CK936387

Overview
NameCK936387
Unique NameCK936387
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length840
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3163 contig Csv1_Contig3163:110..949. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK936387 vs. ExPASy Swiss-Prot
Match: CYSK_CITLA (Cysteine synthase OS=Citrullus lanatus PE=2 SV=1)

HSP 1 Score: 340.502 bits (872), Expect = 7.005e-93
Identity = 168/240 (70.00%), Postives = 196/240 (81.67%), Query Frame = 3
Query:  120 KCEIKKDVTELIGHTPMVYLNNVVDGCVARIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPGKTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFXXXXXXXXXXXXXXRFLKEKNPNIKVYGIEPSESAVLNGGQPGKHLIQGIGAGVIPPVLDVAMLD 839
            K  I KDVTELIG+TP+VYLN VVDGCVAR+AAKLEMM+PCSSVKDRI YSMI DAE+KGLITPG++VLIE TSGNTGIGLAFIAA++GY+LII MP++ S+ERR ILRA GAE+ L DPA G +G V+K EEI  +TPN YIL QFENPANP+IHYETTGPEIW  SGGK+DA               ++LKE+NPNIK+YG+EP ESA+L+GG+PG H IQGIGAG IP VLDV +LD
Sbjct:    5 KSTIAKDVTELIGNTPLVYLNRVVDGCVARVAAKLEMMEPCSSVKDRIGYSMISDAENKGLITPGESVLIEPTSGNTGIGLAFIAAAKGYRLIICMPASMSLERRTILRAFGAELVLTDPARGMKGAVQKAEEIKAKTPNSYILQQFENPANPKIHYETTGPEIWRGSGGKIDALVSGIGTGGTVTGAGKYLKEQNPNIKLYGVEPVESAILSGGKPGPHKIQGIGAGFIPGVLDVNLLD 244          
BLAST of CK936387 vs. ExPASy Swiss-Prot
Match: CYSK_SOLTU (Cysteine synthase OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 329.331 bits (843), Expect = 1.615e-89
Identity = 160/241 (66.39%), Postives = 193/241 (80.08%), Query Frame = 3
Query:  117 DKCEIKKDVTELIGHTPMVYLNNVVDGCVARIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPGKTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFXXXXXXXXXXXXXXRFLKEKNPNIKVYGIEPSESAVLNGGQPGKHLIQGIGAGVIPPVLDVAMLD 839
            +K  I KDVTELIG+TP+VYLNNVVDGCVAR+AAKLE M+PCSSVKDRI YSMI DAE+KGLI PG++VLIE TSGNTG+GLAF+AA++GYKLII MPS+ S+ERRIILR   +E+ L DPA G +G + K EEI  +TPN YIL QFENPANP+IHYETTGPEIW  S GKVDA               ++L+E+NPN+K+YG+EP ESA+L+GG+PG H IQGIGAG IP VL+V ++D
Sbjct:    4 EKIGIAKDVTELIGNTPLVYLNNVVDGCVARVAAKLESMEPCSSVKDRIGYSMITDAEEKGLIKPGESVLIEPTSGNTGVGLAFMAAAKGYKLIITMPSSMSLERRIILRGFRSELVLTDPAKGMKGAISKAEEIKAKTPNSYILQQFENPANPKIHYETTGPEIWKGSNGKVDALASGIGTGGTITGSGKYLREQNPNVKLYGVEPVESAILSGGKPGPHKIQGIGAGFIPGVLEVNLID 244          
BLAST of CK936387 vs. ExPASy Swiss-Prot
Match: CYSK_SPIOL (Cysteine synthase OS=Spinacia oleracea PE=1 SV=1)

HSP 1 Score: 327.405 bits (838), Expect = 6.137e-89
Identity = 160/243 (65.84%), Postives = 194/243 (79.84%), Query Frame = 3
Query:  111 MEDKCEIKKDVTELIGHTPMVYLNNVVDGCVARIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPGKTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFXXXXXXXXXXXXXXRFLKEKNPNIKVYGIEPSESAVLNGGQPGKHLIQGIGAGVIPPVLDVAMLD 839
            +E+K  I KDVTELIG TP+VYLN V DGCVAR+AAKLE M+PCSSVKDRI +SMI DAE  GLITPG++VLIE TSGNTGIGLAFIAA++GYKLII MP++ S+ERR ILRA GAE+ L DPA G +G V+K EEI ++TPN YIL QFENPANP++HYETTGPEIW  +GGK+D F              ++LKE+NP++K+ G+EP ESAVL+GG+PG H IQG+GAG IP VLDV ++D
Sbjct:    2 VEEKAFIAKDVTELIGKTPLVYLNTVADGCVARVAAKLEGMEPCSSVKDRIGFSMITDAEKSGLITPGESVLIEPTSGNTGIGLAFIAAAKGYKLIITMPASMSLERRTILRAFGAELILTDPAKGMKGAVQKAEEIRDKTPNSYILQQFENPANPKVHYETTGPEIWKGTGGKIDIFVSGIGTGGTITGAGKYLKEQNPDVKLIGLEPVESAVLSGGKPGPHKIQGLGAGFIPGVLDVNIID 244          
BLAST of CK936387 vs. ExPASy Swiss-Prot
Match: CYSK1_BRAJU (Cysteine synthase OS=Brassica juncea PE=2 SV=1)

HSP 1 Score: 327.02 bits (837), Expect = 8.015e-89
Identity = 156/237 (65.82%), Postives = 190/237 (80.17%), Query Frame = 3
Query:  129 IKKDVTELIGHTPMVYLNNVVDGCVARIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPGKTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFXXXXXXXXXXXXXXRFLKEKNPNIKVYGIEPSESAVLNGGQPGKHLIQGIGAGVIPPVLDVAMLD 839
            I KDVTELIG+TP+VYLNNV +GCV R+AAKLEMM+PCSSVKDRI +SMI DAE KGLI PG++VLIE TSGNTG+GLAF AA++GYKLII MP++ S+ERRIIL A G E+ L DPA G +G + K EEIL +TPNGY+L QFENPANP+IHYETTGPEIW  + GK+D F              ++LKE+NPN+K+YG+EP ESA+L+GG+PG H IQGIGAG IP VL+V ++D
Sbjct:    5 IAKDVTELIGNTPLVYLNNVAEGCVGRVAAKLEMMEPCSSVKDRIGFSMISDAEQKGLIKPGESVLIEPTSGNTGVGLAFTAAAKGYKLIITMPASMSVERRIILLAFGVELVLTDPAKGMKGAIAKAEEILAKTPNGYMLQQFENPANPKIHYETTGPEIWKGTDGKIDGFVSGIGTGGTITGAGKYLKEQNPNVKLYGVEPIESAILSGGKPGPHKIQGIGAGFIPSVLEVDLID 241          
BLAST of CK936387 vs. ExPASy Swiss-Prot
Match: CYSK_MAIZE (Cysteine synthase OS=Zea mays PE=1 SV=2)

HSP 1 Score: 324.324 bits (830), Expect = 5.195e-88
Identity = 159/237 (67.09%), Postives = 187/237 (78.90%), Query Frame = 3
Query:  129 IKKDVTELIGHTPMVYLNNVVDGCVARIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPGKTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFXXXXXXXXXXXXXXRFLKEKNPNIKVYGIEPSESAVLNGGQPGKHLIQGIGAGVIPPVLDVAMLD 839
            I KDVTELIG+TP+VYLN V DGCV R  AKLE M+PCSSVKDRI YSMI DAE+KGLITPG +VLIE TSGNTGIGLAF+AA++GYKL + MP++ S+ERRIIL+A GAE+ L DP +G +G VKK EEI  +TPN YIL QFENPANP+IHYETTGPEIW  + GK+D                R+L+E+NPN+K+YG+EP ESAVLNGG+PG H IQGIGAG IP VLDV +LD
Sbjct:    8 IAKDVTELIGNTPLVYLNKVTDGCVGRSRAKLESMEPCSSVKDRIGYSMITDAEEKGLITPGVSVLIEPTSGNTGIGLAFMAAAKGYKLTLTMPASMSMERRIILKAFGAELVLTDPLLGMKGAVKKAEEIQAKTPNSYILQQFENPANPKIHYETTGPEIWKATAGKIDGLVSGIGTGGTITGTGRYLREQNPNVKLYGVEPVESAVLNGGKPGPHKIQGIGAGFIPGVLDVDLLD 244          
BLAST of CK936387 vs. ExPASy Swiss-Prot
Match: CYSK1_ARATH (Cysteine synthase OS=Arabidopsis thaliana GN=OASA1 PE=1 SV=2)

HSP 1 Score: 324.324 bits (830), Expect = 5.195e-88
Identity = 156/237 (65.82%), Postives = 189/237 (79.75%), Query Frame = 3
Query:  129 IKKDVTELIGHTPMVYLNNVVDGCVARIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPGKTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFXXXXXXXXXXXXXXRFLKEKNPNIKVYGIEPSESAVLNGGQPGKHLIQGIGAGVIPPVLDVAMLD 839
            I KDVTELIG+TP+VYLNNV +GCV R+AAKLEMM+PCSSVKDRI +SMI DAE KGLI PG++VLIE TSGNTG+GLAF AA++GYKLII MP++ S ERRIIL A G E+ L DPA G +G + K EEIL +TPNGY+L QFENPANP+IHYETTGPEIW  +GGK+D F              ++LKE+N N+K+YG+EP ESA+L+GG+PG H IQGIGAG IP VL+V ++D
Sbjct:    5 IAKDVTELIGNTPLVYLNNVAEGCVGRVAAKLEMMEPCSSVKDRIGFSMISDAEKKGLIKPGESVLIEPTSGNTGVGLAFTAAAKGYKLIITMPASMSTERRIILLAFGVELVLTDPAKGMKGAIAKAEEILAKTPNGYMLQQFENPANPKIHYETTGPEIWKGTGGKIDGFVSGIGTGGTITGAGKYLKEQNANVKLYGVEPVESAILSGGKPGPHKIQGIGAGFIPSVLNVDLID 241          
BLAST of CK936387 vs. ExPASy Swiss-Prot
Match: CYSK_WHEAT (Cysteine synthase OS=Triticum aestivum GN=CYS1 PE=2 SV=1)

HSP 1 Score: 323.939 bits (829), Expect = 6.785e-88
Identity = 154/237 (64.98%), Postives = 190/237 (80.17%), Query Frame = 3
Query:  129 IKKDVTELIGHTPMVYLNNVVDGCVARIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPGKTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFXXXXXXXXXXXXXXRFLKEKNPNIKVYGIEPSESAVLNGGQPGKHLIQGIGAGVIPPVLDVAMLD 839
            I KDVTELIG+TP+VYLN V DGCV R+AAKLE M+PCSSVKDRI YSMI DAE+KG I PGK+VLIE TSGNTGIGLAF+AA++GY+L++ MP++ S+ERRIIL+A GAE+ L DP +G +G V+K EE+  +TPN YIL QFEN ANP+IHYETTGPEIW  +GGK+D                ++L+E+NPNIK+YG+EP+ESA+LNGG+PG H IQGIGAG IP VLDV ++D
Sbjct:    9 IAKDVTELIGNTPLVYLNKVTDGCVGRVAAKLESMEPCSSVKDRIGYSMITDAEEKGFIVPGKSVLIEPTSGNTGIGLAFMAAAKGYRLVLTMPASMSMERRIILKAFGAELILTDPLLGMKGAVQKAEELAAKTPNSYILQQFENAANPKIHYETTGPEIWKGTGGKIDGLVSGIGTGGTITGTGKYLQEQNPNIKLYGVEPTESAILNGGKPGPHKIQGIGAGFIPGVLDVDIID 245          
BLAST of CK936387 vs. ExPASy Swiss-Prot
Match: CYSK2_BRAJU (Cysteine synthase OS=Brassica juncea PE=2 SV=1)

HSP 1 Score: 322.013 bits (824), Expect = 2.578e-87
Identity = 155/243 (63.79%), Postives = 190/243 (78.19%), Query Frame = 3
Query:  111 MEDKCEIKKDVTELIGHTPMVYLNNVVDGCVARIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPGKTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFXXXXXXXXXXXXXXRFLKEKNPNIKVYGIEPSESAVLNGGQPGKHLIQGIGAGVIPPVLDVAMLD 839
            M  +  I  DVTELIG+TP+VYLN+V +GCV R+AAKLEMM+PCSSVKDRI +SMI DAE KGLI PG++VLIE TSGNTG+GLAF AA++GYKLII MP++ SIERRIIL A G E+ L DPA G +G + K EEIL +TPNGY+L QFENPANP+IHYETTGPEIW  + GK+D F              ++LKE+NPN+K+YG+EP ESA+L+GG+PG H IQGIGAG IP VL+  ++D
Sbjct:    1 MASRIGIANDVTELIGNTPLVYLNSVAEGCVGRVAAKLEMMEPCSSVKDRIGFSMISDAEKKGLIKPGESVLIEPTSGNTGVGLAFTAAAKGYKLIITMPASMSIERRIILLAFGVELVLTDPAKGMKGAIAKAEEILAKTPNGYMLQQFENPANPKIHYETTGPEIWKGTEGKIDGFISGIGTGGTITGAGKYLKEQNPNVKLYGVEPVESAILSGGKPGPHKIQGIGAGFIPNVLETNLID 243          
BLAST of CK936387 vs. ExPASy Swiss-Prot
Match: CYSKP_SOLTU (Cysteine synthase, chloroplastic/chromoplastic OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 321.627 bits (823), Expect = 3.368e-87
Identity = 157/237 (66.24%), Postives = 188/237 (79.32%), Query Frame = 3
Query:  129 IKKDVTELIGHTPMVYLNNVVDGCVARIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPGKTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFXXXXXXXXXXXXXXRFLKEKNPNIKVYGIEPSESAVLNGGQPGKHLIQGIGAGVIPPVLDVAMLD 839
            I +DVT+LIG+TPMVYLN +  GCVA IAAKLE+M+PC SVKDRI +SMI DAE+KGLI+PGKTVL+E TSGNTGIGLAFIAASRGYKLI+ MP++ S+ERR+IL+A GAE+ L DPA G +G V K EEILN TP+ YIL QF+NPANP+IHYETTGPEIW D+ GK+D                RFLKE+NPNIK+ G+EP+ES VL+GG+PG H IQGIGAG IP  LD  ++D
Sbjct:   69 IAEDVTQLIGNTPMVYLNTIAKGCVANIAAKLEIMEPCCSVKDRIGFSMIVDAEEKGLISPGKTVLVEPTSGNTGIGLAFIAASRGYKLILTMPASMSLERRVILKAFGAELVLTDPAKGMKGAVSKAEEILNNTPDAYILQQFDNPANPKIHYETTGPEIWEDTKGKIDILVAGIGTGGTITGTGRFLKEQNPNIKIIGVEPTESNVLSGGKPGPHKIQGIGAGFIPGNLDQDVMD 305          
BLAST of CK936387 vs. ExPASy Swiss-Prot
Match: CYSK1_ORYSJ (Cysteine synthase OS=Oryza sativa subsp. japonica GN=RCS1 PE=2 SV=2)

HSP 1 Score: 321.627 bits (823), Expect = 3.368e-87
Identity = 154/237 (64.98%), Postives = 191/237 (80.59%), Query Frame = 3
Query:  129 IKKDVTELIGHTPMVYLNNVVDGCVARIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPGKTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFXXXXXXXXXXXXXXRFLKEKNPNIKVYGIEPSESAVLNGGQPGKHLIQGIGAGVIPPVLDVAMLD 839
            I KDVTELIG+TP+VYLN V DGCV R+AAKLE M+PCSSVKDRI YSMI DAE+KGLITPGK+VLIE TSGNTGIGLAF+AA++GY+L++ MP++ S+ERRIIL+A GAE+ L DP +G +G V+K EE+  +T N +IL QFENPANP+IHYETTGPEIW  +GGKVD                R+L+E+NP+IK+YG+EP ESAVL+GG+PG H IQGIGAG +P VLDV +++
Sbjct:    5 IAKDVTELIGNTPLVYLNRVTDGCVGRVAAKLESMEPCSSVKDRIGYSMITDAEEKGLITPGKSVLIEPTSGNTGIGLAFMAAAKGYRLVLTMPASMSMERRIILKAFGAELILTDPLLGMKGAVQKAEELAAKTNNSFILQQFENPANPKIHYETTGPEIWKGTGGKVDGLVSGIGTGGTITGAGRYLREQNPDIKIYGVEPVESAVLSGGKPGPHKIQGIGAGFVPGVLDVDLIN 241          
The following BLAST results are available for this feature:
BLAST of CK936387 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 67
Match NameE-valueIdentityDescription
CYSK_CITLA7.005e-9370.00Cysteine synthase OS=Citrullus lanatus PE=2 SV=1[more]
CYSK_SOLTU1.615e-8966.39Cysteine synthase OS=Solanum tuberosum PE=2 SV=1[more]
CYSK_SPIOL6.137e-8965.84Cysteine synthase OS=Spinacia oleracea PE=1 SV=1[more]
CYSK1_BRAJU8.015e-8965.82Cysteine synthase OS=Brassica juncea PE=2 SV=1[more]
CYSK_MAIZE5.195e-8867.09Cysteine synthase OS=Zea mays PE=1 SV=2[more]
CYSK1_ARATH5.195e-8865.82Cysteine synthase OS=Arabidopsis thaliana GN=OASA1... [more]
CYSK_WHEAT6.785e-8864.98Cysteine synthase OS=Triticum aestivum GN=CYS1 PE=... [more]
CYSK2_BRAJU2.578e-8763.79Cysteine synthase OS=Brassica juncea PE=2 SV=1[more]
CYSKP_SOLTU3.368e-8766.24Cysteine synthase, chloroplastic/chromoplastic OS=... [more]
CYSK1_ORYSJ3.368e-8764.98Cysteine synthase OS=Oryza sativa subsp. japonica ... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004383_A09 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0003_IF_A09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK936387 ID=CK936387; Name=CK936387; organism=Citrus sinensis; type=EST; length=840bp
GGGGAATGTATTTCACAGATAAATTACACCAGGAACTGGTATCTCCATTN
NNNNNNCCAAGTGCTAGGCTGGCTGCTTGATTTTTTGAAAGTTTTTGGTG
AAGTAGCTCCATGGAGGACAAGTGTGAAATTAAGAAAGACGTTACGGAAT
TAATAGGCCATACACCGATGGTGTATCTCAATAATGTTGTGGATGGTTGT
GTCGCCCGTATTGCTGCCAAGCTAGAAATGATGCAACCTTGCTCTAGCGT
CAAAGACAGAATTGCATATAGTATGATCAAAGATGCAGAGGATAAGGGCT
TAATAACCCCAGGGAAGACTGTCCTCATTGAGCTAACTAGTGGAAACACC
GGCATTGGATTGGCCTTCATTGCAGCATCAAGGGGTTACAAACTTATCAT
TATAATGCCATCAACATACAGTATTGAGAGAAGAATAATTCTCAGAGCTT
TGGGAGCTGAGGTTTATCTTGCAGATCCAGCAGTGGGCTTTGAGGGGTTT
GTTAAAAAGGGTGAGGAGATACTAAACAGAACACCTAATGGTTATATTCT
TGGACAATTTGAAAATCCCGCGAATCCGGAGATTCATTACGAGACAACTG
GCCCAGAGATATGGAACGACTCAGGAGGGAAGGTTGATGCTTTTATAGCA
GGGATAGGAACTGGTGGTACTGTAACTGGTGCGGGGAGATTCCTTAAAGA
AAAGAACCCAAATATTAAGGTATATGGTATAGAACCATCTGAAAGTGCAG
TCTTGAATGGAGGACAACCTGGGAAGCATCTGATCCAGGGTATTGGTGCC
GGTGTCATCCCTCCTGTTTTGGACGTTGCCATGCTCGATG
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