CK936281
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK936281 vs. ExPASy Swiss-Prot
Match: IF4A1_ORYSJ (Eukaryotic initiation factor 4A-1 OS=Oryza sativa subsp. japonica GN=Os06g0701100 PE=2 SV=2) HSP 1 Score: 80.8777 bits (198), Expect = 2.838e-15 Identity = 39/40 (97.50%), Postives = 40/40 (100.00%), Query Frame = 1 Query: 4 GRKGVAINFVTRDDERMLFDIQKFYNVVIEELPANVADLL 123 GRKGVAINFVTRDDERMLFDIQ+FYNVVIEELPANVADLL Sbjct: 375 GRKGVAINFVTRDDERMLFDIQRFYNVVIEELPANVADLL 414
BLAST of CK936281 vs. ExPASy Swiss-Prot
Match: IF414_TOBAC (Eukaryotic initiation factor 4A-14 OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 2.838e-15 Identity = 39/40 (97.50%), Postives = 40/40 (100.00%), Query Frame = 1 Query: 4 GRKGVAINFVTRDDERMLFDIQKFYNVVIEELPANVADLL 123 GRKGVAINFVT+DDERMLFDIQKFYNVVIEELPANVADLL Sbjct: 374 GRKGVAINFVTKDDERMLFDIQKFYNVVIEELPANVADLL 413
BLAST of CK936281 vs. ExPASy Swiss-Prot
Match: IF4A_WHEAT (Eukaryotic initiation factor 4A OS=Triticum aestivum PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 3.706e-15 Identity = 39/40 (97.50%), Postives = 40/40 (100.00%), Query Frame = 1 Query: 4 GRKGVAINFVTRDDERMLFDIQKFYNVVIEELPANVADLL 123 GRKGVAINFVTR+DERMLFDIQKFYNVVIEELPANVADLL Sbjct: 375 GRKGVAINFVTREDERMLFDIQKFYNVVIEELPANVADLL 414
BLAST of CK936281 vs. ExPASy Swiss-Prot
Match: IF4A1_ARATH (Eukaryotic initiation factor 4A-1 OS=Arabidopsis thaliana GN=TIF4A-1 PE=1 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 3.706e-15 Identity = 38/40 (95.00%), Postives = 40/40 (100.00%), Query Frame = 1 Query: 4 GRKGVAINFVTRDDERMLFDIQKFYNVVIEELPANVADLL 123 GRKGVAINFVTRDDERMLFDIQKFYNVV+EELP+NVADLL Sbjct: 373 GRKGVAINFVTRDDERMLFDIQKFYNVVVEELPSNVADLL 412
BLAST of CK936281 vs. ExPASy Swiss-Prot
Match: IF411_TOBAC (Eukaryotic initiation factor 4A-11 OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 6.322e-15 Identity = 38/40 (95.00%), Postives = 40/40 (100.00%), Query Frame = 1 Query: 4 GRKGVAINFVTRDDERMLFDIQKFYNVVIEELPANVADLL 123 GRKGV+INFVT+DDERMLFDIQKFYNVVIEELPANVADLL Sbjct: 374 GRKGVSINFVTKDDERMLFDIQKFYNVVIEELPANVADLL 413
BLAST of CK936281 vs. ExPASy Swiss-Prot
Match: IF4A3_ORYSJ (Eukaryotic initiation factor 4A-3 OS=Oryza sativa subsp. japonica GN=Os02g0146600 PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 8.257e-15 Identity = 38/40 (95.00%), Postives = 39/40 (97.50%), Query Frame = 1 Query: 4 GRKGVAINFVTRDDERMLFDIQKFYNVVIEELPANVADLL 123 GRKGVAINFVTRDDERMLFDIQ+FYNV IEELPANVADLL Sbjct: 375 GRKGVAINFVTRDDERMLFDIQRFYNVTIEELPANVADLL 414
BLAST of CK936281 vs. ExPASy Swiss-Prot
Match: IF4A8_TOBAC (Eukaryotic initiation factor 4A-8 OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 1.839e-14 Identity = 37/40 (92.50%), Postives = 39/40 (97.50%), Query Frame = 1 Query: 4 GRKGVAINFVTRDDERMLFDIQKFYNVVIEELPANVADLL 123 GRKGVAINFVT DDERMLFDIQKFYNV+IEELP+NVADLL Sbjct: 374 GRKGVAINFVTTDDERMLFDIQKFYNVIIEELPSNVADLL 413
BLAST of CK936281 vs. ExPASy Swiss-Prot
Match: IF4A6_TOBAC (Eukaryotic initiation factor 4A-6 (Fragment) OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 1.839e-14 Identity = 37/39 (94.87%), Postives = 39/39 (100.00%), Query Frame = 1 Query: 4 GRKGVAINFVTRDDERMLFDIQKFYNVVIEELPANVADL 120 GRKGV+INFVT+DDERMLFDIQKFYNVVIEELPANVADL Sbjct: 215 GRKGVSINFVTKDDERMLFDIQKFYNVVIEELPANVADL 253
BLAST of CK936281 vs. ExPASy Swiss-Prot
Match: IF4A2_NICPL (Eukaryotic initiation factor 4A-2 OS=Nicotiana plumbaginifolia PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 2.402e-14 Identity = 38/40 (95.00%), Postives = 39/40 (97.50%), Query Frame = 1 Query: 4 GRKGVAINFVTRDDERMLFDIQKFYNVVIEELPANVADLL 123 GRKGVAIN VT+DDERMLFDIQKFYNVVIEELPANVADLL Sbjct: 374 GRKGVAINSVTKDDERMLFDIQKFYNVVIEELPANVADLL 413
BLAST of CK936281 vs. ExPASy Swiss-Prot
Match: IF410_TOBAC (Eukaryotic initiation factor 4A-10 OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 2.402e-14 Identity = 38/40 (95.00%), Postives = 39/40 (97.50%), Query Frame = 1 Query: 4 GRKGVAINFVTRDDERMLFDIQKFYNVVIEELPANVADLL 123 GRKGVAINFVT+DDERML DIQKFYNVVIEELPANVADLL Sbjct: 374 GRKGVAINFVTKDDERMLSDIQKFYNVVIEELPANVADLL 413 The following BLAST results are available for this feature:
BLAST of CK936281 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 16
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Sequences
The
following sequences are available for this feature:
EST sequence >CK936281 ID=CK936281; Name=CK936281; organism=Citrus sinensis; type=EST; length=456bpback to top |