CX675091
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX675091 vs. ExPASy Swiss-Prot
Match: RL38_ARATH (60S ribosomal protein L38 OS=Arabidopsis thaliana GN=RPL38A PE=2 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 4.327e-31 Identity = 64/69 (92.75%), Postives = 68/69 (98.55%), Query Frame = 3 Query: 69 MPKQIHEIKDFLLTARRKDARSVKIKRSRDVVKFKVRCSKYLYTLCVFDSKKADKLKQSLPPGLSVQDL 275 MPKQIHEIKDFLLTARRKDARSVKIKRS+D+VKFKVRCS+YLYTLCVFD +KADKLKQSLPPGLSVQDL Sbjct: 1 MPKQIHEIKDFLLTARRKDARSVKIKRSKDIVKFKVRCSRYLYTLCVFDQEKADKLKQSLPPGLSVQDL 69
BLAST of CX675091 vs. ExPASy Swiss-Prot
Match: RL38_SOLLC (60S ribosomal protein L38 OS=Solanum lycopersicum GN=RPL38 PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 5.290e-29 Identity = 61/69 (88.41%), Postives = 67/69 (97.10%), Query Frame = 3 Query: 69 MPKQIHEIKDFLLTARRKDARSVKIKRSRDVVKFKVRCSKYLYTLCVFDSKKADKLKQSLPPGLSVQDL 275 MPKQIHEIKDFLLTARRKDAR+VKIK+++D+VKFKVRCSKYLYTLCV D +KADKLKQSLPPGLSVQDL Sbjct: 1 MPKQIHEIKDFLLTARRKDARTVKIKKNKDMVKFKVRCSKYLYTLCVSDFEKADKLKQSLPPGLSVQDL 69
BLAST of CX675091 vs. ExPASy Swiss-Prot
Match: RL38_BRABE (60S ribosomal protein L38 OS=Branchiostoma belcheri GN=RPL38 PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 7.149e-26 Identity = 55/69 (79.71%), Postives = 65/69 (94.20%), Query Frame = 3 Query: 69 MPKQIHEIKDFLLTARRKDARSVKIKRSRDVVKFKVRCSKYLYTLCVFDSKKADKLKQSLPPGLSVQDL 275 MPKQIHEIKDFLLTARRKDA+SVKIK+++D VKFKVRCS+YLYTL + D +KADKLKQSLPPGL+V++L Sbjct: 1 MPKQIHEIKDFLLTARRKDAKSVKIKKNKDNVKFKVRCSRYLYTLVITDKEKADKLKQSLPPGLAVKEL 69
BLAST of CX675091 vs. ExPASy Swiss-Prot
Match: RL38_MOUSE (60S ribosomal protein L38 OS=Mus musculus GN=Rpl38 PE=2 SV=3) HSP 1 Score: 110.538 bits (275), Expect = 3.923e-24 Identity = 52/69 (75.36%), Postives = 64/69 (92.75%), Query Frame = 3 Query: 69 MPKQIHEIKDFLLTARRKDARSVKIKRSRDVVKFKVRCSKYLYTLCVFDSKKADKLKQSLPPGLSVQDL 275 MP++I EIKDFLLTARRKDA+SVKIK+++D VKFKVRCS+YLYTL + D +KA+KLKQSLPPGL+V+DL Sbjct: 1 MPRKIEEIKDFLLTARRKDAKSVKIKKNKDNVKFKVRCSRYLYTLVITDKEKAEKLKQSLPPGLAVKDL 69
BLAST of CX675091 vs. ExPASy Swiss-Prot
Match: RL38_RAT (60S ribosomal protein L38 OS=Rattus norvegicus GN=Rpl38 PE=1 SV=2) HSP 1 Score: 108.997 bits (271), Expect = 1.141e-23 Identity = 51/69 (73.91%), Postives = 64/69 (92.75%), Query Frame = 3 Query: 69 MPKQIHEIKDFLLTARRKDARSVKIKRSRDVVKFKVRCSKYLYTLCVFDSKKADKLKQSLPPGLSVQDL 275 MP++I EIKDFLLTARRKDA+SVKIK+++D VKFKVRCS+YLYTL + D +KA+KLKQSLPPGL+V++L Sbjct: 1 MPRKIEEIKDFLLTARRKDAKSVKIKKNKDNVKFKVRCSRYLYTLVITDKEKAEKLKQSLPPGLAVKEL 69
BLAST of CX675091 vs. ExPASy Swiss-Prot
Match: RL38_HUMAN (60S ribosomal protein L38 OS=Homo sapiens GN=RPL38 PE=1 SV=2) HSP 1 Score: 108.997 bits (271), Expect = 1.141e-23 Identity = 51/69 (73.91%), Postives = 64/69 (92.75%), Query Frame = 3 Query: 69 MPKQIHEIKDFLLTARRKDARSVKIKRSRDVVKFKVRCSKYLYTLCVFDSKKADKLKQSLPPGLSVQDL 275 MP++I EIKDFLLTARRKDA+SVKIK+++D VKFKVRCS+YLYTL + D +KA+KLKQSLPPGL+V++L Sbjct: 1 MPRKIEEIKDFLLTARRKDAKSVKIKKNKDNVKFKVRCSRYLYTLVITDKEKAEKLKQSLPPGLAVKEL 69
BLAST of CX675091 vs. ExPASy Swiss-Prot
Match: RL38_BOVIN (60S ribosomal protein L38 OS=Bos taurus GN=RPL38 PE=3 SV=4) HSP 1 Score: 108.997 bits (271), Expect = 1.141e-23 Identity = 51/69 (73.91%), Postives = 64/69 (92.75%), Query Frame = 3 Query: 69 MPKQIHEIKDFLLTARRKDARSVKIKRSRDVVKFKVRCSKYLYTLCVFDSKKADKLKQSLPPGLSVQDL 275 MP++I EIKDFLLTARRKDA+SVKIK+++D VKFKVRCS+YLYTL + D +KA+KLKQSLPPGL+V++L Sbjct: 1 MPRKIEEIKDFLLTARRKDAKSVKIKKNKDNVKFKVRCSRYLYTLVITDKEKAEKLKQSLPPGLAVKEL 69
BLAST of CX675091 vs. ExPASy Swiss-Prot
Match: RL38_MACFA (60S ribosomal protein L38 OS=Macaca fascicularis GN=RPL38 PE=3 SV=3) HSP 1 Score: 107.457 bits (267), Expect = 3.321e-23 Identity = 50/68 (73.53%), Postives = 63/68 (92.65%), Query Frame = 3 Query: 69 MPKQIHEIKDFLLTARRKDARSVKIKRSRDVVKFKVRCSKYLYTLCVFDSKKADKLKQSLPPGLSVQD 272 MP++I EIKDFLLTARRKDA+SVKIK+++D VKFKVRCS+YLYTL + D +KA+KLKQSLPPGL+V++ Sbjct: 1 MPRKIEEIKDFLLTARRKDAKSVKIKKNKDNVKFKVRCSRYLYTLVITDKEKAEKLKQSLPPGLAVKE 68
BLAST of CX675091 vs. ExPASy Swiss-Prot
Match: RL38_ORNPR (60S ribosomal protein L38 OS=Ornithodoros parkeri GN=RpL38 PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 8.180e-22 Identity = 51/70 (72.86%), Postives = 62/70 (88.57%), Query Frame = 3 Query: 69 MPKQIHEIKDFLLTARRKDARSVKIKRSRD-VVKFKVRCSKYLYTLCVFDSKKADKLKQSLPPGLSVQDL 275 MPKQ+ EIKDFLLTARRKDA+SV+IK++ D V KFKVRCSKYLYT+ V + +KA+KLKQSLPPGL V++L Sbjct: 1 MPKQLKEIKDFLLTARRKDAKSVRIKKNPDNVTKFKVRCSKYLYTIVVKEKEKAEKLKQSLPPGLQVKEL 70
BLAST of CX675091 vs. ExPASy Swiss-Prot
Match: RL38_IXOSC (60S ribosomal protein L38 OS=Ixodes scapularis GN=RpL38 PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 8.180e-22 Identity = 51/70 (72.86%), Postives = 62/70 (88.57%), Query Frame = 3 Query: 69 MPKQIHEIKDFLLTARRKDARSVKIKRSRD-VVKFKVRCSKYLYTLCVFDSKKADKLKQSLPPGLSVQDL 275 MPKQ+ EIK+FLLTARRKDA+SVKIK++ D V KFKVRCSKYLYT+ V + +KA+KLKQSLPPGL V++L Sbjct: 1 MPKQLKEIKEFLLTARRKDAKSVKIKKNPDNVTKFKVRCSKYLYTIVVTEKEKAEKLKQSLPPGLQVKEL 70 The following BLAST results are available for this feature:
BLAST of CX675091 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 30
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Sequences
The
following sequences are available for this feature:
EST sequence >CX675091 ID=CX675091; Name=CX675091; organism=Citrus sinensis; type=EST; length=485bpback to top |