CN186575

Overview
NameCN186575
Unique NameCN186575
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length807
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CN186575 vs. ExPASy Swiss-Prot
Match: AKR2_ARATH (Ankyrin repeat domain-containing protein 2 OS=Arabidopsis thaliana GN=AKR2 PE=1 SV=2)

HSP 1 Score: 252.292 bits (643), Expect = 2.341e-66
Identity = 126/204 (61.76%), Postives = 155/204 (75.98%), Query Frame = 3 
Query:  201 NPFDFSAMSGLLNDPSIKELAEQIAKDPAFNSMAEQLQKTLHGANAEESIPQFDTTQYYSTMQQVMQNPQFMTMAERLGNALMQDPSMSHMMESLTNPTKKDQIEERMAKIKEDPSLKPILDEIESGGPSAMMKYWNDKDVLQKLGEAMGLAVGG--DATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGADK 806
            N FDFS M+ +LNDPSI+E+AEQIAKDPAFN +AEQLQ+++  A  E   P FD  QY +TMQQVM NP+F TMAE+LG AL+QDP MS  +++ +NP   +   ERMA++KEDP LKPILDEI++GGPSAMMKYWND +VL+KLGEAMG+ V G  D T SA+     E  E G E+ESIVH TAS+GD EGLK ALA+G +K
Sbjct:   45 NAFDFSNMASILNDPSIREMAEQIAKDPAFNQLAEQLQRSIPNAGQEGGFPNFDPQQYVNTMQQVMHNPEFKTMAEKLGTALVQDPQMSPFLDAFSNPETAEHFTERMARMKEDPELKPILDEIDAGGPSAMMKYWNDPEVLKKLGEAMGMPVAGLPDQTVSAE----PEVAEEGEEEESIVHQTASLGDVEGLKAALASGGNK 244
The following BLAST results are available for this feature:
BLAST of CN186575 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
AKR2_ARATH2.341e-6661.76Ankyrin repeat domain-containing protein 2 OS=Arab... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS05_0003C03_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0003C03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186575 ID=CN186575; Name=CN186575; organism=Citrus sinensis; type=EST; length=807bp
TCTCCTTCAAGTCTCTCCGATTCAGCAGCTGTTTAGTTCGCATGGTTTCT
CCTCCCACCAAGGATGCTCCCGCTGATAAGAAAGCAGAAGGATCGACCCC
TAAGTCAGAAGCAACTTCGGGGTCTGTTAGAGACTCATCCAGTTCGCCTT
CCGCTGCTTCTGCTGCAAGTGCTTTTCCAGGAGTTGGTGGCGCTGCTCCA
AATCCTTTTGATTTCTCCGCCATGAGTGGCCTTCTTAATGATCCGAGCAT
TAAGGAACTAGCTGAACAGATTGCGAAAGATCCAGCATTCAATTCCATGG
CCGAGCAACTTCAGAAAACTTTGCATGGTGCAAATGCTGAGGAGAGTATT
CCACAGTTTGACACAACACAGTATTACTCCACCATGCAACAGGTTATGCA
GAATCCTCAGTTTATGACTATGGCTGAGCGCCTTGGTAATGCTTTAATGC
AGGACCCATCAATGTCTCATATGATGGAGAGTTTGACAAACCCTACAAAA
AAAGACCAGATTGAGGAAAGAATGGCAAAAATCAAGGAAGATCCCTCTTT
GAAGCCTATTTTGGATGAGATAGAGTCTGGTGGACCATCTGCTATGATGA
AGTACTGGAATGATAAAGATGTTTTGCAGAAATTGGGTGAAGCAATGGGT
CTTGCAGTTGGTGGGGATGCGACCACTTCTGCTGATAATGCGGGGGCAGA
TGAAGCAGAAGAAGTGGGAAATGAGGATGAGTCAATTGTTCATCACACTG
CCAGTGTTGGTGATGCTGAGGGTTTGAAAAATGCATTGGCAGCTGGTGCT
GATAAAG
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