CK936377

Overview
NameCK936377
Unique NameCK936377
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length474
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CK936377 vs. ExPASy Swiss-Prot
Match: DRL31_ARATH (Putative disease resistance protein At5g05400 OS=Arabidopsis thaliana GN=At5g05400 PE=2 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 8.198e-11
Identity = 36/77 (46.75%), Postives = 48/77 (62.34%), Query Frame = 1 
Query:   40 FAELEFLSLWGGINLKSVYPNLLPFPKLKKIQVLHCRQLKKLPLNSSSAKLRRAVIEGTKKWWEELQWGDQATQNAF 270
            F ELEFL+L     LKS+Y + L F KLK+I +  C +L KLPL+S SA  +  VI   ++W + LQW D AT+  F
Sbjct:  795 FRELEFLTLRNLGQLKSIYRDPLLFGKLKEINIKSCPKLTKLPLDSRSAWKQNVVINAEEEWLQGLQWEDVATKERF 871
The following BLAST results are available for this feature:
BLAST of CK936377 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
DRL31_ARATH8.198e-1146.75Putative disease resistance protein At5g05400 OS=A... [more]
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Properties
Property NameValue
Genbank descriptionCGF1004383_B08 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0003_IF_B08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK936377 ID=CK936377; Name=CK936377; organism=Citrus sinensis; type=EST; length=474bp
GGGGATATTTCAGAGATAGTGGGGTCAGAGCATAACGTTTTCGCAGAACT
CGAATTTCTATCCTTATGGGGGGGAATAAATTTAAAGAGCGTTTACCCGA
ATCTCCTGCCCTTTCCAAAGTTGAAGAAAATTCAAGTACTTCATTGCCGA
CAGCTGAAGAAGCTCCCACTCAATTCCAGCAGCGCGAAGTTACGTCGAGC
TGTCATCGAGGGAACGAAAAAGTGGTGGGAAGAGCTACAATGGGGGGATC
AAGCCACCCAAAATGCTTTCTCTTCCGGTGCCGTACTTACTGAGTTTCCT
TTTTATTAATATGTTTTAATATGTATTTCTTTTTCTTTTCTTTTTTTAAT
TTTCATTAGATTTAATTGCATCTTGTTCTTGTTGTCTGGTGTGTCAATCG
TTCCCTACTTTCAGTTAATAAAATTTCGGCAGTGGATTCTTGGCCAAAAA
AAAAAAAAAAAAAAAAAAAAAAAA
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