CN186781
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN186781 vs. ExPASy Swiss-Prot
Match: RL4_PRUAR (60S ribosomal protein L4 OS=Prunus armeniaca GN=RPL4 PE=2 SV=1) HSP 1 Score: 268.47 bits (685), Expect = 2.735e-71 Identity = 141/221 (63.80%), Postives = 151/221 (68.33%), Query Frame = 3 Query: 3 QKAKDSQGIRPGKGKMRNRRYISRKGPLVVYSAEGANLVKAFRNIPGXXXXXXXXXXXXXXAPGGHLGRFIVWTKSAFEKLDEIYGKFDKGSEKKKGYVLPRAKMVNADLARIINSDEVQSVVRPIKTEVKRAXXXXXXXXXXXXXXXXXXYAKTARRMSLLAEAQRVXXXXXXXXXXXXPITXXXXXXXXXXXXXWYQTMISDSDYTEFENFSKWLGVSQ 665 +KAKDS IRPGKGKMRNRRYI+RKGPL+VY EGA LVKAFRNIPG APGGHLGRF+VWTKSAFEKLD IYG FDK SEKK GYVLPR+KMVNADLARIINSDEVQSVV PI+ KRA YAKTARRMSLLAEA+RV PI+ WYQTMISDSDYTEF+NF+KWLGVSQ Sbjct: 188 EKAKDSHSIRPGKGKMRNRRYINRKGPLIVYGTEGAKLVKAFRNIPGIDIINVERLNLLKLAPGGHLGRFVVWTKSAFEKLDSIYGSFDKVSEKKNGYVLPRSKMVNADLARIINSDEVQSVVSPIQEGSKRAPLKKNPLRILNTMLKLNPYAKTARRMSLLAEAERVKAKKEKLDKKRKPISKEEASTIKAAGKAWYQTMISDSDYTEFDNFTKWLGVSQ 408
BLAST of CN186781 vs. ExPASy Swiss-Prot
Match: RL4A_ARATH (60S ribosomal protein L4-1 OS=Arabidopsis thaliana GN=RPL4A PE=2 SV=1) HSP 1 Score: 265.388 bits (677), Expect = 2.315e-70 Identity = 136/221 (61.54%), Postives = 152/221 (68.78%), Query Frame = 3 Query: 3 QKAKDSQGIRPGKGKMRNRRYISRKGPLVVYSAEGANLVKAFRNIPGXXXXXXXXXXXXXXAPGGHLGRFIVWTKSAFEKLDEIYGKFDKGSEKKKGYVLPRAKMVNADLARIINSDEVQSVVRPIKTEVKRAXXXXXXXXXXXXXXXXXXYAKTARRMSLLAEAQRVXXXXXXXXXXXXPITXXXXXXXXXXXXXWYQTMISDSDYTEFENFSKWLGVSQ 665 +KAK+S GIRPGKGKMRNRRYISRKGPLVVY EG+ +VKAFRN+PG APGGHLGRF++WTKSAFEKL+ IYG F+K SEKKKGYVLPRAKMVNADLARIINSDE+QSVV PIK + KRA YAKTA+RMSLLAEAQRV +T WY+TMISDSDYTEF+NF+KWLG SQ Sbjct: 186 EKAKNSIGIRPGKGKMRNRRYISRKGPLVVYGTEGSKIVKAFRNLPGVELCHVERLNLLKLAPGGHLGRFVIWTKSAFEKLESIYGSFEKPSEKKKGYVLPRAKMVNADLARIINSDEIQSVVNPIKKDAKRAVLKKNPLKNLNVMLKLNPYAKTAKRMSLLAEAQRVKAKKEKLAKKRKTVTKEEALAIKAAGKSWYKTMISDSDYTEFDNFTKWLGASQ 406
BLAST of CN186781 vs. ExPASy Swiss-Prot
Match: RL4B_ARATH (60S ribosomal protein L4-2 OS=Arabidopsis thaliana GN=RPL4D PE=1 SV=2) HSP 1 Score: 262.307 bits (669), Expect = 1.960e-69 Identity = 137/221 (61.99%), Postives = 150/221 (67.87%), Query Frame = 3 Query: 3 QKAKDSQGIRPGKGKMRNRRYISRKGPLVVYSAEGANLVKAFRNIPGXXXXXXXXXXXXXXAPGGHLGRFIVWTKSAFEKLDEIYGKFDKGSEKKKGYVLPRAKMVNADLARIINSDEVQSVVRPIKTEVKRAXXXXXXXXXXXXXXXXXXYAKTARRMSLLAEAQRVXXXXXXXXXXXXPITXXXXXXXXXXXXXWYQTMISDSDYTEFENFSKWLGVSQ 665 +KAK+S GIRPGKGKMRNRRYISRKGPLVV+ EGA +VKAFRN+PG APGGHLGRF++WTKSAFEKL+ IYG F+K SEKKKGYVLPRAKMVNADLARIINSDEVQSVV PIK KRA YAKTA+RMSLLAEA RV +T WYQTMISDSDYTEF+NF+KWLG SQ Sbjct: 187 EKAKNSIGIRPGKGKMRNRRYISRKGPLVVFGTEGAKIVKAFRNLPGVELCHVERLNLLKLAPGGHLGRFVIWTKSAFEKLESIYGSFEKPSEKKKGYVLPRAKMVNADLARIINSDEVQSVVNPIKDGSKRAVLKKNPLKNLNVMFKLNPYAKTAKRMSLLAEASRVKAKKEKLEKKRKVVTKEEAQAIKAAGKAWYQTMISDSDYTEFDNFTKWLGASQ 407
BLAST of CN186781 vs. ExPASy Swiss-Prot
Match: RL4A_XENLA (60S ribosomal protein L4-A OS=Xenopus laevis GN=rpl4-A PE=2 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 8.600e-33 Identity = 75/168 (44.64%), Postives = 97/168 (57.74%), Query Frame = 3 Query: 3 QKAKDSQGIRPGKGKMRNRRYISRKGPLVVYSAEGANLVKAFRNIPGXXXXXXXXXXXXXXAPGGHLGRFIVWTKSAFEKLDEIYGKFDKGSEKKKGYVLPRAKMVNADLARIINSDEVQSVVRPIKTEVKRAXXXXXXXXXXXXXXXXXXYAKTARRMSLLAEAQRV 506 +K SQ +R GKGKMRNRR I R+GP V+Y+ E LVKAFRNIPG APGGH+GRF +WT+SAF KLD++YG + K ++ K Y LP KM N DL RI+ S E+Q +R +VKR YAKTARR ++L + + + Sbjct: 185 KKVYASQRMRAGKGKMRNRRRIQRRGPCVIYN-ENNGLVKAFRNIPGITLLNVSKLNLLRLAPGGHVGRFCIWTESAFRKLDDLYGTWRKSAKLKADYNLPMHKMTNTDLTRILKSQEIQRALRAPNKKVKRRELKKNPLKNLRIMMRLNPYAKTARRHAILQQLENI 351
BLAST of CN186781 vs. ExPASy Swiss-Prot
Match: RL4_DICDI (60S ribosomal protein L4 OS=Dictyostelium discoideum GN=rpl4 PE=1 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 1.467e-32 Identity = 72/131 (54.96%), Postives = 86/131 (65.65%), Query Frame = 3 Query: 6 KAKDSQGIRPGKGKMRNRRYISRKGPLVVYSAEGANLVKAFRNIPGXXXXXXXXXXXXXXAPGGHLGRFIVWTKSAFEKLDEIYGKFDKGSEKKKGYVLPRAKMVNADLARIINSDEVQSVVRPIKTEVKR 398 K DS+ IR G GK RNRRY RKGPLVV S + + +A RNIPG APGGHLGRFI+WTKSAFE+LD +G F K S +KKGY LPR + NAD+ R++NSDE+Q+ VR K VKR Sbjct: 181 KVIDSKHIRAGAGKARNRRYKVRKGPLVVVSGK-TTVSQALRNIPGVEVANVSRLNLLKLAPGGHLGRFIIWTKSAFEQLDSTFGTFAKSSAQKKGYTLPRPMIANADIVRLVNSDEIQAAVRASKVVVKR 310
BLAST of CN186781 vs. ExPASy Swiss-Prot
Match: RL4B_XENLA (60S ribosomal protein L4-B (Fragment) OS=Xenopus laevis GN=rpl4-B PE=2 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 1.916e-32 Identity = 73/168 (43.45%), Postives = 97/168 (57.74%), Query Frame = 3 Query: 3 QKAKDSQGIRPGKGKMRNRRYISRKGPLVVYSAEGANLVKAFRNIPGXXXXXXXXXXXXXXAPGGHLGRFIVWTKSAFEKLDEIYGKFDKGSEKKKGYVLPRAKMVNADLARIINSDEVQSVVRPIKTEVKRAXXXXXXXXXXXXXXXXXXYAKTARRMSLLAEAQRV 506 +K SQ +R GKGKMRNRR I R+GP V+Y+ E ++KAFRNIPG APGGH+GRF +WT+SAF KLD++YG + K ++ K Y LP KM N DL RI+ S E+Q +R +VKR YAKTARR ++L + + + Sbjct: 180 KKVYASQRMRAGKGKMRNRRRIQRRGPCVIYN-ENNGIIKAFRNIPGITLLNVSKLNLLRLAPGGHVGRFCIWTESAFRKLDDLYGTWRKSAKLKADYNLPMHKMTNTDLTRILKSQEIQRALRAPNKKVKRRELKKNPLKNLRIMMRLNPYAKTARRHAILQQLENI 346
BLAST of CN186781 vs. ExPASy Swiss-Prot
Match: RL4_PONAB (60S ribosomal protein L4 OS=Pongo abelii GN=RPL4 PE=2 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 5.574e-32 Identity = 71/166 (42.77%), Postives = 97/166 (58.43%), Query Frame = 3 Query: 3 QKAKDSQGIRPGKGKMRNRRYISRKGPLVVYSAEGANLVKAFRNIPGXXXXXXXXXXXXXXAPGGHLGRFIVWTKSAFEKLDEIYGKFDKGSEKKKGYVLPRAKMVNADLARIINSDEVQSVVRPIKTEVKRAXXXXXXXXXXXXXXXXXXYAKTARRMSLLAEAQ 500 +K SQ +R GKGKMRNRR I R+GP ++Y+ E ++KAFRNIPG APGGH+GRF +WT+SAF KLDE+YG + K + K Y LP KM+N DL+RI+ S E+Q +R + ++ R YAKT RR ++L +A+ Sbjct: 181 KKVYASQRMRAGKGKMRNRRRIQRRGPCIIYN-EDNGIIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTILRQAR 345
BLAST of CN186781 vs. ExPASy Swiss-Prot
Match: RL4_HUMAN (60S ribosomal protein L4 OS=Homo sapiens GN=RPL4 PE=1 SV=5) HSP 1 Score: 137.887 bits (346), Expect = 5.574e-32 Identity = 71/166 (42.77%), Postives = 97/166 (58.43%), Query Frame = 3 Query: 3 QKAKDSQGIRPGKGKMRNRRYISRKGPLVVYSAEGANLVKAFRNIPGXXXXXXXXXXXXXXAPGGHLGRFIVWTKSAFEKLDEIYGKFDKGSEKKKGYVLPRAKMVNADLARIINSDEVQSVVRPIKTEVKRAXXXXXXXXXXXXXXXXXXYAKTARRMSLLAEAQ 500 +K SQ +R GKGKMRNRR I R+GP ++Y+ E ++KAFRNIPG APGGH+GRF +WT+SAF KLDE+YG + K + K Y LP KM+N DL+RI+ S E+Q +R + ++ R YAKT RR ++L +A+ Sbjct: 181 KKVYASQRMRAGKGKMRNRRRIQRRGPCIIYN-EDNGIIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTILRQAR 345
BLAST of CN186781 vs. ExPASy Swiss-Prot
Match: RL4_RAT (60S ribosomal protein L4 OS=Rattus norvegicus GN=Rpl4 PE=1 SV=3) HSP 1 Score: 137.117 bits (344), Expect = 9.508e-32 Identity = 71/166 (42.77%), Postives = 97/166 (58.43%), Query Frame = 3 Query: 3 QKAKDSQGIRPGKGKMRNRRYISRKGPLVVYSAEGANLVKAFRNIPGXXXXXXXXXXXXXXAPGGHLGRFIVWTKSAFEKLDEIYGKFDKGSEKKKGYVLPRAKMVNADLARIINSDEVQSVVRPIKTEVKRAXXXXXXXXXXXXXXXXXXYAKTARRMSLLAEAQ 500 +K SQ +R GKGKMRNRR I R+GP ++Y+ E ++KAFRNIPG APGGH+GRF +WT+SAF KLDE+YG + K + K Y LP KM+N DL+RI+ S E+Q +R + ++ R YAKT RR ++L +A+ Sbjct: 181 KKVYASQRMRAGKGKMRNRRRIQRRGPCIIYN-EDNGIIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNLPMHKMMNTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTILRQAR 345
BLAST of CN186781 vs. ExPASy Swiss-Prot
Match: RL4_MOUSE (60S ribosomal protein L4 OS=Mus musculus GN=Rpl4 PE=1 SV=3) HSP 1 Score: 137.117 bits (344), Expect = 9.508e-32 Identity = 71/166 (42.77%), Postives = 97/166 (58.43%), Query Frame = 3 Query: 3 QKAKDSQGIRPGKGKMRNRRYISRKGPLVVYSAEGANLVKAFRNIPGXXXXXXXXXXXXXXAPGGHLGRFIVWTKSAFEKLDEIYGKFDKGSEKKKGYVLPRAKMVNADLARIINSDEVQSVVRPIKTEVKRAXXXXXXXXXXXXXXXXXXYAKTARRMSLLAEAQ 500 +K SQ +R GKGKMRNRR I R+GP ++Y+ E ++KAFRNIPG APGGH+GRF +WT+SAF KLDE+YG + K + K Y LP KM+N DL+RI+ S E+Q +R + ++ R YAKT RR ++L +A+ Sbjct: 181 KKVYASQRMRAGKGKMRNRRRIQRRGPCIIYN-EDNGIIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNLPMHKMMNTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTILRQAR 345 The following BLAST results are available for this feature:
BLAST of CN186781 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 31
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Sequences
The
following sequences are available for this feature:
EST sequence >CN186781 ID=CN186781; Name=CN186781; organism=Citrus sinensis; type=EST; length=742bpback to top |