CN186555
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN186555 vs. ExPASy Swiss-Prot
Match: AGD14_ARATH (Probable ADP-ribosylation factor GTPase-activating protein AGD14 OS=Arabidopsis thaliana GN=AGD14 PE=1 SV=2) HSP 1 Score: 226.098 bits (575), Expect = 1.279e-58 Identity = 108/147 (73.47%), Postives = 117/147 (79.59%), Query Frame = 1 Query: 175 MGSXXXXXXXXXXXXGLMKLPPNRRCINCNSLGPQYVCTNFWTFVCMTCSGIHREFTHRVKSVSMSKFTSQEVEALQNGGNQRAREIYLKDWDFQRQRLPDNSNVNKVRDFIKNVYVDRRYAGGKTPDKPPKDTQGLGSHLDESRRA 615 MGS GLMKLPPNRRCINCNSLGPQYVCT FWTFVCM CSGIHREFTHRVKSVSMSKFTS+EVE LQNGGNQRAREIYLK+WD QRQRLP+NSN +VR+FIKNVYV ++YAG DKP KD+Q S D +RRA Sbjct: 2 MGSKREEERNEKIIRGLMKLPPNRRCINCNSLGPQYVCTTFWTFVCMACSGIHREFTHRVKSVSMSKFTSKEVEVLQNGGNQRAREIYLKNWDHQRQRLPENSNAERVREFIKNVYVQKKYAGANDADKPSKDSQDHVSSEDMTRRA 148
BLAST of CN186555 vs. ExPASy Swiss-Prot
Match: AGFG1_RAT (Arf-GAP domain and FG repeats-containing protein 1 OS=Rattus norvegicus GN=Agfg1 PE=1 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 4.162e-17 Identity = 43/104 (41.35%), Postives = 65/104 (62.50%), Query Frame = 1 Query: 232 LPPNRRCINCNSLGPQYVCTNFWTFVCMTCSGIHREFT--HRVKSVSMSKFTSQEVEALQNGGNQRAREIYLKDWDFQRQRLPDNSNVNKVRDFIKNVYVDRRY 537 LP NR+C +C+ GP YV +FVC +CSG R HRVKS+SM+ FT QE+E LQ GN+ ++I+L +D + +PD + KV++F++ Y +R+ Sbjct: 23 LPHNRKCFDCDQRGPTYVNMTVGSFVCTSCSGSLRGLNPPHRVKSISMTTFTQQEIEFLQKHGNEVCKQIWLGLFDDRSSAIPDFRDPQKVKEFLQEKYEKKRW 126
BLAST of CN186555 vs. ExPASy Swiss-Prot
Match: AGFG1_MOUSE (Arf-GAP domain and FG repeats-containing protein 1 OS=Mus musculus GN=Agfg1 PE=1 SV=2) HSP 1 Score: 88.1965 bits (217), Expect = 4.162e-17 Identity = 43/104 (41.35%), Postives = 65/104 (62.50%), Query Frame = 1 Query: 232 LPPNRRCINCNSLGPQYVCTNFWTFVCMTCSGIHREFT--HRVKSVSMSKFTSQEVEALQNGGNQRAREIYLKDWDFQRQRLPDNSNVNKVRDFIKNVYVDRRY 537 LP NR+C +C+ GP YV +FVC +CSG R HRVKS+SM+ FT QE+E LQ GN+ ++I+L +D + +PD + KV++F++ Y +R+ Sbjct: 23 LPHNRKCFDCDQRGPTYVNMTVGSFVCTSCSGSLRGLNPPHRVKSISMTTFTQQEIEFLQKHGNEVCKQIWLGLFDDRSSAIPDFRDPQKVKEFLQEKYEKKRW 126
BLAST of CN186555 vs. ExPASy Swiss-Prot
Match: AGFG1_HUMAN (Arf-GAP domain and FG repeats-containing protein 1 OS=Homo sapiens GN=AGFG1 PE=1 SV=2) HSP 1 Score: 88.1965 bits (217), Expect = 4.162e-17 Identity = 43/104 (41.35%), Postives = 65/104 (62.50%), Query Frame = 1 Query: 232 LPPNRRCINCNSLGPQYVCTNFWTFVCMTCSGIHREFT--HRVKSVSMSKFTSQEVEALQNGGNQRAREIYLKDWDFQRQRLPDNSNVNKVRDFIKNVYVDRRY 537 LP NR+C +C+ GP YV +FVC +CSG R HRVKS+SM+ FT QE+E LQ GN+ ++I+L +D + +PD + KV++F++ Y +R+ Sbjct: 23 LPHNRKCFDCDQRGPTYVNMTVGSFVCTSCSGSLRGLNPPHRVKSISMTTFTQQEIEFLQKHGNEVCKQIWLGLFDDRSSAIPDFRDPQKVKEFLQEKYEKKRW 126
BLAST of CN186555 vs. ExPASy Swiss-Prot
Match: AGFG1_BOVIN (Arf-GAP domain and FG repeats-containing protein 1 OS=Bos taurus GN=AGFG1 PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 4.162e-17 Identity = 43/104 (41.35%), Postives = 65/104 (62.50%), Query Frame = 1 Query: 232 LPPNRRCINCNSLGPQYVCTNFWTFVCMTCSGIHREFT--HRVKSVSMSKFTSQEVEALQNGGNQRAREIYLKDWDFQRQRLPDNSNVNKVRDFIKNVYVDRRY 537 LP NR+C +C+ GP YV +FVC +CSG R HRVKS+SM+ FT QE+E LQ GN+ ++I+L +D + +PD + KV++F++ Y +R+ Sbjct: 23 LPHNRKCFDCDQRGPTYVNMTVGSFVCTSCSGSLRGLNPPHRVKSISMTTFTQQEIEFLQKHGNEVCKQIWLGLFDDRSSAIPDFRDPQKVKEFLQEKYEKKRW 126
BLAST of CN186555 vs. ExPASy Swiss-Prot
Match: AGFG2_HUMAN (Arf-GAP domain and FG repeats-containing protein 2 OS=Homo sapiens GN=AGFG2 PE=1 SV=2) HSP 1 Score: 82.4185 bits (202), Expect = 2.284e-15 Identity = 46/119 (38.66%), Postives = 66/119 (55.46%), Query Frame = 1 Query: 241 NRRCINCNSLGPQYVCTNFWTFVCMTCSGIHREFT--HRVKSVSMSKFTSQEVEALQNGGNQRAREIYLKDWDFQRQRLPDNSNVNKVRDFIKNVYVDRRYAGGKTPDKPPKDTQGLGS 591 NR C C G YV +FVC TCSG+ R HRVKS+SM+ FT EV LQ+ GN+ R+I+L +D + +PD+ + KV++F++ Y +R+ K P T+G S Sbjct: 44 NRHCFECAQRGVTYVDITVGSFVCTTCSGLLRGLNPPHRVKSISMTTFTEPEVVFLQSRGNEVCRKIWLGLFDARTSLVPDSRDPQKVKEFLQEKYEKKRWYVPPDQVKGPTYTKGSAS 162
BLAST of CN186555 vs. ExPASy Swiss-Prot
Match: AGFG2_MOUSE (Arf-GAP domain and FG repeats-containing protein 2 OS=Mus musculus GN=Agfg2 PE=1 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 8.677e-15 Identity = 44/116 (37.93%), Postives = 65/116 (56.03%), Query Frame = 1 Query: 241 NRRCINCNSLGPQYVCTNFWTFVCMTCSGIHREFT--HRVKSVSMSKFTSQEVEALQNGGNQRAREIYLKDWDFQRQRLPDNSNVNKVRDFIKNVYVDRRYAGGKTPDKPPKDTQG 582 NR C C G YV +FVC TCSG+ R HRVKS+SM+ FT EV LQ+ GN+ R+I+L +D + +PD+ + KV++F++ Y +R+ K P ++G Sbjct: 44 NRHCFECAQRGVTYVDITVGSFVCTTCSGLLRGLNPPHRVKSISMTTFTEPEVLFLQSRGNEVCRKIWLGLFDARTSLIPDSRDPQKVKEFLQEKYEKKRWYVPPEQVKGPSYSKG 159
BLAST of CN186555 vs. ExPASy Swiss-Prot
Match: AGD5_ARATH (Probable ADP-ribosylation factor GTPase-activating protein AGD5 OS=Arabidopsis thaliana GN=AGD5 PE=1 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.086e-12 Identity = 39/124 (31.45%), Postives = 66/124 (53.23%), Query Frame = 1 Query: 220 GLMKLPPNRRCINCNSLGPQYVCTNFWTFVCMTCSGIHREF---THRVKSVSMSKFTSQEVEALQNGGNQRAREIYLKDWDFQRQRLPDNSNVNKVRDFIKNVYVDRRYAG-GKTPDKPPKDTQ 579 GL+K P NR C +C + GP++ N F+CM CSGIHR +V+S ++ + ++V +Q+ GN +A W+ + LP N + + +FI+ Y ++R+ G+ PP+ Q Sbjct: 21 GLLKHPENRECADCKTKGPRWASVNLGIFICMQCSGIHRSLGVHISKVRSATLDTWLPEQVAFIQSMGNDKANSY----WEAE---LPPNYDRVGIENFIRAKYEEKRWVSRGEKARSPPRVEQ 137 The following BLAST results are available for this feature:
BLAST of CN186555 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN186555 ID=CN186555; Name=CN186555; organism=Citrus sinensis; type=EST; length=664bpback to top |