EY665791

Overview
NameEY665791
Unique NameEY665791
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length873
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY665791_ssr386 microsatellite EY665791_ssr386:386..401. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY665791 vs. ExPASy Swiss-Prot
Match: CSLB4_ARATH (Cellulose synthase-like protein B4 OS=Arabidopsis thaliana GN=CSLB4 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 6.318e-41
Identity = 47/75 (62.67%), Postives = 56/75 (74.67%), Query Frame = 2
Query:  422 RIQELPPVDMFVTTADAELKPTIITVNTVLALLAIDNPVHKLACYVSDDACSPLNF*SLV*TSKFPKFWVHSAKR 646
            R+ ELPPVDMFVTTAD   +P +I VNTVL+LLA++ P +KLACYVSDD CSPL + SL   SKF K WV   K+
Sbjct:   88 RVHELPPVDMFVTTADPVREPPLIVVNTVLSLLAVNYPANKLACYVSDDGCSPLTYFSLKEASKFAKIWVPFCKK 162          

HSP 2 Score: 89.7373 bits (221), Expect = 6.318e-41
Identity = 40/88 (45.45%), Postives = 54/88 (61.36%), Query Frame = 3
Query:   48 MANTPLSCLPLYEKVFHKNTYHRALDVIIXXXXXXXXXYRLSTVKNHGFAWFLAFLCESCFTFIWILIDNCKWTPLTYKTYPQRLQER 311
            MA +     PL E++ HK+ + RA+D+ I         YR+  V      W +AFLCE+CFTF+W+LI N KW+P  YKTYP+RL ER
Sbjct:    1 MAESSSPLPPLCERISHKSYFLRAVDLTILGLLLSLLLYRILHVNQKDTVWIVAFLCETCFTFVWLLITNIKWSPADYKTYPERLDER 88          
BLAST of EY665791 vs. ExPASy Swiss-Prot
Match: CSLB3_ARATH (Cellulose synthase-like protein B3 OS=Arabidopsis thaliana GN=CSLB3 PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 1.767e-37
Identity = 44/80 (55.00%), Postives = 56/80 (70.00%), Query Frame = 2
Query:  422 RIQELPPVDMFVTTADAELKPTIITVNTVLALLAIDNPVHKLACYVSDDACSPLNF*SLV*TSKFPKFWVHSAKRNKGKI 661
            R+ +LP VDMFVTTAD   +P I+  NT+L+LLA++ P +KLACYVSDD CSPL + SL   SKF K WV   K+   K+
Sbjct:   88 RVHDLPSVDMFVTTADPVREPPILVANTLLSLLAVNYPANKLACYVSDDGCSPLTYFSLKEASKFAKIWVPFCKKYNIKV 167          

HSP 2 Score: 84.3445 bits (207), Expect = 1.767e-37
Identity = 38/88 (43.18%), Postives = 56/88 (63.64%), Query Frame = 3
Query:   48 MANTPLSCLPLYEKVFHKNTYHRALDVIIXXXXXXXXXYRLSTVKNHGFAWFLAFLCESCFTFIWILIDNCKWTPLTYKTYPQRLQER 311
            MA++  S  PL EK+ +KN + R +D+ I         YR+  +  +   W +AFLCES F+FIW+LI + KW+P +YK+YP+RL ER
Sbjct:    1 MADSSSSLPPLCEKISYKNYFLRVVDLTILGFLFSLLLYRILLMNQNNSVWVVAFLCESFFSFIWLLITSIKWSPASYKSYPERLDER 88          
BLAST of EY665791 vs. ExPASy Swiss-Prot
Match: CSLB2_ARATH (Cellulose synthase-like protein B2 OS=Arabidopsis thaliana GN=CSLB2 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 7.157e-36
Identity = 45/80 (56.25%), Postives = 56/80 (70.00%), Query Frame = 2
Query:  422 RIQELPPVDMFVTTADAELKPTIITVNTVLALLAIDNPVHKLACYVSDDACSPLNF*SLV*TSKFPKFWVHSAKRNKGKI 661
            R+ +LP VDMFV TAD   +P I+ VNTVL+LLA++ P +KLACYVSDD CSPL + SL   SKF K WV   K+   K+
Sbjct:   88 RVYDLPSVDMFVPTADPVREPPIMVVNTVLSLLAVNYPANKLACYVSDDGCSPLTYFSLKEASKFAKIWVPFCKKYNLKV 167          

HSP 2 Score: 79.337 bits (194), Expect = 7.157e-36
Identity = 36/88 (40.91%), Postives = 52/88 (59.09%), Query Frame = 3
Query:   48 MANTPLSCLPLYEKVFHKNTYHRALDVIIXXXXXXXXXYRLSTVKNHGFAWFLAFLCESCFTFIWILIDNCKWTPLTYKTYPQRLQER 311
            MA++  S  PLYE + +K+   RA+D+ I         +R+  +  +G  W +AFLCESCF+F+W+L    KW+P   K YP RL ER
Sbjct:    1 MADSSCSLPPLYENISYKSYILRAVDLTILGLLFSLLLHRILYMSQNGIIWLVAFLCESCFSFVWLLSTCTKWSPAETKPYPDRLDER 88          
BLAST of EY665791 vs. ExPASy Swiss-Prot
Match: CSLB6_ARATH (Cellulose synthase-like protein B6 OS=Arabidopsis thaliana GN=CSLB6 PE=2 SV=2)

HSP 1 Score: 89.7373 bits (221), Expect = 5.930e-35
Identity = 44/75 (58.67%), Postives = 53/75 (70.67%), Query Frame = 2
Query:  422 RIQELPPVDMFVTTADAELKPTIITVNTVLALLAIDNPVHKLACYVSDDACSPLNF*SLV*TSKFPKFWVHSAKR 646
            R+ +LP VDMFV TAD   +P II VNTVL+LLA++ P +KLACYVSDD CSPL + SL   SKF K W    K+
Sbjct:   88 RVHDLPSVDMFVPTADPVREPPIIVVNTVLSLLAVNYPANKLACYVSDDGCSPLTYFSLKEASKFVKIWAPFCKK 162          

HSP 2 Score: 77.411 bits (189), Expect = 5.930e-35
Identity = 36/88 (40.91%), Postives = 52/88 (59.09%), Query Frame = 3
Query:   48 MANTPLSCLPLYEKVFHKNTYHRALDVIIXXXXXXXXXYRLSTVKNHGFAWFLAFLCESCFTFIWILIDNCKWTPLTYKTYPQRLQER 311
            MA++  S LPL E++ HK+   R +D+ I         YR+  +  +   W +AFLCESCF+F+W++I   KW+P   K YP RL ER
Sbjct:    1 MADSSSSLLPLCERISHKSYILRIVDLTILVLLFSLLWYRILHMCENNTIWLVAFLCESCFSFMWLIITCIKWSPAEDKPYPNRLDER 88          
BLAST of EY665791 vs. ExPASy Swiss-Prot
Match: CSLB1_ARATH (Cellulose synthase-like protein B1 OS=Arabidopsis thaliana GN=CSLB1 PE=2 SV=2)

HSP 1 Score: 88.9669 bits (219), Expect = 3.897e-30
Identity = 43/80 (53.75%), Postives = 56/80 (70.00%), Query Frame = 2
Query:  422 RIQELPPVDMFVTTADAELKPTIITVNTVLALLAIDNPVHKLACYVSDDACSPLNF*SLV*TSKFPKFWVHSAKRNKGKI 661
            R+ +LP VDMFV TAD   +P I+ V+TVL+LLA++ P +KLACYVSDD CSPL + SL   SKF K WV   K+   ++
Sbjct:   88 RVHDLPSVDMFVPTADPVREPPIMVVDTVLSLLAVNYPANKLACYVSDDGCSPLTYFSLKEASKFAKIWVPFCKKYNTRV 167          

HSP 2 Score: 62.003 bits (149), Expect = 3.897e-30
Identity = 29/88 (32.95%), Postives = 46/88 (52.27%), Query Frame = 3
Query:   48 MANTPLSCLPLYEKVFHKNTYHRALDVIIXXXXXXXXXYRLSTVKNHGFAWFLAFLCESCFTFIWILIDNCKWTPLTYKTYPQRLQER 311
            MA++  S  PL E++ + N + RA+ + +         +R+     +   W +AF CESCF  + +LI   KW+P   K +P RL ER
Sbjct:    1 MADSSFSLPPLCERISYTNYFLRAVYLTVLGLFFSLLLHRIRHTSEYDNVWLVAFFCESCFFLVCLLITCLKWSPADTKPFPDRLDER 88          
BLAST of EY665791 vs. ExPASy Swiss-Prot
Match: CSLH1_ORYSJ (Cellulose synthase-like protein H1 OS=Oryza sativa subsp. japonica GN=CSLH1 PE=2 SV=2)

HSP 1 Score: 87.4261 bits (215), Expect = 6.744e-26
Identity = 45/78 (57.69%), Postives = 56/78 (71.79%), Query Frame = 2
Query:  422 RIQELPPVDMFVTTADAELKPTIITVNTVLALLAIDNPV--HKLACYVSDDACSPLNF*SLV*TSKFPKFWVHSAKRN 649
            RI ELP VDMFVTTAD  L+P ++TVNTVL+LLA+D P    KLACYVSDD CSPL   +L   ++F + WV   +R+
Sbjct:   87 RIDELPAVDMFVTTADPVLEPPLVTVNTVLSLLALDYPAAGEKLACYVSDDGCSPLTCYALREAARFARTWVPFCRRH 164          

HSP 2 Score: 49.2914 bits (116), Expect = 6.744e-26
Identity = 28/79 (35.44%), Postives = 43/79 (54.43%), Query Frame = 3
Query:   78 LYEKVFHKNTYHRALDVIIXXXXXXXXXYRLSTVKNHGFAWFLAFL-CESCFTFIWILIDNCKWTPLTYKTYPQRLQER 311
            L E+V  + T  R  D+ I         +R+  + + G  W  A L CE+ FTF+W+L  N KW+P+ + T+P+ L ER
Sbjct:   11 LQERVPIRRTAWRLADLAILFLLLALLLHRV--LHDSGAPWRRAALACEAWFTFMWLLNVNAKWSPVRFDTFPENLAER 87          
BLAST of EY665791 vs. ExPASy Swiss-Prot
Match: CESA6_ORYSJ (Probable cellulose synthase A catalytic subunit 6 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA6 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.684e-19
Identity = 35/72 (48.61%), Postives = 50/72 (69.44%), Query Frame = 2
Query:  431 ELPPVDMFVTTADAELKPTIITVNTVLALLAIDNPVHKLACYVSDDACSPLNF*SLV*TSKFPKFWVHSAKR 646
            +L PVD FV+T D   +P ++T NTVL++L++D PV K++CYVSDD  + L F +L  TS+F K WV   K+
Sbjct:  354 QLAPVDFFVSTVDPSKEPPLVTANTVLSILSVDYPVEKVSCYVSDDGAAMLTFEALSETSEFAKKWVPFCKK 425          

HSP 2 Score: 39.2762 bits (90), Expect = 1.684e-19
Identity = 20/51 (39.22%), Postives = 26/51 (50.98%), Query Frame = 3
Query:  162 YRLSTVKNHGFA-WFLAFLCESCFTFIWILIDNCKWTPLTYKTYPQRLQER 311
            YR+    N  FA W ++ +CE  F   WIL    KW P+  +TY  RL  R
Sbjct:  295 YRVMHPVNDAFALWLISVICEIWFAMSWILDQFPKWLPIERETYLDRLSLR 345          
BLAST of EY665791 vs. ExPASy Swiss-Prot
Match: CESA1_ARATH (Cellulose synthase A catalytic subunit 1 [UDP-forming] OS=Arabidopsis thaliana GN=CESA1 PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 8.141e-19
Identity = 36/72 (50.00%), Postives = 51/72 (70.83%), Query Frame = 2
Query:  431 ELPPVDMFVTTADAELKPTIITVNTVLALLAIDNPVHKLACYVSDDACSPLNF*SLV*TSKFPKFWVHSAKR 646
            +L PVD+FV+T D   +P ++T NTVL++L++D PV K+ACYVSDD  + L F SL  T++F K WV   K+
Sbjct:  350 QLVPVDVFVSTVDPLKEPPLVTANTVLSILSVDYPVDKVACYVSDDGSAMLTFESLSETAEFAKKWVPFCKK 421          

HSP 2 Score: 37.7354 bits (86), Expect = 8.141e-19
Identity = 18/45 (40.00%), Postives = 23/45 (51.11%), Query Frame = 3
Query:  177 VKNHGFAWFLAFLCESCFTFIWILIDNCKWTPLTYKTYPQRLQER 311
            VKN    W  + +CE  F F W+L    KW P+  +TY  RL  R
Sbjct:  297 VKNAYPLWLTSVICEIWFAFSWLLDQFPKWYPINRETYLDRLAIR 341          
BLAST of EY665791 vs. ExPASy Swiss-Prot
Match: CESA4_ARATH (Cellulose synthase A catalytic subunit 4 [UDP-forming] OS=Arabidopsis thaliana GN=CESA4 PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 8.145e-19
Identity = 37/72 (51.39%), Postives = 52/72 (72.22%), Query Frame = 2
Query:  431 ELPPVDMFVTTADAELKPTIITVNTVLALLAIDNPVHKLACYVSDDACSPLNF*SLV*TSKFPKFWVHSAKR 646
            +L PVD+FV+T D   +P IIT NT+L++LA+D PV+K++CYVSDD  S L F +L  TS+F + WV   K+
Sbjct:  290 KLAPVDVFVSTVDPLKEPPIITANTILSILAVDYPVNKVSCYVSDDGASMLLFDTLSETSEFARRWVPFCKK 361          

HSP 2 Score: 36.965 bits (84), Expect = 8.145e-19
Identity = 24/83 (28.92%), Postives = 37/83 (44.58%), Query Frame = 3
Query:   75 PLYEKV---FHKNTYHRALDVIIXXXXXXXXXYRLSTVKNHGFA-WFLAFLCESCFTFIWILIDNCKWTPLTYKTYPQRLQER 311
            PL+ KV     K + +R + V+          +R+ T     +  W ++ +CE  F   WIL    KW P+  +TY  RL  R
Sbjct:  199 PLWRKVPISSSKISPYRIVIVLRLVILVFFFRFRILTPAKDAYPLWLISVICEIWFALSWILDQFPKWFPINRETYLDRLSMR 281          
BLAST of EY665791 vs. ExPASy Swiss-Prot
Match: CESA5_ORYSJ (Probable cellulose synthase A catalytic subunit 5 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA5 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.058e-18
Identity = 37/72 (51.39%), Postives = 50/72 (69.44%), Query Frame = 2
Query:  431 ELPPVDMFVTTADAELKPTIITVNTVLALLAIDNPVHKLACYVSDDACSPLNF*SLV*TSKFPKFWVHSAKR 646
            +L PVD FV+T D   +P ++T NTVL++LA+D PV K++CYVSDD  + L F +L  TS+F K WV   KR
Sbjct:  353 QLAPVDFFVSTVDPMKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFEALSETSEFAKKWVPFCKR 424          

HSP 2 Score: 35.4242 bits (80), Expect = 1.058e-18
Identity = 19/51 (37.25%), Postives = 25/51 (49.02%), Query Frame = 3
Query:  162 YRLSTVKNHGFA-WFLAFLCESCFTFIWILIDNCKWTPLTYKTYPQRLQER 311
            YR+       FA W ++ +CE  F   WIL    KW P+  +TY  RL  R
Sbjct:  294 YRVMHPVPDAFALWLISVICEIWFAMSWILDQFPKWFPIERETYLDRLTLR 344          
The following BLAST results are available for this feature:
BLAST of EY665791 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 51
Match NameE-valueIdentityDescription
CSLB4_ARATH6.318e-4162.67Cellulose synthase-like protein B4 OS=Arabidopsis ... [more]
CSLB3_ARATH1.767e-3755.00Cellulose synthase-like protein B3 OS=Arabidopsis ... [more]
CSLB2_ARATH7.157e-3656.25Cellulose synthase-like protein B2 OS=Arabidopsis ... [more]
CSLB6_ARATH5.930e-3558.67Cellulose synthase-like protein B6 OS=Arabidopsis ... [more]
CSLB1_ARATH3.897e-3053.75Cellulose synthase-like protein B1 OS=Arabidopsis ... [more]
CSLH1_ORYSJ6.744e-2657.69Cellulose synthase-like protein H1 OS=Oryza sativa... [more]
CESA6_ORYSJ1.684e-1948.61Probable cellulose synthase A catalytic subunit 6 ... [more]
CESA1_ARATH8.141e-1950.00Cellulose synthase A catalytic subunit 1 [UDP-form... [more]
CESA4_ARATH8.145e-1951.39Cellulose synthase A catalytic subunit 4 [UDP-form... [more]
CESA5_ORYSJ1.058e-1851.39Probable cellulose synthase A catalytic subunit 5 ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-102-095-F03-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665791 ID=EY665791; Name=EY665791; organism=Citrus sinensis; type=EST; length=873bp
TGCCGAAACCCAAAAATCCTTTTTACGAGTACTTGTTTTTCAAGCTCATG
GCCAATACACCCTTGTCATGTCTCCCTCTATACGAAAAAGTTTTTCATAA
AAACACATATCATAGGGCTTTAGATGTTATCATCTTGTTCCTTCTTCTAT
GTCTGCTCTTCTATCGGCTCTCAACGGTGAAGAATCATGGATTTGCTTGG
TTTCTTGCTTTTCTATGTGAGTCTTGTTTTACTTTCATCTGGATTCTCAT
CGACAACTGCAAGTGGACTCCTTTGACCTACAAAACATATCCCCAACGTC
TCCAAGAAAGGTAACAAATCAAATAACGTTAGCATTAATAATTTCCGCAT
CATTTGCAATTGTCTTTGTCATTTTGCAAGTTACTACACACACACACACA
CGCACATGTGTACGACTCAACAGGATACAGGAGCTGCCCCCAGTGGACAT
GTTTGTGACAACTGCTGATGCTGAACTCAAGCCGACAATCATCACTGTAA
ACACAGTGCTGGCTTTGTTGGCAATTGATAATCCAGTTCACAAGCTCGCT
TGCTATGTTTCTGATGATGCCTGCTCCCCTCTCAATTTCTAATCTCTTGT
TTAAACTTCTAAATTTCCTAAATTTTGGGTTCATTCTGCAAAAAGGAATA
AAGGAAAAATAAAAGCTCCCCTTTAAAAACTTCCAAAATATTGACCCGCC
GAATTCAAGTTCAGGGGAATCTCCTTGCAAATTGGGAAAAACTTTAAAAA
AAGATTTGAATAACTTTACCCAAAAACTTAAAAATGGCCCCCCAAAAAAT
TTTTCTTTTATTTTTCTTAAAGGGAGAAAATGGGGGTTTTTCTCCCAATA
AAAAACCCACTGAAACTCCCCCC
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