CN186746

Overview
NameCN186746
Unique NameCN186746
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length403
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3695 contig Csv1_Contig3695:298..700. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN186746 vs. ExPASy Swiss-Prot
Match: HPRT_STAAW (Hypoxanthine-guanine phosphoribosyltransferase OS=Staphylococcus aureus (strain MW2) GN=hpt PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 6.193e-21
Identity = 49/91 (53.85%), Postives = 64/91 (70.33%), Query Frame = 1
Query:    4 KHVILVEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKPARRKIHVELVGEGKFYRGFECPDYFVVGYGMDFAELYRNLPYVGVLKPECY 276
            K V+++EDI++TGTTL S+   L S+  +S+ + TLLDKP RRK  +E       Y G + PD FVVGYG+D+ ELYRNLPY+G LKPE Y
Sbjct:   92 KDVLIIEDILETGTTLKSITELLQSRKVNSLEIVTLLDKPNRRKADIEAK-----YVGKKIPDEFVVGYGLDYRELYRNLPYIGTLKPEVY 177          
BLAST of CN186746 vs. ExPASy Swiss-Prot
Match: HPRT_STAAS (Hypoxanthine-guanine phosphoribosyltransferase OS=Staphylococcus aureus (strain MSSA476) GN=hpt PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 6.193e-21
Identity = 49/91 (53.85%), Postives = 64/91 (70.33%), Query Frame = 1
Query:    4 KHVILVEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKPARRKIHVELVGEGKFYRGFECPDYFVVGYGMDFAELYRNLPYVGVLKPECY 276
            K V+++EDI++TGTTL S+   L S+  +S+ + TLLDKP RRK  +E       Y G + PD FVVGYG+D+ ELYRNLPY+G LKPE Y
Sbjct:   92 KDVLIIEDILETGTTLKSITELLQSRKVNSLEIVTLLDKPNRRKADIEAK-----YVGKKIPDEFVVGYGLDYRELYRNLPYIGTLKPEVY 177          
BLAST of CN186746 vs. ExPASy Swiss-Prot
Match: HPRT_STAAR (Hypoxanthine-guanine phosphoribosyltransferase OS=Staphylococcus aureus (strain MRSA252) GN=hpt PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 6.193e-21
Identity = 49/91 (53.85%), Postives = 64/91 (70.33%), Query Frame = 1
Query:    4 KHVILVEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKPARRKIHVELVGEGKFYRGFECPDYFVVGYGMDFAELYRNLPYVGVLKPECY 276
            K V+++EDI++TGTTL S+   L S+  +S+ + TLLDKP RRK  +E       Y G + PD FVVGYG+D+ ELYRNLPY+G LKPE Y
Sbjct:   92 KDVLIIEDILETGTTLKSITELLQSRKVNSLEIVTLLDKPNRRKADIEAK-----YVGKKIPDEFVVGYGLDYRELYRNLPYIGTLKPEVY 177          
BLAST of CN186746 vs. ExPASy Swiss-Prot
Match: HPRT_STAAN (Hypoxanthine-guanine phosphoribosyltransferase OS=Staphylococcus aureus (strain N315) GN=hpt PE=1 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 6.193e-21
Identity = 49/91 (53.85%), Postives = 64/91 (70.33%), Query Frame = 1
Query:    4 KHVILVEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKPARRKIHVELVGEGKFYRGFECPDYFVVGYGMDFAELYRNLPYVGVLKPECY 276
            K V+++EDI++TGTTL S+   L S+  +S+ + TLLDKP RRK  +E       Y G + PD FVVGYG+D+ ELYRNLPY+G LKPE Y
Sbjct:   92 KDVLIIEDILETGTTLKSITELLQSRKVNSLEIVTLLDKPNRRKADIEAK-----YVGKKIPDEFVVGYGLDYRELYRNLPYIGTLKPEVY 177          
BLAST of CN186746 vs. ExPASy Swiss-Prot
Match: HPRT_STAAM (Hypoxanthine-guanine phosphoribosyltransferase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=hpt PE=1 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 6.193e-21
Identity = 49/91 (53.85%), Postives = 64/91 (70.33%), Query Frame = 1
Query:    4 KHVILVEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKPARRKIHVELVGEGKFYRGFECPDYFVVGYGMDFAELYRNLPYVGVLKPECY 276
            K V+++EDI++TGTTL S+   L S+  +S+ + TLLDKP RRK  +E       Y G + PD FVVGYG+D+ ELYRNLPY+G LKPE Y
Sbjct:   92 KDVLIIEDILETGTTLKSITELLQSRKVNSLEIVTLLDKPNRRKADIEAK-----YVGKKIPDEFVVGYGLDYRELYRNLPYIGTLKPEVY 177          
BLAST of CN186746 vs. ExPASy Swiss-Prot
Match: HPRT_STAAC (Hypoxanthine-guanine phosphoribosyltransferase OS=Staphylococcus aureus (strain COL) GN=hpt PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 6.193e-21
Identity = 49/91 (53.85%), Postives = 64/91 (70.33%), Query Frame = 1
Query:    4 KHVILVEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKPARRKIHVELVGEGKFYRGFECPDYFVVGYGMDFAELYRNLPYVGVLKPECY 276
            K V+++EDI++TGTTL S+   L S+  +S+ + TLLDKP RRK  +E       Y G + PD FVVGYG+D+ ELYRNLPY+G LKPE Y
Sbjct:   92 KDVLIIEDILETGTTLKSITELLQSRKVNSLEIVTLLDKPNRRKADIEAK-----YVGKKIPDEFVVGYGLDYRELYRNLPYIGTLKPEVY 177          
BLAST of CN186746 vs. ExPASy Swiss-Prot
Match: HPRT_ENTFA (Hypoxanthine-guanine phosphoribosyltransferase OS=Enterococcus faecalis GN=hpt PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 3.073e-20
Identity = 46/92 (50.00%), Postives = 66/92 (71.74%), Query Frame = 1
Query:    4 KHVILVEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKPARRKIHVELVGEGKFYRGFECPDYFVVGYGMDFAELYRNLPYVGVLKPECYK 279
            +H+++VEDI+D+G TL+ L+     + A+SV + TLLDKP  R + ++       Y GF+ P+ FVVGYG+D+AE YRNLPY+GVLKPE Y+
Sbjct:   93 RHILIVEDIIDSGRTLAYLVDLFRYRKAASVKIVTLLDKPEGRVVDIKAD-----YVGFDVPNEFVVGYGLDYAETYRNLPYIGVLKPEVYE 179          
BLAST of CN186746 vs. ExPASy Swiss-Prot
Match: HPRT_STAES (Hypoxanthine-guanine phosphoribosyltransferase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=hpt PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 4.014e-20
Identity = 48/91 (52.75%), Postives = 63/91 (69.23%), Query Frame = 1
Query:    4 KHVILVEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKPARRKIHVELVGEGKFYRGFECPDYFVVGYGMDFAELYRNLPYVGVLKPECY 276
            K V+++EDI++TGTTL S+   L S+  +S+ + TLLDKP RRK  +E       Y G + PD FVVGYG+D+ ELYRNLPY+G LK E Y
Sbjct:   92 KDVLIIEDILETGTTLKSITELLQSRKVNSLEIATLLDKPNRRKADIEAK-----YVGKKIPDEFVVGYGLDYRELYRNLPYIGTLKAEVY 177          
BLAST of CN186746 vs. ExPASy Swiss-Prot
Match: HPRT_STAEQ (Hypoxanthine-guanine phosphoribosyltransferase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=hpt PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 4.014e-20
Identity = 48/91 (52.75%), Postives = 63/91 (69.23%), Query Frame = 1
Query:    4 KHVILVEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKPARRKIHVELVGEGKFYRGFECPDYFVVGYGMDFAELYRNLPYVGVLKPECY 276
            K V+++EDI++TGTTL S+   L S+  +S+ + TLLDKP RRK  +E       Y G + PD FVVGYG+D+ ELYRNLPY+G LK E Y
Sbjct:   92 KDVLIIEDILETGTTLKSITELLQSRKVNSLEIATLLDKPNRRKADIEAK-----YVGKKIPDEFVVGYGLDYRELYRNLPYIGTLKAEVY 177          
BLAST of CN186746 vs. ExPASy Swiss-Prot
Match: TILS_LISMO (Bifunctional protein tilS/hprT OS=Listeria monocytogenes GN=tilS/hprT PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 5.243e-20
Identity = 47/91 (51.65%), Postives = 64/91 (70.33%), Query Frame = 1
Query:    4 KHVILVEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKPARRKIHVELVGEGKFYRGFECPDYFVVGYGMDFAELYRNLPYVGVLKPECY 276
            + V+++EDI+D+G TLS L+  +  + A SV + TLLDKPA R + +E       Y GF  P+ FVVGYG+D+AE YRNLPY+G+LKPE Y
Sbjct:  561 RDVLVIEDIIDSGRTLSYLVDLIKYRKAKSVKLVTLLDKPAGRNVEIEAD-----YVGFVVPNEFVVGYGLDYAERYRNLPYIGILKPEIY 646          
The following BLAST results are available for this feature:
BLAST of CN186746 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 43
Match NameE-valueIdentityDescription
HPRT_STAAW6.193e-2153.85Hypoxanthine-guanine phosphoribosyltransferase OS=... [more]
HPRT_STAAS6.193e-2153.85Hypoxanthine-guanine phosphoribosyltransferase OS=... [more]
HPRT_STAAR6.193e-2153.85Hypoxanthine-guanine phosphoribosyltransferase OS=... [more]
HPRT_STAAN6.193e-2153.85Hypoxanthine-guanine phosphoribosyltransferase OS=... [more]
HPRT_STAAM6.193e-2153.85Hypoxanthine-guanine phosphoribosyltransferase OS=... [more]
HPRT_STAAC6.193e-2153.85Hypoxanthine-guanine phosphoribosyltransferase OS=... [more]
HPRT_ENTFA3.073e-2050.00Hypoxanthine-guanine phosphoribosyltransferase OS=... [more]
HPRT_STAES4.014e-2052.75Hypoxanthine-guanine phosphoribosyltransferase OS=... [more]
HPRT_STAEQ4.014e-2052.75Hypoxanthine-guanine phosphoribosyltransferase OS=... [more]
TILS_LISMO5.243e-2051.65Bifunctional protein tilS/hprT OS=Listeria monocyt... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0003G01_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0003G01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186746 ID=CN186746; Name=CN186746; organism=Citrus sinensis; type=EST; length=403bp
ATTAAGCACGTAATCTTGGTCGAGGACATTGTAGATACAGGAACCACATT
ATCATCTCTTATTGCAAACTTGGTATCCAAAGGAGCATCTTCTGTCTCAG
TCTGCACTCTCCTTGATAAACCAGCCAGAAGAAAGATTCACGTGGAGCTA
GTGGGTGAAGGAAAGTTCTATCGGGGATTTGAGTGTCCAGATTATTTCGT
TGTGGGCTATGGAATGGACTTCGCTGAATTATATAGGAACCTGCCTTATG
TTGGAGTGTTGAAGCCTGAATGCTACAAATAATTTTATCCGTCACTGGCT
CTTTGACAGGGCGGTCAATAAACTTATTCTACAAATCCAGACTCTTTGCA
ACTTCTACAGATTCTTGGCATTTGGTAATTGATGATAAATGCAGTTCTAA
AAA
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