CN186652
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN186652 vs. ExPASy Swiss-Prot
Match: RL7A_ORYSJ (60S ribosomal protein L7a OS=Oryza sativa subsp. japonica GN=RPL7A PE=2 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 2.219e-31 Identity = 67/94 (71.28%), Postives = 73/94 (77.66%), Query Frame = 2 Query: 371 MAPKRGGKVAAAPAKNKPEKVVNPLFEKRPKQFGIGGALPPKKDLHRYVKWPKAXXXXXXXXXXXXXXKVPPALNQFTKTLDKNLASSLFKLLL 652 MAPKRGG+ A PAK K EKV NPLFEKRPKQFGIGGALPPKKDLHR+VKWPK KVPPALNQFT+TLDKNLA++LFK+LL Sbjct: 1 MAPKRGGR-APVPAKKKTEKVTNPLFEKRPKQFGIGGALPPKKDLHRFVKWPKVVRIQRQRRILKQRLKVPPALNQFTRTLDKNLATNLFKMLL 93
BLAST of CN186652 vs. ExPASy Swiss-Prot
Match: RL7A2_ARATH (60S ribosomal protein L7a-2 OS=Arabidopsis thaliana GN=RPL7AB PE=2 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 3.204e-30 Identity = 66/94 (70.21%), Postives = 73/94 (77.66%), Query Frame = 2 Query: 371 MAPKRGGKVAAAPAKNKPEKVVNPLFEKRPKQFGIGGALPPKKDLHRYVKWPKAXXXXXXXXXXXXXXKVPPALNQFTKTLDKNLASSLFKLLL 652 MAPK+G KVA+ K KPEKV NPLFE+RPKQFGIGGALPPKKDL RY+KWPK+ KVPPALNQFTKTLDKNLA+SLFK+LL Sbjct: 1 MAPKKGVKVAS---KKKPEKVTNPLFERRPKQFGIGGALPPKKDLSRYIKWPKSIRLQRQKRILKQRLKVPPALNQFTKTLDKNLATSLFKILL 91
BLAST of CN186652 vs. ExPASy Swiss-Prot
Match: RL7A1_ARATH (60S ribosomal protein L7a-1 OS=Arabidopsis thaliana GN=RPL7AA PE=2 SV=2) HSP 1 Score: 126.331 bits (316), Expect = 1.346e-28 Identity = 65/94 (69.15%), Postives = 71/94 (75.53%), Query Frame = 2 Query: 371 MAPKRGGKVAAAPAKNKPEKVVNPLFEKRPKQFGIGGALPPKKDLHRYVKWPKAXXXXXXXXXXXXXXKVPPALNQFTKTLDKNLASSLFKLLL 652 MAPK+G KVAA K EKV NPLFE+RPKQFGIGGALPPKKDL RY+KWPK+ KVPPALNQFTKTLDKNLA+SLFK+LL Sbjct: 1 MAPKKGVKVAAK--KKTAEKVSNPLFERRPKQFGIGGALPPKKDLSRYIKWPKSIRLQRQKRILKQRLKVPPALNQFTKTLDKNLATSLFKVLL 92
BLAST of CN186652 vs. ExPASy Swiss-Prot
Match: MSRA_SOLLC (Peptide methionine sulfoxide reductase (Fragment) OS=Solanum lycopersicum GN=E4 PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 3.464e-24 Identity = 53/66 (80.30%), Postives = 60/66 (90.91%), Query Frame = -1 Query: 142 SRLARESMEAKQLEMKDQRKIVTEILPAKRFYRAEEYHQQYLEKGGGRGSKQSAEKGCDEPVRCYG 339 ++LARES+EAKQ E D +KIVTEILPAKRFYRAEEYHQQYLEKGGGRG KQSA KGC++P+RCYG Sbjct: 132 AQLARESLEAKQKEFMD-KKIVTEILPAKRFYRAEEYHQQYLEKGGGRGCKQSAAKGCNDPIRCYG 196
BLAST of CN186652 vs. ExPASy Swiss-Prot
Match: MSRA_FRAAN (Peptide methionine sulfoxide reductase OS=Fragaria ananassa PE=2 SV=2) HSP 1 Score: 107.457 bits (267), Expect = 6.533e-23 Identity = 49/64 (76.56%), Postives = 59/64 (92.19%), Query Frame = -1 Query: 142 LARESMEAKQLEMKDQRKIVTEILPAKRFYRAEEYHQQYLEKGGGRGSKQSAEKGCDEPVRCYG 333 LA++S EAKQ E KD+R +VTEILPAKRFYRAEEYHQQYLEKGGG G+KQSA+KGC++P++CYG Sbjct: 129 LAKKSKEAKQKEFKDKR-VVTEILPAKRFYRAEEYHQQYLEKGGGNGNKQSAQKGCNDPIKCYG 191
BLAST of CN186652 vs. ExPASy Swiss-Prot
Match: RL7A_TAKRU (60S ribosomal protein L7a OS=Takifugu rubripes GN=rpl7a PE=3 SV=3) HSP 1 Score: 95.1301 bits (235), Expect = 3.324e-19 Identity = 48/91 (52.75%), Postives = 61/91 (67.03%), Query Frame = 2 Query: 383 RGGKVAAAPA---KNKPEKVVNPLFEKRPKQFGIGGALPPKKDLHRYVKWPKAXXXXXXXXXXXXXXKVPPALNQFTKTLDKNLASSLFKL 646 +G KVA AP+ K++ +KVVNPLFEKRPK FGIG + PK+DL R+VKWP+ KVPPA+NQFT+ LD+ A+ LFKL Sbjct: 8 KGKKVAPAPSVAKKHEAKKVVNPLFEKRPKNFGIGQDIQPKRDLTRFVKWPRYIRLQRQRSILYKRLKVPPAINQFTQALDRQTATQLFKL 98
BLAST of CN186652 vs. ExPASy Swiss-Prot
Match: RL7A_RAT (60S ribosomal protein L7a OS=Rattus norvegicus GN=Rpl7a PE=1 SV=2) HSP 1 Score: 93.5893 bits (231), Expect = 9.670e-19 Identity = 48/91 (52.75%), Postives = 59/91 (64.84%), Query Frame = 2 Query: 383 RGGKVAAAPA---KNKPEKVVNPLFEKRPKQFGIGGALPPKKDLHRYVKWPKAXXXXXXXXXXXXXXKVPPALNQFTKTLDKNLASSLFKL 646 +G KVA APA K + +KVVNPLFEKRPK FGIG + PK+DL R+VKWP+ KVPPA+NQFT+ LD+ A+ L KL Sbjct: 8 KGKKVAPAPAVVKKQEAKKVVNPLFEKRPKNFGIGQDIQPKRDLTRFVKWPRYIRLQRQRAILYKRLKVPPAINQFTQALDRQTATQLLKL 98
BLAST of CN186652 vs. ExPASy Swiss-Prot
Match: RL7A_MOUSE (60S ribosomal protein L7a OS=Mus musculus GN=Rpl7a PE=2 SV=2) HSP 1 Score: 93.5893 bits (231), Expect = 9.670e-19 Identity = 48/91 (52.75%), Postives = 59/91 (64.84%), Query Frame = 2 Query: 383 RGGKVAAAPA---KNKPEKVVNPLFEKRPKQFGIGGALPPKKDLHRYVKWPKAXXXXXXXXXXXXXXKVPPALNQFTKTLDKNLASSLFKL 646 +G KVA APA K + +KVVNPLFEKRPK FGIG + PK+DL R+VKWP+ KVPPA+NQFT+ LD+ A+ L KL Sbjct: 8 KGKKVAPAPAVVKKQEAKKVVNPLFEKRPKNFGIGQDIQPKRDLTRFVKWPRYIRLQRQRAILYKRLKVPPAINQFTQALDRQTATQLLKL 98
BLAST of CN186652 vs. ExPASy Swiss-Prot
Match: RL7A_MACFA (60S ribosomal protein L7a OS=Macaca fascicularis GN=RPL7A PE=2 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 9.670e-19 Identity = 48/91 (52.75%), Postives = 59/91 (64.84%), Query Frame = 2 Query: 383 RGGKVAAAPA---KNKPEKVVNPLFEKRPKQFGIGGALPPKKDLHRYVKWPKAXXXXXXXXXXXXXXKVPPALNQFTKTLDKNLASSLFKL 646 +G KVA APA K + +KVVNPLFEKRPK FGIG + PK+DL R+VKWP+ KVPPA+NQFT+ LD+ A+ L KL Sbjct: 8 KGKKVAPAPAVVKKQEAKKVVNPLFEKRPKNFGIGQDIQPKRDLTRFVKWPRYIRLQRQRAILYKRLKVPPAINQFTQALDRQTATQLLKL 98
BLAST of CN186652 vs. ExPASy Swiss-Prot
Match: RL7A_HUMAN (60S ribosomal protein L7a OS=Homo sapiens GN=RPL7A PE=1 SV=2) HSP 1 Score: 93.5893 bits (231), Expect = 9.670e-19 Identity = 48/91 (52.75%), Postives = 59/91 (64.84%), Query Frame = 2 Query: 383 RGGKVAAAPA---KNKPEKVVNPLFEKRPKQFGIGGALPPKKDLHRYVKWPKAXXXXXXXXXXXXXXKVPPALNQFTKTLDKNLASSLFKL 646 +G KVA APA K + +KVVNPLFEKRPK FGIG + PK+DL R+VKWP+ KVPPA+NQFT+ LD+ A+ L KL Sbjct: 8 KGKKVAPAPAVVKKQEAKKVVNPLFEKRPKNFGIGQDIQPKRDLTRFVKWPRYIRLQRQRAILYKRLKVPPAINQFTQALDRQTATQLLKL 98 The following BLAST results are available for this feature:
BLAST of CN186652 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 22
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Sequences
The
following sequences are available for this feature:
EST sequence >CN186652 ID=CN186652; Name=CN186652; organism=Citrus sinensis; type=EST; length=654bpback to top |