CN186678
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN186678 vs. ExPASy Swiss-Prot
Match: CO040_MOUSE (UPF0235 protein C15orf40 homolog OS=Mus musculus PE=2 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.958e-16 Identity = 44/88 (50.00%), Postives = 59/88 (67.05%), Query Frame = 1 Query: 310 PPSSVSITIHAKPGSKSCSITDVSDEAVGVQIDAPAKDGEANAALLEYMSSVLGVKRRQVSIGSGSKSRDKIV-IVEEITPENVLNSL 570 P V+I IHAKPGS+ ++TD+S EAVGV I AP +GEANA L Y+S VL +++ V + G KSR+K+V ++ TPE VL L Sbjct: 32 PKGFVTIAIHAKPGSRQNAVTDLSTEAVGVAIAAPPSEGEANAELCRYLSKVLDLRKSDVVLDKGGKSREKVVKLLASTTPEEVLEKL 119
BLAST of CN186678 vs. ExPASy Swiss-Prot
Match: CO040_RAT (UPF0235 protein C15orf40 homolog OS=Rattus norvegicus PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 8.607e-16 Identity = 43/84 (51.19%), Postives = 58/84 (69.05%), Query Frame = 1 Query: 322 VSITIHAKPGSKSCSITDVSDEAVGVQIDAPAKDGEANAALLEYMSSVLGVKRRQVSIGSGSKSRDKIV-IVEEITPENVLNSL 570 V+I IHAKPGSK ++TD++ EAVGV I AP +GEANA L Y+S VL +++ V + G KSR+K+V ++ TPE VL L Sbjct: 36 VTIAIHAKPGSKQNAVTDLNTEAVGVAIAAPPSEGEANAELCRYLSKVLDLRKSDVVLDKGGKSREKVVKLLASTTPEEVLEKL 119
BLAST of CN186678 vs. ExPASy Swiss-Prot
Match: CO040_BOVIN (UPF0235 protein C15orf40 homolog OS=Bos taurus PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 8.607e-16 Identity = 44/90 (48.89%), Postives = 58/90 (64.44%), Query Frame = 1 Query: 310 PPSSVSITIHAKPGSKSCSITDVSDEAVGVQIDAPAKDGEANAALLEYMSSVLGVKRRQVSIGSGSKSRDKIV-IVEEITPENVLNSLGK 576 P VSI IHAKPGSK ++TDV+ EAV V I AP +GEANA L Y+S VL +++ V + G KSR+K+V ++ PE +L L K Sbjct: 32 PKGGVSIAIHAKPGSKQNAVTDVTTEAVSVAIAAPPTEGEANAELCRYLSKVLELRKSDVVLDKGGKSREKVVKLLASTPPEEILEKLKK 121
BLAST of CN186678 vs. ExPASy Swiss-Prot
Match: CO040_HUMAN (UPF0235 protein C15orf40 OS=Homo sapiens GN=C15orf40 PE=1 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 1.124e-15 Identity = 43/90 (47.78%), Postives = 59/90 (65.56%), Query Frame = 1 Query: 310 PPSSVSITIHAKPGSKSCSITDVSDEAVGVQIDAPAKDGEANAALLEYMSSVLGVKRRQVSIGSGSKSRDKIV-IVEEITPENVLNSLGK 576 P V+I IHAKPGSK ++TD++ EAV V I AP +GEANA L Y+S VL +++ V + G KSR+K+V ++ TPE +L L K Sbjct: 32 PKGCVTIAIHAKPGSKQNAVTDLTAEAVNVAIAAPPSEGEANAELCRYLSKVLELRKSDVVLDKGGKSREKVVKLLASTTPEEILEKLKK 121 The following BLAST results are available for this feature:
BLAST of CN186678 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN186678 ID=CN186678; Name=CN186678; organism=Citrus sinensis; type=EST; length=815bpback to top |