CN186574
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN186574 vs. ExPASy Swiss-Prot
Match: HS21C_SOLLC (Small heat shock protein, chloroplastic OS=Solanum lycopersicum GN=HSP21 PE=2 SV=1) HSP 1 Score: 241.121 bits (614), Expect = 3.786e-63 Identity = 124/187 (66.31%), Postives = 143/187 (76.47%), Query Frame = -3 Query: 115 AQAGGENKDTSVDVHVNSG----NQGTQVERRPRRTALDISPFGLMDPSFPTRTMRQMLDTMDRLLEDTMAFPGRSRAGGGGQVRTPWDIKEEENEIKMRFDMPGLFXXXXXXXXXXXXXVIKGEHRAEEAG------GASFSSYDTRLQLPDNCEKDKVKAELKNGVLYISIPKTKVERKVIDVQI 645 A+A G+NKDTSVDVH +S NQGT VERRP R ALD+SPFG++DP P RTMRQM+DTMDRL EDTM FPGR+RA G G++RTPWDI ++ENEIKMRFDMPGL VIKGEH+ EE G G ++SSYDTRL LPDN KDK+KAELKNGVL+ISIPKT+VE+KVIDVQI Sbjct: 48 ARATGDNKDTSVDVHHSSAQGGNNQGTAVERRPTRMALDVSPFGVLDPMSPMRTMRQMIDTMDRLFEDTMTFPGRNRASGTGEIRTPWDIHDDENEIKMRFDMPGLSKEDVKVSVENDMLVIKGEHKKEEDGRDKHSWGRNYSSYDTRLSLPDNVVKDKIKAELKNGVLFISIPKTEVEKKVIDVQI 234
BLAST of CN186574 vs. ExPASy Swiss-Prot
Match: HS22C_PETHY (Small heat shock protein, chloroplastic OS=Petunia hybrida GN=HSP22 PE=2 SV=1) HSP 1 Score: 238.039 bits (606), Expect = 3.205e-62 Identity = 125/187 (66.84%), Postives = 143/187 (76.47%), Query Frame = -3 Query: 115 AQAGGENKDTSVDVHVNSGNQG-----TQVERRPRRTALDISPFGLMDPSFPTRTMRQMLDTMDRLLEDTMAFPGRSRAGGGGQVRTPWDIKEEENEIKMRFDMPGLFXXXXXXXXXXXXXVIKGEHRAEEAG-----GASFSSYDTRLQLPDNCEKDKVKAELKNGVLYISIPKTKVERKVIDVQI 645 AQA G+NKDTSVDVHV++ NQG + VERRPRR ALD+SPFGL+DP P RTMRQM+DTMDRL EDTM FPG SR G G++R PWDIK++ENEIKMRFDMPGL VIKGEH+ EE+G G ++SSYDTRL LPDN +KDKVKAELKNGVL ISIPKTKVE+KV DV+I Sbjct: 55 AQATGDNKDTSVDVHVSNNNQGGNNQGSAVERRPRRMALDVSPFGLLDPMSPMRTMRQMMDTMDRLFEDTMTFPG-SRNRGTGEIRAPWDIKDDENEIKMRFDMPGLSKEEVKVSVEDDVLVIKGEHKKEESGKDDSWGRNYSSYDTRLSLPDNVDKDKVKAELKNGVLLISIPKTKVEKKVTDVEI 240
BLAST of CN186574 vs. ExPASy Swiss-Prot
Match: HS22C_SOYBN (Small heat shock protein, chloroplastic (Fragment) OS=Glycine max GN=HSP22 PE=2 SV=1) HSP 1 Score: 234.187 bits (596), Expect = 4.628e-61 Identity = 118/182 (64.84%), Postives = 144/182 (79.12%), Query Frame = -3 Query: 115 GGENKDTSVDV-HVNSGNQGTQVERRPRRTALDISPFGLMDPSFPTRTMRQMLDTMDRLLEDTMAFPGRSRAGGGGQVRTPWDIKEEENEIKMRFDMPGLFXXXXXXXXXXXXXVIKGEHRAEEAGGA-------SFSSYDTRLQLPDNCEKDKVKAELKNGVLYISIPKTKVERKVIDVQI 636 GG+NKD SV+V HV+ G+QGT VE++PRRTA+DISPFG++DP P R+MRQ+LDTMDR+ EDTM FPGR+ GGG++R PWDIK+EE+EI+MRFDMPGL VIKG H++E+ G ++SSYDTRL+LPDNCEKDKVKAELKNGVLYI+IPKTKVERKVIDVQ+ Sbjct: 1 GGDNKDNSVEVQHVSKGDQGTAVEKKPRRTAMDISPFGILDPWSPMRSMRQILDTMDRVFEDTMTFPGRNI--GGGEIRAPWDIKDEEHEIRMRFDMPGLAKEDVKVSVEDDMLVIKGGHKSEQEHGGDDSWSSRTYSSYDTRLKLPDNCEKDKVKAELKNGVLYITIPKTKVERKVIDVQV 180
BLAST of CN186574 vs. ExPASy Swiss-Prot
Match: HS21C_PEA (Small heat shock protein, chloroplastic OS=Pisum sativum GN=HSP21 PE=2 SV=1) HSP 1 Score: 222.631 bits (566), Expect = 1.393e-57 Identity = 116/187 (62.03%), Postives = 142/187 (75.94%), Query Frame = -3 Query: 115 VRAQAGGE--NKDTSVDVH-VNSGNQGTQVERRPRRTALDISPFGLMDPSFPTRTMRQMLDTMDRLLEDTMAFPGRSRAGGGGQVRTPWDIKEEENEIKMRFDMPGLFXXXXXXXXXXXXXVIKGEHRAEEAG-----GASFSSYDTRLQLPDNCEKDKVKAELKNGVLYISIPKTKVERKVIDVQI 651 VRAQAGG+ NKD SV+VH VN +QGT VER+PRR+++DISPFGL+DP P R+MRQMLDTMDR+ ED + PGR+ GGG++R PW+IK+EE+EI+MRFDMPG+ VIK +HR E G S+S YDTRL+LPDNCEK+KVKAELK+GVLYI+IPKTK+ER VIDVQI Sbjct: 47 VRAQAGGDGDNKDNSVEVHRVNKDDQGTAVERKPRRSSIDISPFGLLDPWSPMRSMRQMLDTMDRIFEDAITIPGRNI--GGGEIRVPWEIKDEEHEIRMRFDMPGVSKEDVKVSVEDDVLVIKSDHREENGGEDCWSRKSYSCYDTRLKLPDNCEKEKVKAELKDGVLYITIPKTKIERTVIDVQI 231
BLAST of CN186574 vs. ExPASy Swiss-Prot
Match: HS25P_ARATH (25.3 kDa heat shock protein, chloroplastic OS=Arabidopsis thaliana GN=HSP25.3 PE=2 SV=1) HSP 1 Score: 213.386 bits (542), Expect = 8.454e-55 Identity = 114/185 (61.62%), Postives = 132/185 (71.35%), Query Frame = -3 Query: 115 VRAQAGGENKDTSVDVHVNSGNQGTQVERRPR-RTALDISPFGLMDPSFPTRTMRQMLDTMDRLLEDTMAFPGRSRAGGG-GQVRTPWDIKEEENEIKMRFDMPGLFXXXXXXXXXXXXXVIKGEHRAEEA----GGASFSSYDTRLQLPDNCEKDKVKAELKNGVLYISIPKTKVERKVIDVQI 651 +RAQ EN V GNQG+ VE+RP+ R +D+SPFGL+DP P RTMRQMLDTMDR+ EDTM GR+R G G ++R PWDIKEEE+EIKMRFDMPGL VIKGE + E++ G S SSY TRLQLPDNCEKDK+KAELKNGVL+I+IPKTKVERKVIDVQI Sbjct: 42 IRAQDQRENSIDVVQQGQQKGNQGSSVEKRPQQRLTMDVSPFGLLDPLSPMRTMRQMLDTMDRMFEDTMPVSGRNRGGSGVSEIRAPWDIKEEEHEIKMRFDMPGLSKEDVKISVEDNVLVIKGEQKKEDSDDSWSGRSVSSYGTRLQLPDNCEKDKIKAELKNGVLFITIPKTKVERKVIDVQI 226
BLAST of CN186574 vs. ExPASy Swiss-Prot
Match: HS21C_WHEAT (Small heat shock protein, chloroplastic OS=Triticum aestivum GN=HSP21 PE=2 SV=1) HSP 1 Score: 191.43 bits (485), Expect = 3.440e-48 Identity = 104/193 (53.89%), Postives = 122/193 (63.21%), Query Frame = -3 Query: 115 AQAGGENKDTSVDVHV----NSGNQ-GTQVERRPRRTALDISPFGLMDPSFPTRTMRQMLDTMDRLLEDTMAFPGRSRAGGGGQVRTPWDIKEEENEIKMRFDMPGLFXXXXXXXXXXXXXVIKGEHRAEEAGG-----------ASFSSYDTRLQLPDNCEKDKVKAELKNGVLYISIPKTKVERKVIDVQI 645 A A EN+D SVDV V N+GNQ G V+RRPRR DISPFGL+DP P RTMRQMLDTMDRL +D + FP R + R PWDI E+E E+KMRFDMPGL VI+GEH+ E G S SSYD RL LPD C+K +V+AELKNGVL +S+PK + ERKVIDVQ+ Sbjct: 45 ASAAQENRDNSVDVQVSQAQNAGNQQGNAVQRRPRRAGFDISPFGLVDPMSPMRTMRQMLDTMDRLFDDAVGFPTRRSPAARARRRMPWDIMEDEKEVKMRFDMPGLSREEVRVMVEDDALVIRGEHKKEAGEGQGEGGDGWWKERSVSSYDMRLALPDECDKSQVRAELKNGVLLVSVPKRETERKVIDVQV 237
BLAST of CN186574 vs. ExPASy Swiss-Prot
Match: HS26P_ORYSJ (26.7 kDa heat shock protein, chloroplastic OS=Oryza sativa subsp. japonica GN=HSP26.7 PE=2 SV=1) HSP 1 Score: 187.578 bits (475), Expect = 4.968e-47 Identity = 109/196 (55.61%), Postives = 132/196 (67.35%), Query Frame = -3 Query: 115 AQAGGENKD-TSVDVHVNS--GNQ-GTQVERRPRRT-ALD-ISPFGLMDPSFPTRTMRQMLDTMDRLLEDT-MAFPGRSRAG-GGGQVRTPWDIKEEENEIKMRFDMPGLFXXXXXXXXXXXXXVIKGEHRAEEAGGA-----------SFSSYDTRLQLPDNCEKDKVKAELKNGVLYISIPKTKVERKVIDVQI 645 A A EN+D T+VDVHVN GNQ G V+RRPRR+ ALD ISPFGL+DP P RTMRQMLDTMDR+ +D + FP R G+VR PWD+ E++ E++MRFDMPGL VI+GEH+ EE GA S SSYD RL LPD C+K KV+AELKNGVL +++PKT+VERKVIDVQ+ Sbjct: 44 ASAAQENRDNTAVDVHVNQDGGNQQGNAVQRRPRRSSALDGISPFGLVDPMSPMRTMRQMLDTMDRIFDDVALGFPATPRRSLATGEVRMPWDVMEDDKEVRMRFDMPGLSREEVKVMVEDDALVIRGEHKKEEGEGAEGSGDGWWKERSVSSYDMRLALPDECDKSKVRAELKNGVLLVTVPKTEVERKVIDVQV 239
BLAST of CN186574 vs. ExPASy Swiss-Prot
Match: HS23M_ARATH (23.6 kDa heat shock protein, mitochondrial OS=Arabidopsis thaliana GN=HSP23.6 PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 4.102e-17 Identity = 64/181 (35.36%), Postives = 95/181 (52.49%), Query Frame = -3 Query: 133 AVRAQAGGENKDTSVDVHVNSGNQGTQVERR--PRRTALDISPFGLMDPSFPTRTMRQMLDTMDRLLEDTMAFPGRSRAGGGGQVRTPWDIKEEENEIKMRFDMPGLFXXXXXXXXXXXXXVIKGEHRAEEAGGASFSS----YDTRLQLPDNCEK-DKVKAELKNGVLYISIPKTKVERK 654 AV ++ N S D +G+ G + RR PRR S + DP PTR++ Q+L+ MD+ +E+ + +R G R WDIKE+++ + +R DMPGL VI+GE + EE GG S + +R+ LPD K D++KAE+KNGVL + IPK K + + Sbjct: 26 AVSSRLFNTNAVRSYDDDGENGD-GVDLYRRSVPRRRGDFFSD--VFDPFSPTRSVSQVLNLMDQFMENPLL--SATRGMGASGARRGWDIKEKDDALYLRIDMPGLSREDVKLALEQDTLVIRGEGKNEEDGGEEGESGNRRFTSRIGLPDKIYKIDEIKAEMKNGVLKVVIPKMKEQER 201
BLAST of CN186574 vs. ExPASy Swiss-Prot
Match: HS235_ARATH (23.5 kDa heat shock protein, mitochondrial OS=Arabidopsis thaliana GN=HSP23.5 PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.723e-15 Identity = 48/134 (35.82%), Postives = 76/134 (56.72%), Query Frame = -3 Query: 133 LMDPSFPTRTMRQMLDTMDRLLEDTMAFPGRSRAGGGGQVRTPWDIKEEENEIKMRFDMPGLFXXXXXXXXXXXXXVIKGEHRAEEAGGASFSS--YDTRLQLPDNCEK-DKVKAELKNGVLYISIPKTKVERK 525 ++DP PTR++ QML+ MD++ E + +R G VR W++KE+++ + +R DMPGL VI+GE EE S + +R++LP+ K D++KAE+KNGVL + IPK K + + Sbjct: 70 ILDPFTPTRSLSQMLNFMDQVSEIPLV--SATRGMGASGVRRGWNVKEKDDALHLRIDMPGLSREDVKLALEQNTLVIRGEGETEEGEDVSGDGRRFTSRIELPEKVYKTDEIKAEMKNGVLKVVIPKIKEDER 201
BLAST of CN186574 vs. ExPASy Swiss-Prot
Match: HS23C_CHERU (Small heat shock protein, chloroplastic OS=Chenopodium rubrum GN=HSP23 PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 8.552e-15 Identity = 46/139 (33.09%), Postives = 74/139 (53.24%), Query Frame = -3 Query: 112 LMDPSFPTRTMRQMLDTMDRLLEDTMAFPGRSRAGGGGQVRTPWDIKEEENEIKMRFDMPGLFXXXXXXXXXXXXXVIKGEHRAEEAGGASFSSYDTRLQLPDNCEK-DKVKAELKNGVLYISIPKTKVERKVIDVQIL 525 + DP TR++ Q+++ MD+L+E+ R G G +R WD++E+E ++++ DMPGL +IK E E Y +R++L N K D +KAE+KNGVL +++PK K E K Q++ Sbjct: 67 VFDPFRATRSVGQLMNLMDQLMENPFMAASR---GSGRAMRRGWDVREDEEALELKVDMPGLAKEDVKVSVEDNTLIIKSEAEKETEEEEQRRRYSSRIELTPNLYKIDGIKAEMKNGVLKVTVPKIKEEEKKDVFQVM 202 The following BLAST results are available for this feature:
BLAST of CN186574 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 13
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Sequences
The
following sequences are available for this feature:
EST sequence >CN186574 ID=CN186574; Name=CN186574; organism=Citrus sinensis; type=EST; length=656bpback to top |