EY665794

Overview
NameEY665794
Unique NameEY665794
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length865
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY665794_ssr43 microsatellite EY665794_ssr43:43..52. BLAST: Citrus ESTs to Prunus persica proteins V1
EY665794_ssr98 microsatellite EY665794_ssr98:98..112. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY665794 vs. ExPASy Swiss-Prot
Match: VA722_ARATH (Vesicle-associated membrane protein 722 OS=Arabidopsis thaliana GN=VAMP722 PE=2 SV=2)

HSP 1 Score: 259.225 bits (661), Expect = 1.333e-68
Identity = 127/180 (70.56%), Postives = 145/180 (80.56%), Query Frame = 1
Query:  139 MSQKSLIYAFVARGNVVLAEYTEFSGNFNSIAYQCLQKLPASNNKFTYNCDAHTFNYLVDNGYTYCVVADESSGRQIPMAFLERVKDEFVSKYGGGKAATAPANGLNKEFGPKLKELMQYCVDHPEEISKLAKVKAQGSEAKGGMMENIGKGLKRGEKMSYWSIRMENFNHQGPKLSEMG 678
            M+Q+SLIY+FVARG V+L E+T+F GNF SIA QCLQKLP+SNNKFTYNCD HTFNYLV+NG+TYCVVA +S+GRQIPMAFLERVK++F  +YGGGKAATA AN LNKEFG KLKE MQYC+DHP+EISKLAKVKAQ SE KG MMENI K L RGEK+     + EN   Q       G
Sbjct:    1 MAQQSLIYSFVARGTVILVEFTDFKGNFTSIAAQCLQKLPSSNNKFTYNCDGHTFNYLVENGFTYCVVAVDSAGRQIPMAFLERVKEDFNKRYGGGKAATAQANSLNKEFGSKLKEHMQYCMDHPDEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRTQG 180          

HSP 2 Score: 22.7126 bits (47), Expect = 1.333e-68
Identity = 9/11 (81.82%), Postives = 9/11 (81.82%), Query Frame = 3
Query:  774 LSIGGGFTCGK 806
            LSI GGF CGK
Sbjct:  211 LSICGGFNCGK 221          
BLAST of EY665794 vs. ExPASy Swiss-Prot
Match: VA726_ARATH (Putative vesicle-associated membrane protein 726 OS=Arabidopsis thaliana GN=VAMP726 PE=2 SV=2)

HSP 1 Score: 259.61 bits (662), Expect = 1.641e-68
Identity = 127/180 (70.56%), Postives = 142/180 (78.89%), Query Frame = 1
Query:  139 MSQKSLIYAFVARGNVVLAEYTEFSGNFNSIAYQCLQKLPASNNKFTYNCDAHTFNYLVDNGYTYCVVADESSGRQIPMAFLERVKDEFVSKYGGGKAATAPANGLNKEFGPKLKELMQYCVDHPEEISKLAKVKAQGSEAKGGMMENIGKGLKRGEKMSYWSIRMENFNHQGPKLSEMG 678
            M Q+SLIY+FVARG V+LAEYTEF GNF S+A QCLQKLP+SNNKFTYNCD HTFNYL DNG+TYCVV  ES+GRQIPMAFLERVK++F  +YGGGKA+TA AN LNKEFG KLKE MQYC DHPEEISKL+KVKAQ +E KG MMENI K L RGEK+     + EN   Q       G
Sbjct:    1 MGQQSLIYSFVARGTVILAEYTEFKGNFTSVAAQCLQKLPSSNNKFTYNCDGHTFNYLADNGFTYCVVVIESAGRQIPMAFLERVKEDFNKRYGGGKASTAKANSLNKEFGSKLKEHMQYCADHPEEISKLSKVKAQVTEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRTQG 180          
BLAST of EY665794 vs. ExPASy Swiss-Prot
Match: VA725_ARATH (Vesicle-associated membrane protein 725 OS=Arabidopsis thaliana GN=VAMP725 PE=2 SV=2)

HSP 1 Score: 256.144 bits (653), Expect = 1.815e-67
Identity = 125/180 (69.44%), Postives = 142/180 (78.89%), Query Frame = 1
Query:  139 MSQKSLIYAFVARGNVVLAEYTEFSGNFNSIAYQCLQKLPASNNKFTYNCDAHTFNYLVDNGYTYCVVADESSGRQIPMAFLERVKDEFVSKYGGGKAATAPANGLNKEFGPKLKELMQYCVDHPEEISKLAKVKAQGSEAKGGMMENIGKGLKRGEKMSYWSIRMENFNHQGPKLSEMG 678
            M Q++LIY+FVARG V+L EYTEF GNF ++A QCLQKLP+SNNKFTYNCD HTFNYLV+NG+TYCVVA ES GRQIPMAFLERVK++F  +YGGGKA TA AN LN+EFG KLKE MQYCVDHP+EISKLAKVKAQ +E KG MMENI K L RGEK+     + EN   Q       G
Sbjct:   66 MGQQNLIYSFVARGTVILVEYTEFKGNFTAVAAQCLQKLPSSNNKFTYNCDGHTFNYLVENGFTYCVVAVESVGRQIPMAFLERVKEDFNKRYGGGKATTAQANSLNREFGSKLKEHMQYCVDHPDEISKLAKVKAQVTEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRTQG 245          
BLAST of EY665794 vs. ExPASy Swiss-Prot
Match: VA721_ARATH (Vesicle-associated membrane protein 721 OS=Arabidopsis thaliana GN=VAMP721 PE=2 SV=1)

HSP 1 Score: 255.758 bits (652), Expect = 2.370e-67
Identity = 125/180 (69.44%), Postives = 145/180 (80.56%), Query Frame = 1
Query:  139 MSQKSLIYAFVARGNVVLAEYTEFSGNFNSIAYQCLQKLPASNNKFTYNCDAHTFNYLVDNGYTYCVVADESSGRQIPMAFLERVKDEFVSKYGGGKAATAPANGLNKEFGPKLKELMQYCVDHPEEISKLAKVKAQGSEAKGGMMENIGKGLKRGEKMSYWSIRMENFNHQGPKLSEMG 678
            M+Q+SLIY+FVARG V+L E+T+F GNF SIA QCLQKLP+SNNKFTYNCD HTFNYLV++G+TYCVVA +S+GRQIPM+FLERVK++F  +YGGGKAATA AN LNKEFG KLKE MQYC+DHP+EISKLAKVKAQ SE KG MMENI K L RGEK+     + EN   Q       G
Sbjct:    1 MAQQSLIYSFVARGTVILVEFTDFKGNFTSIAAQCLQKLPSSNNKFTYNCDGHTFNYLVEDGFTYCVVAVDSAGRQIPMSFLERVKEDFNKRYGGGKAATAQANSLNKEFGSKLKEHMQYCMDHPDEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRTTG 180          
BLAST of EY665794 vs. ExPASy Swiss-Prot
Match: VA723_ARATH (Vesicle-associated membrane protein 723 OS=Arabidopsis thaliana GN=VAMP723 PE=2 SV=1)

HSP 1 Score: 223.787 bits (569), Expect = 9.980e-58
Identity = 107/156 (68.59%), Postives = 127/156 (81.41%), Query Frame = 1
Query:  139 MSQKSLIYAFVARGNVVLAEYTEFSGNFNSIAYQCLQKLPASNNKFTYNCDAHTFNYLVDNGYTYCVVADESSGRQIPMAFLERVKDEFVSKYGGGKAATAPANGLNKEFGPKLKELMQYCVDHPEEISKLAKVKAQGSEAKGGMMENIGKGLKRG 606
            M+Q+SL Y+F+ARG V+L E+T+F GNF S+A Q L+ LP+SNNKFTYNCD HTFN LV+NG+TYCVVA +S+GR+IPMAFLERVK++F  +YGG KAAT  AN LNKEFG  LKE MQYC+DHP+EIS LAK KAQ SE K  MMENI K L RG
Sbjct:    1 MAQQSLFYSFIARGTVILVEFTDFKGNFTSVAAQYLENLPSSNNKFTYNCDGHTFNDLVENGFTYCVVAVDSAGREIPMAFLERVKEDFYKRYGGEKAATDQANSLNKEFGSNLKEHMQYCMDHPDEISNLAKAKAQVSEVKSLMMENIEKVLARG 156          
BLAST of EY665794 vs. ExPASy Swiss-Prot
Match: VA724_ARATH (Vesicle-associated membrane protein 724 OS=Arabidopsis thaliana GN=VAMP724 PE=2 SV=2)

HSP 1 Score: 223.016 bits (567), Expect = 1.702e-57
Identity = 111/181 (61.33%), Postives = 136/181 (75.14%), Query Frame = 1
Query:  139 MSQKSLIYAFVARGNVVLAEYTEFSGNFNSIAYQCLQKLPASNN-KFTYNCDAHTFNYLVDNGYTYCVVADESSGRQIPMAFLERVKDEFVSKYGGGKAATAPANGLNKEFGPKLKELMQYCVDHPEEISKLAKVKAQGSEAKGGMMENIGKGLKRGEKMSYWSIRMENFNHQGPKLSEMG 678
            M Q+S IY+FVARG ++LAEYTEF+GNF SIA QCLQKLP+S+N KFTYNCD HTFN+LV++GY YCVVA +S  +QI +AFLERVK +F  +YGGGKA+TA A  LNKEFGP +KE M Y VDH EEI KL KVKAQ SE K  M+ENI K + RGE ++  + + EN   Q  +  + G
Sbjct:    1 MGQESFIYSFVARGTMILAEYTEFTGNFPSIAAQCLQKLPSSSNSKFTYNCDHHTFNFLVEDGYAYCVVAKDSLSKQISIAFLERVKADFKKRYGGGKASTAIAKSLNKEFGPVMKEHMNYIVDHAEEIEKLIKVKAQVSEVKSIMLENIDKAIDRGENLTVLTDKTENLRSQAQEYKKQG 181          
BLAST of EY665794 vs. ExPASy Swiss-Prot
Match: VA727_ARATH (Vesicle-associated membrane protein 727 OS=Arabidopsis thaliana GN=VAMP727 PE=2 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 1.543e-50
Identity = 102/199 (51.26%), Postives = 132/199 (66.33%), Query Frame = 1
Query:  139 MSQKSLIYAFVARGNVVLAEYTEFSGNFNSIAYQCLQKLPASNNKFTYNCDAHTFNYLVDNGYTYCVVADESSGRQIPMAFLERVKDEFVSKYGGG-------------------KAATAPANGLNKEFGPKLKELMQYCVDHPEEISKLAKVKAQGSEAKGGMMENIGKGLKRGEKMSYWSIRMENFNHQGPKLSEMG 678
            MSQK LIY+FVA+G VVLAE+T +SGNF++IA QCLQKLP +++K+TY+CD HTFN+LVDNG+ + VVADES+GR +P  FLERVK++F  +Y                          + A  L++EFGP LKE MQYC+ HPEE+SKL+K+KAQ +E KG MM+NI K L RGEK+     + EN   Q       G
Sbjct:    1 MSQKGLIYSFVAKGTVVLAEHTPYSGNFSTIAVQCLQKLPTNSSKYTYSCDGHTFNFLVDNGFVFLVVADESTGRSVPFVFLERVKEDFKKRYEASIKNDERHPLADEDEDDDLFGDRFSVAYNLDREFGPILKEHMQYCMSHPEEMSKLSKLKAQITEVKGIMMDNIEKVLDRGEKIELLVDKTENLQFQADSFQRQG 199          
BLAST of EY665794 vs. ExPASy Swiss-Prot
Match: VAM7B_DICDI (Vesicle-associated membrane protein 7B OS=Dictyostelium discoideum GN=vamp7B PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 2.100e-23
Identity = 64/177 (36.16%), Postives = 101/177 (57.06%), Query Frame = 1
Query:  154 LIYAFVARGNVVLAEYTEFSGNFNSIAYQCLQKLPASNNKFTYNCDAHTFNYLVDNGYTYCVVADESSGRQIPMAFLERVKDEFVSKYGGGKAATAPANGLNKEFGPKLKELMQYCVDHPEEISKLAKVKAQGSEAKGGMMENIG-KGLKRGEKMSYWSIRMENFNHQGPKLSEMGE 681
            +IY+ VARG+ VLAE+T  +GNF +I  + L  +P ++ K +Y  + + F+YLV +  TY  +ADE  GR+IP  FL+ VK+ F S Y G K  TA A G+N +F   L+ LM +   +   +  +++  A+  E K  ++ +I  + LKRGEK+     R +  N Q  K  +  +
Sbjct:    3 IIYSLVARGSSVLAEFTSTNGNFVTITRRILDLIPPNDTKMSYVYEKYIFHYLVSDTLTYLCMADEEFGRRIPFTFLDDVKNRFKSMY-GDKGKTAIAYGMNSDFSRTLENLMDH-YSNTTRVDTMSRTMAEIDEVKNILVSDIAPQLLKRGEKIEMLVERTDTLNQQSFKFKKQSK 177          
BLAST of EY665794 vs. ExPASy Swiss-Prot
Match: VA711_ARATH (Vesicle-associated membrane protein 711 OS=Arabidopsis thaliana GN=VAMP711 PE=2 SV=2)

HSP 1 Score: 105.145 bits (261), Expect = 5.173e-22
Identity = 59/156 (37.82%), Postives = 96/156 (61.54%), Query Frame = 1
Query:  151 SLIYAFVARGNVVLAEYTEFSGNFNSIAYQCLQKLPASN-NKFTYNCDAHTFNYLVDNGYTYCVVADESSGRQIPMAFLERVKDEFVSKYGGGKAATAPANGLNKEFGPKLKELMQYCVDHPEEISKLAKVKAQGSEAKGGMMENIGKGLKRGEKM 615
            +++YA VARG VVL+E+T  S N ++IA Q L+K+P  N +  +Y+ D + F+    +G T   +A+E++GR+IP AFLE +   FV  YG     TA A  +N+EF   L + + Y  + P    ++ ++K + ++ +G M+ENI K L RGE++
Sbjct:    2 AILYALVARGTVVLSEFTATSTNASTIAKQILEKVPGDNDSNVSYSQDRYVFHVKRTDGLTVLCMAEETAGRRIPFAFLEDIHQRFVRTYGRA-VHTALAYAMNEEFSRVLSQQIDYYSNDP-NADRINRIKGEMNQVRGVMIENIDKVLDRGERL 155          
BLAST of EY665794 vs. ExPASy Swiss-Prot
Match: VA713_ARATH (Vesicle-associated membrane protein 713 OS=Arabidopsis thaliana GN=VAMP713 PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.505e-21
Identity = 60/166 (36.14%), Postives = 99/166 (59.64%), Query Frame = 1
Query:  151 SLIYAFVARGNVVLAEYTEFSGNFNSIAYQCLQKLPA--SNNKFTYNCDAHTFNYLVDNGYTYCVVADESSGRQIPMAFLERVKDEFVSKYGGGKAATAPANGLNKEFGPKLKELMQYCVDHPEEISKLAKVKAQGSEAKGGMMENIGKGLKRGEKMSYWSIRMEN 642
            ++I+A VARG VVL+E++  S N +SI+ Q L+KLP   S++  +Y+ D + F+    +G T   +ADE++GR IP AFL+ +   FV  YG     +A A  +N EF   L + M++  + P    +++++K + S+ +  M+ENI K L RGE++     + EN
Sbjct:    2 AIIFALVARGTVVLSEFSATSTNASSISKQILEKLPGNDSDSHMSYSQDRYIFHVKRTDGLTVLCMADETAGRNIPFAFLDDIHQRFVKTYGRA-IHSAQAYSMNDEFSRVLSQQMEFYSNDP-NADRMSRIKGEMSQVRNVMIENIDKVLDRGERLELLVDKTEN 165          
The following BLAST results are available for this feature:
BLAST of EY665794 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 19
Match NameE-valueIdentityDescription
VA722_ARATH1.333e-6870.56Vesicle-associated membrane protein 722 OS=Arabido... [more]
VA726_ARATH1.641e-6870.56Putative vesicle-associated membrane protein 726 O... [more]
VA725_ARATH1.815e-6769.44Vesicle-associated membrane protein 725 OS=Arabido... [more]
VA721_ARATH2.370e-6769.44Vesicle-associated membrane protein 721 OS=Arabido... [more]
VA723_ARATH9.980e-5868.59Vesicle-associated membrane protein 723 OS=Arabido... [more]
VA724_ARATH1.702e-5761.33Vesicle-associated membrane protein 724 OS=Arabido... [more]
VA727_ARATH1.543e-5051.26Vesicle-associated membrane protein 727 OS=Arabido... [more]
VAM7B_DICDI2.100e-2336.16Vesicle-associated membrane protein 7B OS=Dictyost... [more]
VA711_ARATH5.173e-2237.82Vesicle-associated membrane protein 711 OS=Arabido... [more]
VA713_ARATH1.505e-2136.14Vesicle-associated membrane protein 713 OS=Arabido... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-102-095-F06-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665794 ID=EY665794; Name=EY665794; organism=Citrus sinensis; type=EST; length=865bp
CGCGTAAAAAAGCAAAGCCCCCTTTCAAACAAAATTGGAGAGGAGAGAGA
GACCTCTTGGAGCTTTAAAACAAAATAAAAAATAAAAACAAGCCCAGATC
TCATCTCATCTCAACTCGACTCAATTAGTCTCATCAAAATGAGCCAGAAA
TCGCTGATCTACGCCTTCGTGGCGCGCGGAAATGTTGTGCTTGCTGAGTA
CACTGAGTTCAGTGGCAATTTCAACTCCATAGCCTATCAGTGCCTCCAGA
AACTCCCTGCTTCCAACAACAAGTTCACTTACAACTGTGATGCTCACACC
TTCAATTATCTCGTCGATAATGGTTACACATATTGTGTGGTCGCAGATGA
ATCGTCCGGAAGACAAATACCGATGGCTTTTCTGGAGCGCGTCAAGGATG
AATTTGTTTCCAAATATGGGGGTGGAAAGGCTGCCACGGCTCCTGCCAAT
GGCCTGAACAAGGAATTTGGACCAAAATTGAAAGAACTTATGCAGTACTG
TGTTGATCATCCTGAGGAGATCAGCAAGCTTGCGAAGGTTAAGGCTCAAG
GTTCAGAAGCCAAAGGGGGTATGATGGAGAATATTGGAAAAGGTTTAAAA
AGGGGGGAAAAAATGAGCTACTGGTCGATAAGAATGGAAAACTTCAATCA
CCAGGGACCAAAACTTTCGGAGATGGGGGAACACAATGGGGAAGGAAAAG
GGGGCGGCAAAAAAGGAAAACAAACCGGAATGGTTTGGGGAAACACGGTT
GGGCTGGACCCTCACATAACCCTCTCTCGATTGGCGGGGGGTTCACGTGC
GGAAAAAGGGGGGGAATTCCTGCCAGAAGGGTTATTTAAGCTTCCTACGA
CAGCGGTGCAGGGAG
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