CN186552

Overview
NameCN186552
Unique NameCN186552
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length666
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN186552 vs. ExPASy Swiss-Prot
Match: CDPK8_ARATH (Calcium-dependent protein kinase 8 OS=Arabidopsis thaliana GN=CPK8 PE=1 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.805e-20
Identity = 49/56 (87.50%), Postives = 50/56 (89.29%), Query Frame = -2
Query:  351 AIMHDVDTDKDGRISYEEFAVMMKAGPDWRKASRQYSPERFNSISLKLMREEGLQL 518
            AIM DVDTDKDGRISYEEFA MMKAG DWRKASRQYS ERFNS+SLKLMRE  LQL
Sbjct:  474 AIMQDVDTDKDGRISYEEFAAMMKAGTDWRKASRQYSRERFNSLSLKLMREGSLQL 529          
BLAST of CN186552 vs. ExPASy Swiss-Prot
Match: CDPK7_ARATH (Calcium-dependent protein kinase 7 OS=Arabidopsis thaliana GN=CPK7 PE=1 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.170e-19
Identity = 47/56 (83.93%), Postives = 49/56 (87.50%), Query Frame = -2
Query:  351 AIMHDVDTDKDGRISYEEFAVMMKAGPDWRKASRQYSPERFNSISLKLMREEGLQL 518
            AIM DVDTDKDGRISYEEF  MMKAG DWRKASRQYS ERFNS+SLKLMR+  LQL
Sbjct:  476 AIMQDVDTDKDGRISYEEFVAMMKAGTDWRKASRQYSRERFNSLSLKLMRDGSLQL 531          
BLAST of CN186552 vs. ExPASy Swiss-Prot
Match: CDPKW_ARATH (Calcium-dependent protein kinase 32 OS=Arabidopsis thaliana GN=CPK32 PE=1 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.207e-18
Identity = 44/57 (77.19%), Postives = 49/57 (85.96%), Query Frame = -2
Query:  351 NAIMHDVDTDKDGRISYEEFAVMMKAGPDWRKASRQYSPERFNSISLKLMREEGLQL 521
            +AI+ DVDTDKDGRISYEEF  MMK G DWRKASRQYS ERFNSISLKLM++  LQ+
Sbjct:  477 DAIIRDVDTDKDGRISYEEFVTMMKTGTDWRKASRQYSRERFNSISLKLMQDASLQV 533          
BLAST of CN186552 vs. ExPASy Swiss-Prot
Match: CDPKD_ARATH (Calcium-dependent protein kinase 13 OS=Arabidopsis thaliana GN=CPK13 PE=1 SV=2)

HSP 1 Score: 87.0409 bits (214), Expect = 9.271e-17
Identity = 41/59 (69.49%), Postives = 46/59 (77.97%), Query Frame = -2
Query:  345 NAIMHDVDTDKDGRISYEEFAVMMKAGPDWRKASRQYSPERFNSISLKLMREEGLQLAN 521
            N I  +VDTDKDGRISYEEFA MMK G DWRKASR YS  RFNS+S+KLM++  L L N
Sbjct:  469 NDIFQEVDTDKDGRISYEEFAAMMKTGTDWRKASRHYSRGRFNSLSIKLMKDGSLNLGN 527          
BLAST of CN186552 vs. ExPASy Swiss-Prot
Match: CDPKU_ARATH (Calcium-dependent protein kinase 30 OS=Arabidopsis thaliana GN=CPK30 PE=1 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.025e-15
Identity = 38/55 (69.09%), Postives = 46/55 (83.64%), Query Frame = -2
Query:  351 IMHDVDTDKDGRISYEEFAVMMKAGPDWRKASRQYSPERFNSISLKLMREEGLQL 515
            IM +VDTDKDG+I+Y+EF VMMKAG DWRKASRQYS ERF S+SL LM++  + L
Sbjct:  476 IMREVDTDKDGKINYDEFVVMMKAGTDWRKASRQYSRERFKSLSLNLMKDGSMHL 530          
BLAST of CN186552 vs. ExPASy Swiss-Prot
Match: CDPKA_ARATH (Calcium-dependent protein kinase 10 OS=Arabidopsis thaliana GN=CPK10 PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.339e-15
Identity = 38/55 (69.09%), Postives = 45/55 (81.82%), Query Frame = -2
Query:  351 IMHDVDTDKDGRISYEEFAVMMKAGPDWRKASRQYSPERFNSISLKLMREEGLQL 515
            IM +VDTDKDGRI+Y+EF  MMKAG DWRKASRQYS ERF S+S+ LM++  L L
Sbjct:  480 IMREVDTDKDGRINYDEFVTMMKAGTDWRKASRQYSRERFKSLSINLMKDGSLHL 534          
BLAST of CN186552 vs. ExPASy Swiss-Prot
Match: CDPKE_ARATH (Calcium-dependent protein kinase 14 OS=Arabidopsis thaliana GN=CPK14 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.297e-14
Identity = 37/55 (67.27%), Postives = 45/55 (81.82%), Query Frame = -2
Query:  354 AIMHDVDTDKDGRISYEEFAVMMKAGPDWRKASRQYSPERFNSISLKLMREEGLQ 518
            AI+ DVDT+KDG+ISY+EFA MMK G DWRKASRQYS + F  +SLKLM++  LQ
Sbjct:  470 AIILDVDTNKDGKISYDEFATMMKTGTDWRKASRQYSRDLFKCLSLKLMQDGSLQ 524          
The following BLAST results are available for this feature:
BLAST of CN186552 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
CDPK8_ARATH1.805e-2087.50Calcium-dependent protein kinase 8 OS=Arabidopsis ... [more]
CDPK7_ARATH1.170e-1983.93Calcium-dependent protein kinase 7 OS=Arabidopsis ... [more]
CDPKW_ARATH2.207e-1877.19Calcium-dependent protein kinase 32 OS=Arabidopsis... [more]
CDPKD_ARATH9.271e-1769.49Calcium-dependent protein kinase 13 OS=Arabidopsis... [more]
CDPKU_ARATH1.025e-1569.09Calcium-dependent protein kinase 30 OS=Arabidopsis... [more]
CDPKA_ARATH1.339e-1569.09Calcium-dependent protein kinase 10 OS=Arabidopsis... [more]
CDPKE_ARATH3.297e-1467.27Calcium-dependent protein kinase 14 OS=Arabidopsis... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS05_0003B11_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0003B11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186552 ID=CN186552; Name=CN186552; organism=Citrus sinensis; type=EST; length=666bp
TTTTTTTTTTTTTTTTTAGACAAACCAATGTTTATTCCCTTTAAAGAGGA
CAAATTGCATATGTACAACCACAAAAGTGCTCCACAATAACAACCTTTGG
AACTCTCTTAGGAACTCTTTTTTTCCTTCTGCAGATAATAGACAAATTCT
AAACACAGCCAATTAAGATACTAATAAGATCACTCCACCGGGATCCGACC
TATGCAAAGACATAAATCAGAGAATAAATAAAATAACAATAATCTTGTGT
AAACTTAACAAAAATAAAACAATTTTACTTTTTCTTAGAAGTGAATTTCT
CGATATGCTAGCCCGTCGGATAACTTTCAGTTCTTTTACCCTCAGTTGGC
TAACTGTAAACCCTCCTCCCTCATTAACTTCAAGCTTATACTGTTGAATC
TTTCCGGGGAATATTGCCTTGACGCCTTTCTCCAATCAGGACCTGCCTTC
ATCATCACGGCAAACTCCTCGTAACTTATGCGACCATCCTTGTCCGTATC
AACATCATGCATAATGGCATTGAAAGACATAAAATCTTTATTAAAAGTGA
TAATAATAAGAAAATAAGAATGTAACATTGCCTTTAGACTGCCTATAGGA
CATTTTTAACATAGAAATGTTTATATAACATAATTTATTATCACATAAAT
TATTTGGATCCTGCCG
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