CK936359

Overview
NameCK936359
Unique NameCK936359
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length842
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK936359 vs. ExPASy Swiss-Prot
Match: FABH_ARATH (3-oxoacyl-[acyl-carrier-protein] synthase III, chloroplastic OS=Arabidopsis thaliana GN=At1g62640 PE=2 SV=2)

HSP 1 Score: 317.775 bits (813), Expect = 4.842e-86
Identity = 161/228 (70.61%), Postives = 184/228 (80.70%), Query Frame = 1
Query:  163 MASASGLFT-PSVPSLRRRVQPSTWKYRSGFCFSQGTFRRVLCSSTIA-GXXXXXXXXXXRAPRLINRGCKLVGCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLFGGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGDAA 840
            MA+ASG FT PS+P+LR R+        SGFC S    +RVLCSS  +            + PRL+  GCKL+GCGSAVP+L ISNDDLAKIVDT+DEWI+ RTGIRNRRV+SGK+SL GLAVEAA++AL+MAEV PED+DLVLMCTSTP+DLFG A QI KALGC  NPLAYDITAACSGF+LGLVSAACHIRGGGF+NVLVIG D+LSRF DWTDRG+CILFGDAA
Sbjct:    1 MANASGFFTHPSIPNLRSRIHVPVRVSGSGFCVSNRFSKRVLCSSVSSVDKDASSSPSQYQRPRLVPSGCKLIGCGSAVPSLLISNDDLAKIVDTNDEWIATRTGIRNRRVVSGKDSLVGLAVEAATKALEMAEVVPEDIDLVLMCTSTPDDLFGAAPQIQKALGCTKNPLAYDITAACSGFVLGLVSAACHIRGGGFKNVLVIGADSLSRFVDWTDRGTCILFGDAA 228          
BLAST of CK936359 vs. ExPASy Swiss-Prot
Match: FABH1_CUPWR (3-oxoacyl-[acyl-carrier-protein] synthase 3 A, chloroplastic OS=Cuphea wrightii GN=KAS3A PE=2 SV=2)

HSP 1 Score: 311.227 bits (796), Expect = 4.532e-84
Identity = 156/226 (69.03%), Postives = 181/226 (80.09%), Query Frame = 1
Query:  163 MASASGLFTPSVPSLRRRVQPSTWKYRSGFCFSQGTFRRVLCSSTIAGXXXXXXXXXXRAPRLINRGCKLVGCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLFGGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGDAA 840
            MA+ASG    SVP+LRR  QP      S    S   F+RV C S + G          R+PRL++RGCKL+G GSA+P+LQISNDDLAKIVDT+DEWISVRTGIRNRRVL+GK+SLT LA EAA +AL+MA+++ +DVD+VLMCTSTPEDLFG A QI KALGCK NPL+YDITAACSGF+LGLVSAACHIRGGGF NVLVIG D+LSR+ DWTDRG+CILFGDAA
Sbjct:    1 MANASGFLGSSVPALRRATQPQHSISSSRGSSSDFVFKRVFCCSAVQGSDRQSLGDS-RSPRLVSRGCKLIGSGSAIPSLQISNDDLAKIVDTNDEWISVRTGIRNRRVLTGKDSLTNLASEAARKALEMAQIDADDVDMVLMCTSTPEDLFGSAPQISKALGCKKNPLSYDITAACSGFVLGLVSAACHIRGGGFNNVLVIGADSLSRYVDWTDRGTCILFGDAA 225          
BLAST of CK936359 vs. ExPASy Swiss-Prot
Match: FABH_SPIOL (3-oxoacyl-[acyl-carrier-protein] synthase III, chloroplastic OS=Spinacia oleracea PE=1 SV=1)

HSP 1 Score: 308.916 bits (790), Expect = 2.249e-83
Identity = 155/230 (67.39%), Postives = 176/230 (76.52%), Query Frame = 1
Query:  163 MASASGLFTPSVPS-LRRRVQPSTWKYRSGFCFSQGTFRRVLCSSTIAGXXXXXXXXXX---RAPRLINRGCKLVGCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLFGGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGDAA 840
            MA++ G F+PSVPS L  ++ PS     SGFC   G  +RV CSS  A              R  RL+NRGCKLVGCGSAVP LQISNDDL+K V+TSDEWI+ RTGIR R VLSGK+SL  LA EAA  ALQMA VNP+D+DL+LMCTSTPEDLFG A Q+ +ALGC   PL+YDITAACSGF+LGLVSAACH+RGGGF+NVLVIG DALSRF DWTDRG+CILFGDAA
Sbjct:    1 MATSYGFFSPSVPSSLNNKISPSLGINGSGFCSHLGISKRVFCSSIEASEKHAAAGVSSSESRVSRLVNRGCKLVGCGSAVPKLQISNDDLSKFVETSDEWIATRTGIRQRHVLSGKDSLVDLAAEAARNALQMANVNPDDIDLILMCTSTPEDLFGSAPQVQRALGCSRTPLSYDITAACSGFMLGLVSAACHVRGGGFKNVLVIGADALSRFVDWTDRGTCILFGDAA 230          
BLAST of CK936359 vs. ExPASy Swiss-Prot
Match: FABH2_CUPWR (3-oxoacyl-[acyl-carrier-protein] synthase 3 B, chloroplastic OS=Cuphea wrightii GN=KAS3B PE=2 SV=1)

HSP 1 Score: 303.138 bits (775), Expect = 1.234e-81
Identity = 153/229 (66.81%), Postives = 178/229 (77.73%), Query Frame = 1
Query:  163 MASASGLFTPSVPSLRRRVQPSTWKYRSGFCFSQGTFRRVLCSSTIAGXXXXXXXXXX---RAPRLINRGCKLVGCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLFGGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGDAA 840
            MA+A G    SVP+++R  Q    +  SGFC +    +RV C S + G             R PRL++RGCKLVG GSA+P LQ+SNDDL+KIVDT+DEWISVRTGIRNRRVL+GKESLT LA  AA +AL+MA+V+  DVD+VLMCTSTPEDLFG A QI KALGCK NPLAYDITAACSGF+LGLVSAACHIRGGGF N+LVIG D+LSR+ DWTDRG+CILFGDAA
Sbjct:    1 MANAYGFVGHSVPTMKRAAQFQ--QMGSGFCSADSISKRVFCCSVVQGADKPASGDSRTEYRTPRLVSRGCKLVGSGSAMPALQVSNDDLSKIVDTNDEWISVRTGIRNRRVLTGKESLTNLATVAARKALEMAQVDANDVDMVLMCTSTPEDLFGSAPQIQKALGCKKNPLAYDITAACSGFVLGLVSAACHIRGGGFNNILVIGADSLSRYVDWTDRGTCILFGDAA 227          
BLAST of CK936359 vs. ExPASy Swiss-Prot
Match: FABH_MICAN (3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Microcystis aeruginosa (strain NIES-843) GN=fabH PE=3 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 4.899e-46
Identity = 88/157 (56.05%), Postives = 117/157 (74.52%), Query Frame = 1
Query:  370 LVGCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLFGGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGDAA 840
            + GCGSA P   +SN++L++IV+TSDEWI  RTGI  R +     SL+ LA +AA +AL+MA+V+P D+DL+L+ TSTP+DLFG A Q+   +G  N  +A+D+TAACSGFL+GLV+A   IR G +RNVLVIG D LSR+ DW DR +C+LFGD A
Sbjct:   10 ITGCGSATPAQFLSNEELSQIVETSDEWIKSRTGIGKRHLADRSVSLSQLAAQAAIKALEMAQVSPRDIDLILLATSTPDDLFGSAAQVQSQIGA-NRAIAFDLTAACSGFLVGLVTATQFIRTGTYRNVLVIGADVLSRWVDWNDRATCVLFGDGA 165          
BLAST of CK936359 vs. ExPASy Swiss-Prot
Match: FABH_PROMM (3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Prochlorococcus marinus (strain MIT 9313) GN=fabH PE=3 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 7.074e-45
Identity = 92/163 (56.44%), Postives = 114/163 (69.94%), Query Frame = 1
Query:  352 INRGCKLVGCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLFGGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGDAA 840
            I  G  LVGCGSA P+ +ISND L + VDTSD WI  RTGI  RRV+   E+LTGL+ +AA+ AL MA   PE VDL+++ TSTP+DLFG A Q+   LG +   +A+D+TAACSGFL  L++AA  +R G  R  LVIG D LSR+ DW DR SC+LFGD A
Sbjct:    7 IGSGVALVGCGSATPSQRISNDQLGQRVDTSDAWIRSRTGISARRVIGPDETLTGLSHQAAANALTMAGWEPESVDLIILATSTPDDLFGSAPQLQAILGAR-QAVAFDLTAACSGFLFALITAAQFLRTGAMRRALVIGADQLSRWVDWDDRRSCVLFGDGA 168          
BLAST of CK936359 vs. ExPASy Swiss-Prot
Match: FABH_ACAM1 (3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Acaryochloris marina (strain MBIC 11017) GN=fabH PE=3 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 1.207e-44
Identity = 87/160 (54.37%), Postives = 116/160 (72.50%), Query Frame = 1
Query:  361 GCKLVGCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLFGGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGDAA 840
            G  + GCGSA P   + N  L++IVDTSDEWI+ RTGIR+R +    ++L  L   AA  AL+MA+V   D+DL+L+ TSTP+DLFG A QI  A+G K + +A+D+TAACSGF+ G+++AA  IR G +RNVL++G D LSR+ DWTDR SC+LFGD A
Sbjct:    7 GLAVTGCGSAAPETSLDNHGLSQIVDTSDEWIASRTGIRSRHLAGPDDTLAKLGAIAAQNALEMAQVEATDLDLILLATSTPDDLFGSACQIQAAIGAK-HAVAFDLTAACSGFVFGMITAAQFIRTGVYRNVLLVGADVLSRWVDWTDRRSCVLFGDGA 165          
BLAST of CK936359 vs. ExPASy Swiss-Prot
Match: FABH_ANASP (3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Anabaena sp. (strain PCC 7120) GN=fabH PE=3 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 1.334e-43
Identity = 87/162 (53.70%), Postives = 117/162 (72.22%), Query Frame = 1
Query:  355 NRGCKLVGCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLFGGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGDAA 840
            N G  + G GSAVP   + N++L+++V+TSDEWIS RTGIR RR+    ESL+ LA  A+ +A+  A +   D+DL+L+ TSTP+DLFG AT+I   LG  N  +A+D+TAACSGF+ GLV+AA  IR G ++NVL+IG D LSR+ DW DR +C+LFGD A
Sbjct:    3 NLGIAITGSGSAVPETSLHNEELSQLVETSDEWISTRTGIRQRRLALPTESLSSLAAAASRQAIASAGITASDIDLILLATSTPDDLFGTATKIQAELGA-NKAVAFDLTAACSGFVFGLVTAAQFIRTGVYQNVLLIGADILSRWVDWQDRRTCVLFGDGA 163          
BLAST of CK936359 vs. ExPASy Swiss-Prot
Match: FABH_SYNY3 (3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Synechocystis sp. (strain PCC 6803) GN=fabH PE=3 SV=2)

HSP 1 Score: 174.866 bits (442), Expect = 5.069e-43
Identity = 83/163 (50.92%), Postives = 116/163 (71.17%), Query Frame = 1
Query:  352 INRGCKLVGCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLFGGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGDAA 840
            +  G K++G G+A+    ++N DL+ IV+TSDEWI  RTG+R R + S +E+L  L V+A  +AL MA + PED+DL+++ TSTP+DLFG A QI   LG      A+DITAACSGF++GL  AA  +R G ++ VL++GGD LSR+ DW+DR +C+LFGD A
Sbjct:    4 LGSGLKIIGSGTAIADQSLTNQDLSNIVETSDEWIQSRTGMRQRYICSAQENLASLGVKAGQKALAMAGLQPEDLDLIILATSTPDDLFGTAAQIQGGLGA-TRAFAFDITAACSGFVVGLNVAAQFLRTGVYQRVLIVGGDVLSRWVDWSDRTTCVLFGDGA 165          
BLAST of CK936359 vs. ExPASy Swiss-Prot
Match: FABH_ANAVT (3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=fabH PE=3 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 1.926e-42
Identity = 85/162 (52.47%), Postives = 115/162 (70.99%), Query Frame = 1
Query:  355 NRGCKLVGCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLFGGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGDAA 840
            N G  + G GSA P   + N++L+++V+TSDEWIS RTGIR RR+    ESL+ LA  A+ +A+  A +   D+DL+L+ TSTP+DLFG AT+I   LG     +A+D+TAACSGF+ GLV+AA  IR G ++NVL+IG D LSR+ DW DR +C+LFGD A
Sbjct:    3 NLGIAITGSGSAAPETSLHNEELSQLVETSDEWISTRTGIRQRRLALPTESLSSLAAAASRQAIASAGITASDIDLILLATSTPDDLFGTATKIQAELGA-TKAVAFDLTAACSGFVFGLVTAAQFIRTGVYQNVLLIGADILSRWVDWQDRRTCVLFGDGA 163          
The following BLAST results are available for this feature:
BLAST of CK936359 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 415
Match NameE-valueIdentityDescription
FABH_ARATH4.842e-8670.613-oxoacyl-[acyl-carrier-protein] synthase III, chl... [more]
FABH1_CUPWR4.532e-8469.033-oxoacyl-[acyl-carrier-protein] synthase 3 A, chl... [more]
FABH_SPIOL2.249e-8367.393-oxoacyl-[acyl-carrier-protein] synthase III, chl... [more]
FABH2_CUPWR1.234e-8166.813-oxoacyl-[acyl-carrier-protein] synthase 3 B, chl... [more]
FABH_MICAN4.899e-4656.053-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Mic... [more]
FABH_PROMM7.074e-4556.443-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Pro... [more]
FABH_ACAM11.207e-4454.383-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Aca... [more]
FABH_ANASP1.334e-4353.703-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Ana... [more]
FABH_SYNY35.069e-4350.923-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Syn... [more]
FABH_ANAVT1.926e-4252.473-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Ana... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004383_D04 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0003_IF_D04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK936359 ID=CK936359; Name=CK936359; organism=Citrus sinensis; type=EST; length=842bp
GGGGGTTTTTTCTTGTCATGGTTGTATTCACTCTTTTGAATACATTCTTG
TTCTTTCAAATATAAGCTGAAAAAGATCCTTTTTTTTTGTTGCTTCACTC
GTTTTCCTCTAAATATTCCGAACTTTAATTGGTGTATGTGCGAGTTATAT
AGAGAGTGAAAAATGGCAAGTGCATCTGGGCTGTTTACACCTTCAGTTCC
AAGCCTGAGGAGGAGGGTTCAGCCTTCAACATGGAAATATCGATCTGGGT
TTTGCTTCTCTCAGGGAACCTTTAGGAGGGTACTGTGCTCCAGCACCATT
GCTGGTTCTGAGAAGAGTGTGTCTTCTTCCGAATCTAGAGCACCCAGACT
CATCAATAGAGGGTGCAAGTTGGTTGGATGTGGCTCAGCAGTGCCAACTC
TTCAGATTTCCAATGATGATCTCGCAAAAATAGTTGACACTTCTGATGAA
TGGATCTCTGTTCGAACTGGGATTCGAAATCGACGCGTTCTATCAGGCAA
AGAAAGCTTGACTGGTCTAGCTGTAGAGGCAGCAAGTAGAGCTCTTCAGA
TGGCAGAGGTGAACCCTGAAGATGTTGACCTTGTGTTGATGTGCACATCT
ACTCCAGAGGATCTTTTCGGTGGTGCTACTCAGATTCCAAAGGCACTTGG
CTGCAAAAACAATCCTTTAGCTTACGATATTACAGCTGCATGTAGTGGAT
TTCTTTTGGGTCTTGTCTCAGCCGCTTGTCATATTAGGGGAGGCGGGTTT
CGCAATGTTCTAGTGATTGGGGGTGATGCTCTTTCTCGATTTACTGATTG
GACGGATAGAGGATCCTGCATTCTGTTTGGGGATGCTGCGGG
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