity = 94/139 (67.63%), Postives = 110/139 (79.14%), Query Frame = 1
Query:  181 VGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEELSNLF-KADLLLCESGGDNLAANFSRELADYIIYIINVSGGDKIPRKGGPGITQADLL 594
            VGIGGPVG+GKTALM  LC+  RD+Y + A+TNDI+TKED   L   GALPEERI  VETGGCPH AIRED SINL  + E+   F K DL+L ESGGDNLAA FS ELAD  +Y+I+V+GG+KIPRKGGPGIT++DLL
Sbjct:   10 VGIGGPVGSGKTALMEQLCRRFRDRYEICAITNDIYTKEDARILTVAGALPEERILGVETGGCPHTAIREDASINLAAVAEMRRRFPKLDLVLIESGGDNLAATFSPELADITLYVIDVAGGEKIPRKGGPGITRSDLL 148          

HSP 2 Score: 43.5134 bits (101), Expect = 1.710e-54
Identity = 18/42 (42.86%), Postives = 28/42 (66.67%), Query Frame = 3
Query:  597 IGADLAVMERDALRMRDGGPFIFAQVKHGLGVEEIVNHILQA 722
            +GADL+VME D  RMR   P++FA ++ G G + +   I++A
Sbjct:  159 VGADLSVMESDTQRMRGTRPYVFASLREGHGADRVATFIVEA 200          
The following BLAST results are available for this feature:
BLAST of CK936512 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 253
Match NameE-valueIdentityDescription
UREG_SCHPO1.635e-7362.24Uncharacterized urease accessory protein ureG-like... [more]
UREG_ANADF2.786e-7366.67Urease accessory protein ureG OS=Anaeromyxobacter ... [more]
UREG_SORC55.161e-7261.93Urease accessory protein ureG OS=Sorangium cellulo... [more]
UREG_CYTH31.246e-6768.52Urease accessory protein ureG OS=Cytophaga hutchin... [more]
UREG_METNO2.456e-5669.06Urease accessory protein ureG OS=Methylobacterium ... [more]
UREG_METS41.206e-5567.63Urease accessory protein ureG OS=Methylobacterium ... [more]
UREG_PSEU53.483e-5565.52Urease accessory protein ureG OS=Pseudomonas stutz... [more]
UREG1_METRJ5.920e-5569.06Urease accessory protein ureG 1 OS=Methylobacteriu... [more]
UREG_PSEFS7.717e-5565.52Urease accessory protein ureG OS=Pseudomonas fluor... [more]
UREG1_METPB1.710e-5467.63Urease accessory protein ureG 1 OS=Methylobacteriu... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004521_E09 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone F80DAB0001_IVF_E09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK936512 ID=CK936512; Name=CK936512; organism=Citrus sinensis; type=EST; length=740bp
ACCCATGAAAAAAATCATGGTGATTCAACAGCAACATCATGGGTGGGGTC
AGATGGGAGGGTGTATCATAGCCATGATGGACTGGCGCCACACTCGCACG
AACCCATTTACTCTCCAGGCTATTTCAGCAGAAGAGCTCCGCCTATTCTC
AGCAGAAATTTCAATGAGAGAGCTTTTACCGTTGGCATTGGTGGCCCTGT
TGGTACTGGGAAAACAGCTTTAATGCTGGCTTTGTGTAAATTCTTGCGGG
ACAAGTACAGTCTTGCAGCTGTCACAAATGATATTTTCACAAAAGAAGAT
GGTGAATTCCTGATGCGGAATGGTGCTCTGCCTGAGGAGAGAATACGTGC
TGTGGAAACAGGTGGATGTCCTCATGCTGCAATTCGTGAAGACATCAGCA
TCAATCTGGGCCCTCTCGAGGAACTTTCTAACTTGTTCAAAGCAGACCTA
CTTCTTTGCGAATCTGGGGGAGATAATTTAGCTGCCAACTTCAGCAGGGA
ACTTGCAGACTATATCATTTATATAATAAACGTTTCTGGTGGTGATAAAA
TTCCTCGGAAAGGTGGCCCAGGCATCACCCAAGCTGACCTTCTGCAATAG
GAGCTGACTTAGCAGTAATGGAGCGTGATGCACTCCGGATGCGTGATGGA
GGGCCTTTTATCTTCGCTCAGGTCAAGCATGGGCTTGGTGTGGAGGAAAT
AGTGAATCACATTTTACAGGCTTGGGAAGCANNNNCAGGG
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