CX675118
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX675118 vs. ExPASy Swiss-Prot
Match: SSG1_IPOBA (Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Ipomoea batatas GN=WAXY PE=2 SV=2) HSP 1 Score: 136.732 bits (343), Expect = 6.792e-32 Identity = 66/91 (72.53%), Postives = 75/91 (82.42%), Query Frame = -1 Query: 273 GFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQASAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAGSEPGIDGEEIAPLAKENVATP 545 GF MG+F+VDCE VDP DV V TTV RALA YGT A EM+KN M+Q+LSWKGPAK WE LL+L VAGSEPG++G+EIAPLAKENVATP Sbjct: 518 GFHMGAFNVDCETVDPEDVLKVITTVGRALAMYGTLAFTEMIKNCMSQELSWKGPAKNWETVLLSLGVAGSEPGVEGDEIAPLAKENVATP 608
BLAST of CX675118 vs. ExPASy Swiss-Prot
Match: SSG1_ANTMA (Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Antirrhinum majus GN=WAXY PE=2 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 6.792e-32 Identity = 64/91 (70.33%), Postives = 76/91 (83.52%), Query Frame = -1 Query: 273 GFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQASAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAGSEPGIDGEEIAPLAKENVATP 545 GF MG+F+V+C VDP DV ++TTV RALA YG+ A EM++N MAQDLSWKGPAK WE+ LL+L V+GSEPG+DGEEIAPLAKENVATP Sbjct: 518 GFHMGAFNVECATVDPADVQKIATTVERALAAYGSVAYKEMIQNCMAQDLSWKGPAKNWEKMLLSLGVSGSEPGVDGEEIAPLAKENVATP 608
BLAST of CX675118 vs. ExPASy Swiss-Prot
Match: SSG1_SOLTU (Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Solanum tuberosum GN=WAXY PE=1 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 1.673e-30 Identity = 62/91 (68.13%), Postives = 74/91 (81.32%), Query Frame = -1 Query: 273 GFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQASAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAGSEPGIDGEEIAPLAKENVATP 545 GF MG+F+V+C+ VDP DV + TTV RALA YGT A AEM+KN M+++LSWK PAKKWE LL L +GSEPG++GEEIAPLAKENVATP Sbjct: 517 GFHMGAFNVECDVVDPADVLKIVTTVARALAVYGTLAFAEMIKNCMSEELSWKEPAKKWETLLLGLGASGSEPGVEGEEIAPLAKENVATP 607
BLAST of CX675118 vs. ExPASy Swiss-Prot
Match: SSG1B_HORVU (Granule-bound starch synthase 1b, chloroplastic/amyloplastic (Fragment) OS=Hordeum vulgare PE=1 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 3.155e-29 Identity = 63/91 (69.23%), Postives = 72/91 (79.12%), Query Frame = -1 Query: 273 GFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQASAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAGSEPGIDGEEIAPLAKENVATP 545 GF MGSF+V+ E VDP DVAAV + V RAL Y T M++N MAQDLSWKGPAKKWEE LL+L V GS+PGI+GEEIAPLAK+NVATP Sbjct: 475 GFHMGSFNVEFETVDPTDVAAVGSNVTRALKQYRTPVFHAMVQNCMAQDLSWKGPAKKWEEALLSLGVEGSQPGIEGEEIAPLAKQNVATP 565
BLAST of CX675118 vs. ExPASy Swiss-Prot
Match: SSG1_SORBI (Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Sorghum bicolor GN=WAXY PE=2 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 4.120e-29 Identity = 61/91 (67.03%), Postives = 69/91 (75.82%), Query Frame = -1 Query: 273 GFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQASAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAGSEPGIDGEEIAPLAKENVATP 545 GF MG SVDC V+P DV V+TT++RA+ GT A EM+KN M QDLSWKGPAK WE LL+L VAG EPGI+GEEIAPLAKENVA P Sbjct: 518 GFHMGRLSVDCNVVEPADVKKVATTLKRAIKVVGTPAYEEMVKNCMIQDLSWKGPAKNWENVLLSLGVAGGEPGIEGEEIAPLAKENVAAP 608
BLAST of CX675118 vs. ExPASy Swiss-Prot
Match: SSG1_MANES (Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Manihot esculenta GN=WAXY PE=2 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 4.120e-29 Identity = 61/91 (67.03%), Postives = 71/91 (78.02%), Query Frame = -1 Query: 273 GFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQASAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAGSEPGIDGEEIAPLAKENVATP 545 GFQMG+ V+C+ +D DVAA+ TV RAL TY T A EM+ N MAQDLSWKGPA+ WE+ LL+LEV GSEPG +GEEIAPLAKENV TP Sbjct: 518 GFQMGALHVECDKIDSADVAAIVKTVARALGTYATAALREMILNCMAQDLSWKGPARMWEKMLLDLEVTGSEPGTEGEEIAPLAKENVPTP 608
BLAST of CX675118 vs. ExPASy Swiss-Prot
Match: SSG1_ORYSA (Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Oryza sativa GN=WAXY PE=3 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 1.566e-28 Identity = 60/91 (65.93%), Postives = 70/91 (76.92%), Query Frame = -1 Query: 273 GFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQASAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAGSEPGIDGEEIAPLAKENVATP 545 GF MG SVDC+ V+P DV V+TT++RA+ GT A EM++N M QDLSWKGPAK WE LL L VAGSEPG++GEEIAPLAKENVA P Sbjct: 516 GFHMGRLSVDCKVVEPSDVQKVATTLKRAIKIVGTPAYNEMVRNCMNQDLSWKGPAKNWENVLLGLGVAGSEPGVEGEEIAPLAKENVAAP 606
BLAST of CX675118 vs. ExPASy Swiss-Prot
Match: SSG1_MAIZE (Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Zea mays GN=WAXY PE=3 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 1.566e-28 Identity = 59/91 (64.84%), Postives = 69/91 (75.82%), Query Frame = -1 Query: 273 GFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQASAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAGSEPGIDGEEIAPLAKENVATP 545 GF MG SVDC V+P DV V+TT++RA+ GT A EM++N M QDLSWKGPAK WE LL+L VAG EPG++GEEIAPLAKENVA P Sbjct: 515 GFHMGRLSVDCNVVEPADVKKVATTLQRAIKVVGTPAYEEMVRNCMIQDLSWKGPAKNWENVLLSLGVAGGEPGVEGEEIAPLAKENVAAP 605
BLAST of CX675118 vs. ExPASy Swiss-Prot
Match: SSG1_ARATH (Probable granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Arabidopsis thaliana GN=WAXY PE=2 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 4.556e-28 Identity = 60/91 (65.93%), Postives = 69/91 (75.82%), Query Frame = -1 Query: 273 GFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQASAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAGSEPGIDGEEIAPLAKENVATP 545 GF +G F+V CE VDP DV A + V RA+A YGT A EM+KN M QD SWKGPA+ WE+ LL+L VAGSE G +GEEIAPLAKENVATP Sbjct: 520 GFHIGRFNVKCEVVDPDDVIATAKAVTRAVAVYGTSAMQEMVKNCMDQDFSWKGPARLWEKVLLSLNVAGSEAGTEGEEIAPLAKENVATP 610
BLAST of CX675118 vs. ExPASy Swiss-Prot
Match: SSG1_HORVU (Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Hordeum vulgare GN=WAXY PE=1 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.015e-27 Identity = 60/91 (65.93%), Postives = 67/91 (73.63%), Query Frame = -1 Query: 273 GFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQASAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAGSEPGIDGEEIAPLAKENVATP 545 GF MG SVDC V+P DV V+TT++RA+ GT A EM+KN M QDLSWKGPAK WE+ LL L V GSEPGI GEEIAPLA ENVA P Sbjct: 513 GFHMGRLSVDCNVVEPADVKKVATTLKRAVKVVGTPAYQEMVKNCMIQDLSWKGPAKNWEDVLLELGVEGSEPGIVGEEIAPLAMENVAAP 603 The following BLAST results are available for this feature:
BLAST of CX675118 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 15
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Sequences
The
following sequences are available for this feature:
EST sequence >CX675118 ID=CX675118; Name=CX675118; organism=Citrus sinensis; type=EST; length=545bpback to top |