CN186745

Overview
NameCN186745
Unique NameCN186745
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length393
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3695 contig Csv1_Contig3695:298..690. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN186745 vs. ExPASy Swiss-Prot
Match: HPRT_STAAW (Hypoxanthine-guanine phosphoribosyltransferase OS=Staphylococcus aureus (strain MW2) GN=hpt PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 4.643e-21
Identity = 49/91 (53.85%), Postives = 64/91 (70.33%), Query Frame = -1
Query:  118 KHVILVEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKPARRKIQVELVGEGKFYRGFECPDYFVVGYGMDFAELYRNLPYVGVLKPECY 390
            K V+++EDI++TGTTL S+   L S+  +S+ + TLLDKP RRK  +E       Y G + PD FVVGYG+D+ ELYRNLPY+G LKPE Y
Sbjct:   92 KDVLIIEDILETGTTLKSITELLQSRKVNSLEIVTLLDKPNRRKADIEAK-----YVGKKIPDEFVVGYGLDYRELYRNLPYIGTLKPEVY 177          
BLAST of CN186745 vs. ExPASy Swiss-Prot
Match: HPRT_STAAS (Hypoxanthine-guanine phosphoribosyltransferase OS=Staphylococcus aureus (strain MSSA476) GN=hpt PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 4.643e-21
Identity = 49/91 (53.85%), Postives = 64/91 (70.33%), Query Frame = -1
Query:  118 KHVILVEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKPARRKIQVELVGEGKFYRGFECPDYFVVGYGMDFAELYRNLPYVGVLKPECY 390
            K V+++EDI++TGTTL S+   L S+  +S+ + TLLDKP RRK  +E       Y G + PD FVVGYG+D+ ELYRNLPY+G LKPE Y
Sbjct:   92 KDVLIIEDILETGTTLKSITELLQSRKVNSLEIVTLLDKPNRRKADIEAK-----YVGKKIPDEFVVGYGLDYRELYRNLPYIGTLKPEVY 177          
BLAST of CN186745 vs. ExPASy Swiss-Prot
Match: HPRT_STAAR (Hypoxanthine-guanine phosphoribosyltransferase OS=Staphylococcus aureus (strain MRSA252) GN=hpt PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 4.643e-21
Identity = 49/91 (53.85%), Postives = 64/91 (70.33%), Query Frame = -1
Query:  118 KHVILVEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKPARRKIQVELVGEGKFYRGFECPDYFVVGYGMDFAELYRNLPYVGVLKPECY 390
            K V+++EDI++TGTTL S+   L S+  +S+ + TLLDKP RRK  +E       Y G + PD FVVGYG+D+ ELYRNLPY+G LKPE Y
Sbjct:   92 KDVLIIEDILETGTTLKSITELLQSRKVNSLEIVTLLDKPNRRKADIEAK-----YVGKKIPDEFVVGYGLDYRELYRNLPYIGTLKPEVY 177          
BLAST of CN186745 vs. ExPASy Swiss-Prot
Match: HPRT_STAAN (Hypoxanthine-guanine phosphoribosyltransferase OS=Staphylococcus aureus (strain N315) GN=hpt PE=1 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 4.643e-21
Identity = 49/91 (53.85%), Postives = 64/91 (70.33%), Query Frame = -1
Query:  118 KHVILVEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKPARRKIQVELVGEGKFYRGFECPDYFVVGYGMDFAELYRNLPYVGVLKPECY 390
            K V+++EDI++TGTTL S+   L S+  +S+ + TLLDKP RRK  +E       Y G + PD FVVGYG+D+ ELYRNLPY+G LKPE Y
Sbjct:   92 KDVLIIEDILETGTTLKSITELLQSRKVNSLEIVTLLDKPNRRKADIEAK-----YVGKKIPDEFVVGYGLDYRELYRNLPYIGTLKPEVY 177          
BLAST of CN186745 vs. ExPASy Swiss-Prot
Match: HPRT_STAAM (Hypoxanthine-guanine phosphoribosyltransferase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=hpt PE=1 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 4.643e-21
Identity = 49/91 (53.85%), Postives = 64/91 (70.33%), Query Frame = -1
Query:  118 KHVILVEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKPARRKIQVELVGEGKFYRGFECPDYFVVGYGMDFAELYRNLPYVGVLKPECY 390
            K V+++EDI++TGTTL S+   L S+  +S+ + TLLDKP RRK  +E       Y G + PD FVVGYG+D+ ELYRNLPY+G LKPE Y
Sbjct:   92 KDVLIIEDILETGTTLKSITELLQSRKVNSLEIVTLLDKPNRRKADIEAK-----YVGKKIPDEFVVGYGLDYRELYRNLPYIGTLKPEVY 177          
BLAST of CN186745 vs. ExPASy Swiss-Prot
Match: HPRT_STAAC (Hypoxanthine-guanine phosphoribosyltransferase OS=Staphylococcus aureus (strain COL) GN=hpt PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 4.643e-21
Identity = 49/91 (53.85%), Postives = 64/91 (70.33%), Query Frame = -1
Query:  118 KHVILVEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKPARRKIQVELVGEGKFYRGFECPDYFVVGYGMDFAELYRNLPYVGVLKPECY 390
            K V+++EDI++TGTTL S+   L S+  +S+ + TLLDKP RRK  +E       Y G + PD FVVGYG+D+ ELYRNLPY+G LKPE Y
Sbjct:   92 KDVLIIEDILETGTTLKSITELLQSRKVNSLEIVTLLDKPNRRKADIEAK-----YVGKKIPDEFVVGYGLDYRELYRNLPYIGTLKPEVY 177          
BLAST of CN186745 vs. ExPASy Swiss-Prot
Match: HPRT_ENTFA (Hypoxanthine-guanine phosphoribosyltransferase OS=Enterococcus faecalis GN=hpt PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 2.304e-20
Identity = 46/92 (50.00%), Postives = 66/92 (71.74%), Query Frame = -1
Query:  115 KHVILVEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKPARRKIQVELVGEGKFYRGFECPDYFVVGYGMDFAELYRNLPYVGVLKPECYK 390
            +H+++VEDI+D+G TL+ L+     + A+SV + TLLDKP  R + ++       Y GF+ P+ FVVGYG+D+AE YRNLPY+GVLKPE Y+
Sbjct:   93 RHILIVEDIIDSGRTLAYLVDLFRYRKAASVKIVTLLDKPEGRVVDIKAD-----YVGFDVPNEFVVGYGLDYAETYRNLPYIGVLKPEVYE 179          
BLAST of CN186745 vs. ExPASy Swiss-Prot
Match: TILS_LISMO (Bifunctional protein tilS/hprT OS=Listeria monocytogenes GN=tilS/hprT PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 3.009e-20
Identity = 47/91 (51.65%), Postives = 65/91 (71.43%), Query Frame = -1
Query:  118 KHVILVEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKPARRKIQVELVGEGKFYRGFECPDYFVVGYGMDFAELYRNLPYVGVLKPECY 390
            + V+++EDI+D+G TLS L+  +  + A SV + TLLDKPA R +++E       Y GF  P+ FVVGYG+D+AE YRNLPY+G+LKPE Y
Sbjct:  561 RDVLVIEDIIDSGRTLSYLVDLIKYRKAKSVKLVTLLDKPAGRNVEIEAD-----YVGFVVPNEFVVGYGLDYAERYRNLPYIGILKPEIY 646          
BLAST of CN186745 vs. ExPASy Swiss-Prot
Match: TILS_LISMF (Bifunctional protein tilS/hprT OS=Listeria monocytogenes serotype 4b (strain F2365) GN=tilS/hprT PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 3.009e-20
Identity = 47/91 (51.65%), Postives = 65/91 (71.43%), Query Frame = -1
Query:  118 KHVILVEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKPARRKIQVELVGEGKFYRGFECPDYFVVGYGMDFAELYRNLPYVGVLKPECY 390
            + V+++EDI+D+G TLS L+  +  + A SV + TLLDKPA R +++E       Y GF  P+ FVVGYG+D+AE YRNLPY+G+LKPE Y
Sbjct:  561 RDVLVIEDIIDSGRTLSYLVDLIKYRKAKSVKLVTLLDKPAGRNVEIEAD-----YVGFVVPNEFVVGYGLDYAERYRNLPYIGILKPEIY 646          
BLAST of CN186745 vs. ExPASy Swiss-Prot
Match: HPRT_STAES (Hypoxanthine-guanine phosphoribosyltransferase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=hpt PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 3.009e-20
Identity = 48/91 (52.75%), Postives = 63/91 (69.23%), Query Frame = -1
Query:  118 KHVILVEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKPARRKIQVELVGEGKFYRGFECPDYFVVGYGMDFAELYRNLPYVGVLKPECY 390
            K V+++EDI++TGTTL S+   L S+  +S+ + TLLDKP RRK  +E       Y G + PD FVVGYG+D+ ELYRNLPY+G LK E Y
Sbjct:   92 KDVLIIEDILETGTTLKSITELLQSRKVNSLEIATLLDKPNRRKADIEAK-----YVGKKIPDEFVVGYGLDYRELYRNLPYIGTLKAEVY 177          
The following BLAST results are available for this feature:
BLAST of CN186745 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 44
Match NameE-valueIdentityDescription
HPRT_STAAW4.643e-2153.85Hypoxanthine-guanine phosphoribosyltransferase OS=... [more]
HPRT_STAAS4.643e-2153.85Hypoxanthine-guanine phosphoribosyltransferase OS=... [more]
HPRT_STAAR4.643e-2153.85Hypoxanthine-guanine phosphoribosyltransferase OS=... [more]
HPRT_STAAN4.643e-2153.85Hypoxanthine-guanine phosphoribosyltransferase OS=... [more]
HPRT_STAAM4.643e-2153.85Hypoxanthine-guanine phosphoribosyltransferase OS=... [more]
HPRT_STAAC4.643e-2153.85Hypoxanthine-guanine phosphoribosyltransferase OS=... [more]
HPRT_ENTFA2.304e-2050.00Hypoxanthine-guanine phosphoribosyltransferase OS=... [more]
TILS_LISMO3.009e-2051.65Bifunctional protein tilS/hprT OS=Listeria monocyt... [more]
TILS_LISMF3.009e-2051.65Bifunctional protein tilS/hprT OS=Listeria monocyt... [more]
HPRT_STAES3.009e-2052.75Hypoxanthine-guanine phosphoribosyltransferase OS=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0003G01_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0003G01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186745 ID=CN186745; Name=CN186745; organism=Citrus sinensis; type=EST; length=393bp
ACTGCATTTATCATCATTACCAATGCCAAGAATCTGTAGAACCTGTAAAG
AGTCTGGATTTGTAGAATAAGTTTATTGACCGCCCTGTCAAAGAGCCAGT
GACGGATAAAATTATTTGTAGCATTCAGGCTTCAACACTCCAACATAAGG
CAGGTTCCTATATAATTCAGCGAAGTCCATTCCATAGCCCACAACGAAAT
AATCTGGACACTCAAATCCCCGATAGAACTTTCCTTCACCCACTAGCTCC
ACCTGAATCTTTCTTCTGGCTGGTTTATCAAGGAGAGTGCAGACTGAGAC
AGAAGATGCTCCTTTGGATACCAAGTTTGCAATAAGAGATGATAATGTGG
TTCCTGTATCTACAATGTCCTCGACCAAGATTACGTGCTTCCT
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