CN186543

Overview
NameCN186543
Unique NameCN186543
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length710
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN186543 vs. ExPASy Swiss-Prot
Match: OAT_DICDI (Probable ornithine aminotransferase OS=Dictyostelium discoideum GN=oatA PE=3 SV=1)

HSP 1 Score: 241.891 bits (616), Expect = 2.565e-63
Identity = 108/191 (56.54%), Postives = 143/191 (74.87%), Query Frame = 1
Query:  136 LINLEYEYSAHNYHPVPIVFSQAKGSSIWDPEGNKYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLTLSSRAFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEP 708
            LI +E E++AH YHP+P+VF +A G  +WD E  +Y DFLSAYSAVNQGH HPKI+ AL  QA+K  LSSRAFYN+ FP +A+ +T  FGY+MVLPMNTGAE VET++KLAR+WGYVKK  + D+AI++SC GCFHGRT+  ISMS D  +   +GPL+ G +K+D+     LE++  +  D++ GF+ EP
Sbjct:   16 LIEMESEFAAHTYHPIPVVFKKASGVHVWDVEEKQYFDFLSAYSAVNQGHSHPKIVSALITQAQKCALSSRAFYNEVFPQYAKYITEYFGYEMVLPMNTGAEAVETSIKLARRWGYVKKGIAEDQAIVISCKGCFHGRTIGVISMSDDPSSYNKYGPLMNGIIKIDYNSTQQLEEVLSQHADRVCGFIVEP 206          
BLAST of CN186543 vs. ExPASy Swiss-Prot
Match: OAT_EMENI (Ornithine aminotransferase OS=Emericella nidulans GN=otaA PE=3 SV=2)

HSP 1 Score: 236.884 bits (603), Expect = 8.250e-62
Identity = 113/198 (57.07%), Postives = 145/198 (73.23%), Query Frame = 1
Query:  139 INLEYEYSAHNYHPVPIVFSQAKGSSIWDPEGNKYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLTLSSRAFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG--------HLKVDFGDITALEKIFKESGDQIAGFLFEP 708
            I  E +++AHNYHP+P+VF++A+G+S+WDPEG  YLDFLSAYSAVNQGHCHPK++ AL +QA +LTLSSRAFYND FP FAE +T  FG+DMVLPMNTGAE VET +K+ARKWGY  K    +EAII+S    FHGRT+AAIS+S D E+   +GP +P            + + D  AL + F+++G  +A FL EP
Sbjct:   22 IQAENDFAAHNYHPLPVVFARAQGTSVWDPEGRHYLDFLSAYSAVNQGHCHPKLVAALVDQASRLTLSSRAFYNDVFPKFAEMVTKYFGFDMVLPMNTGAEAVETGIKIARKWGYKVKGIPENEAIILSAENNFHGRTMAAISLSSDPESRENYGPYVPNIGCTIPGTEKPITYNDKAALREAFEKAGSNLAAFLVEP 219          
BLAST of CN186543 vs. ExPASy Swiss-Prot
Match: OAT_SCHPO (Probable ornithine aminotransferase OS=Schizosaccharomyces pombe GN=SPBC21C3.08c PE=2 SV=1)

HSP 1 Score: 236.498 bits (602), Expect = 1.078e-61
Identity = 116/196 (59.18%), Postives = 142/196 (72.45%), Query Frame = 1
Query:  145 LEYEYSAHNYHPVPIVFSQAKGSSIWDPEGNKYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLTLSSRAFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLP--------GHLKVDFGDITALEKIFKESGDQIAGFLFEP 708
            LE EY+AHNYHP+P+ FS+AKG+ +WDPEG +YLDFLSAYSAVNQGHCHPKI++AL EQA+++TLSSRAFYNDKF  FA+ +T  FGY+MV+PMNTGAE VETA KLAR WGY  KK   DEAII+SC   FHGRT+  ISMS D +A   +GP LP            + + +I  L+      G ++A FL EP
Sbjct:   19 LENEYAAHNYHPLPVCFSKAKGAKVWDPEGREYLDFLSAYSAVNQGHCHPKIIEALVEQAQRVTLSSRAFYNDKFGPFAKYITEYFGYEMVIPMNTGAEAVETACKLARLWGYKAKKIPTDEAIILSCVDNFHGRTMGIISMSTDPDARDNYGPYLPNVGPKISGADRVLRYNNIEDLKYYLDTFGPKVAAFLVEP 214          
BLAST of CN186543 vs. ExPASy Swiss-Prot
Match: OAT_YEAST (Ornithine aminotransferase OS=Saccharomyces cerevisiae GN=CAR2 PE=1 SV=2)

HSP 1 Score: 218.779 bits (556), Expect = 2.325e-56
Identity = 113/198 (57.07%), Postives = 139/198 (70.20%), Query Frame = 1
Query:  139 INLEYEYSAHNYHPVPIVFSQAKGSSIWDPEGNKYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLTLSSRAFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIR-GFGPLLP----GHL--KVDFGDITALEKIFKE-SGDQIAGFLFEP 708
            I  E +YSAHNYHP+P+VF +AKG+ +WDPEG  YLDFLSAYSAVNQGHCHP I+KAL EQA+ LTLSSRAF+ND +  FA+ +T  FG++ VLPMNTGAE VETALKLAR+WGY+KK    D+AII+   G FHGRT  AIS+S D E  +  FGP +P    GH   K+ +G       I +   G  +A  + EP
Sbjct:   12 IEWENKYSAHNYHPLPVVFHKAKGAHVWDPEGKLYLDFLSAYSAVNQGHCHPHIIKALTEQAQTLTLSSRAFHNDVYAQFAKFVTEFFGFETVLPMNTGAEAVETALKLARRWGYMKKNIPQDKAIILGAEGNFHGRTFGAISLSTDYEDSKLHFGPFVPNVASGHSVHKIRYGHAEDFVPILESPEGKNVAAIILEP 209          
BLAST of CN186543 vs. ExPASy Swiss-Prot
Match: OAT_EXISA (Ornithine aminotransferase OS=Exiguobacterium sp. (strain ATCC BAA-1283 / AT1b) GN=rocD PE=3 SV=1)

HSP 1 Score: 215.698 bits (548), Expect = 1.968e-55
Identity = 108/191 (56.54%), Postives = 139/191 (72.77%), Query Frame = 1
Query:  136 LINLEYEYSAHNYHPVPIVFSQAKGSSIWDPEGNKYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLTLSSRAFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEP 708
            +I L  ++ AHNYHP+PIV S+AKG  + DPEGN+Y+D LSAYSAVNQGHCHPKI++AL++QA+K+TL+SRAFYND+   F +++ ++    MVLPMNTGAE VETA+K AR+W Y  K     +A I+ C G FHGRT+AA+SMS + E  RGFGPLLPG   V +GDI A E    E+    A F+ EP
Sbjct:    7 VIELTEKFGAHNYHPLPIVISEAKGIWVTDPEGNRYMDMLSAYSAVNQGHCHPKIIQALKDQADKITLTSRAFYNDQLGRFYDKVVTLTKKQMVLPMNTGAEAVETAVKTARRWAYDVKGIP-GQAEIIVCSGNFHGRTMAAVSMSTEAEYQRGFGPLLPGFKVVPYGDIDAFEAAITEN---TAAFIVEP 193          
BLAST of CN186543 vs. ExPASy Swiss-Prot
Match: OAT_DROAN (Ornithine aminotransferase, mitochondrial OS=Drosophila ananassae GN=Oat PE=1 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 1.276e-54
Identity = 100/187 (53.48%), Postives = 133/187 (71.12%), Query Frame = 1
Query:  148 EYEYSAHNYHPVPIVFSQAKGSSIWDPEGNKYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLTLSSRAFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEP 708
            E +Y AHNYHP+P+  S+ +G  +WD EG +Y D+LSAYSAVNQGHCHPKI+KAL EQA KL L+SRAFY+D    + E +T +FG+D VLPMNTG EG ETA KLARKWGY++KK   ++A I+     F GRTL+A+S S D  +  GFGP +PG   +++ ++TALE+  K+    +  F+ EP
Sbjct:   42 ENKYGAHNYHPLPVALSKGEGVFVWDVEGKRYFDYLSAYSAVNQGHCHPKIVKALTEQASKLALTSRAFYSDVLGEYEEYVTKLFGFDKVLPMNTGVEGGETACKLARKWGYLQKKIPENQAKIIFARNNFWGRTLSAVSASNDPSSYEGFGPFMPGFELIEYDNVTALEEALKD--PNVCAFMVEP 226          
BLAST of CN186543 vs. ExPASy Swiss-Prot
Match: OAT_GEOSW (Ornithine aminotransferase OS=Geobacillus sp. (strain WCH70) GN=rocD PE=3 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 1.080e-53
Identity = 102/191 (53.40%), Postives = 138/191 (72.25%), Query Frame = 1
Query:  136 LINLEYEYSAHNYHPVPIVFSQAKGSSIWDPEGNKYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLTLSSRAFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEP 708
            +I L  +Y A+NYHP+P+V ++ +G  + DPEGN+Y+D LSAYSAVNQGH HPKI++AL+EQA+++TL+SRAF+ND+   + E++  + G DMVLPMNTGAE VETA K AR+W Y  K    D+A I+ C   FHGRT+AA+SMS   E  RGFGP+LPG   + +GD+ AL+K    +    A F+FEP
Sbjct:    7 IIRLTEQYGANNYHPLPVVLTKGEGVWVEDPEGNRYMDMLSAYSAVNQGHRHPKIIQALKEQADRITLTSRAFHNDQLGPWYEKVAKLTGKDMVLPMNTGAEAVETAFKAARRWAYDVKGVEKDKAEIIVCENNFHGRTMAAVSMSSSEEYKRGFGPMLPGIKIIPYGDVEALKKAITPN---TAAFIFEP 194          
BLAST of CN186543 vs. ExPASy Swiss-Prot
Match: OAT_BACSU (Ornithine aminotransferase OS=Bacillus subtilis GN=rocD PE=2 SV=2)

HSP 1 Score: 209.149 bits (531), Expect = 1.842e-53
Identity = 100/191 (52.36%), Postives = 140/191 (73.30%), Query Frame = 1
Query:  136 LINLEYEYSAHNYHPVPIVFSQAKGSSIWDPEGNKYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLTLSSRAFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEP 708
            +I+    Y A+NYHP+PIV S+A G+ + DPEGN+Y+D LSAYSAVNQGH HPKI++AL++QA+K+TL+SRAF+ND+   F E+   + G +M+LPMNTGAE VE+A+K AR+W Y  K  + ++A I++C G FHGRT+ A+S+S + E  RGFGP+LPG   + +GD+ AL +    +    A FLFEP
Sbjct:   10 IIDQTSHYGANNYHPLPIVISEALGAWVKDPEGNEYMDMLSAYSAVNQGHRHPKIIQALKDQADKITLTSRAFHNDQLGPFYEKTAKLTGKEMILPMNTGAEAVESAVKAARRWAYEVKGVADNQAEIIACVGNFHGRTMLAVSLSSEEEYKRGFGPMLPGIKLIPYGDVEALRQAITPN---TAAFLFEP 197          
BLAST of CN186543 vs. ExPASy Swiss-Prot
Match: OAT_BACHD (Ornithine aminotransferase OS=Bacillus halodurans GN=rocD PE=3 SV=2)

HSP 1 Score: 206.838 bits (525), Expect = 9.143e-53
Identity = 101/185 (54.59%), Postives = 135/185 (72.97%), Query Frame = 1
Query:  154 EYSAHNYHPVPIVFSQAKGSSIWDPEGNKYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLTLSSRAFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEP 708
            +Y A NYHP+PIV S+AKG  + DPEG KYLD LSAYSAVNQGHCHPKI++AL++QA+K+TL+SRAF+ND+   F E+++ + G +M+LPMNTGAE VETA+K AR+W Y  K    ++A I+ C   FHGRT+ A+S+S ++E  RGFGP+LPG   + +GD+ AL+          A FL EP
Sbjct:   14 KYGAKNYHPLPIVISEAKGVWVKDPEGRKYLDMLSAYSAVNQGHCHPKIIQALKDQADKITLTSRAFHNDQLAPFYEKVSKLTGKNMLLPMNTGAEAVETAVKAARRWAYDVKGVPDNQAEIIVCEDNFHGRTMTAVSLSSNDEYKRGFGPMLPGIKVIPYGDLEALKAAIT---SHTAAFLVEP 195          
BLAST of CN186543 vs. ExPASy Swiss-Prot
Match: OAT_HUMAN (Ornithine aminotransferase, mitochondrial OS=Homo sapiens GN=OAT PE=1 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 1.560e-52
Identity = 100/187 (53.48%), Postives = 126/187 (67.38%), Query Frame = 1
Query:  148 EYEYSAHNYHPVPIVFSQAKGSSIWDPEGNKYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLTLSSRAFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEP 708
            EY+Y AHNYHP+P+   + KG  +WD EG KY DFLS+YSAVNQGHCHPKI+ AL+ Q +KLTL+SRAFYN+    + E +T +F Y  VLPMNTG E  ETA KLARKWGY  K     +A IV   G F GRTL+AIS S D  +  GFGP +PG   + + D+ ALE+  ++    +A F+ EP
Sbjct:   47 EYKYGAHNYHPLPVALERGKGIYLWDVEGRKYFDFLSSYSAVNQGHCHPKIVNALKSQVDKLTLTSRAFYNNVLGEYEEYITKLFNYHKVLPMNTGVEAGETACKLARKWGYTVKGIQKYKAKIVFAAGNFWGRTLSAISSSTDPTSYDGFGPFMPGFDIIPYNDLPALERALQD--PNVAAFMVEP 231          
The following BLAST results are available for this feature:
BLAST of CN186543 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 459
Match NameE-valueIdentityDescription
OAT_DICDI2.565e-6356.54Probable ornithine aminotransferase OS=Dictyosteli... [more]
OAT_EMENI8.250e-6257.07Ornithine aminotransferase OS=Emericella nidulans ... [more]
OAT_SCHPO1.078e-6159.18Probable ornithine aminotransferase OS=Schizosacch... [more]
OAT_YEAST2.325e-5657.07Ornithine aminotransferase OS=Saccharomyces cerevi... [more]
OAT_EXISA1.968e-5556.54Ornithine aminotransferase OS=Exiguobacterium sp. ... [more]
OAT_DROAN1.276e-5453.48Ornithine aminotransferase, mitochondrial OS=Droso... [more]
OAT_GEOSW1.080e-5353.40Ornithine aminotransferase OS=Geobacillus sp. (str... [more]
OAT_BACSU1.842e-5352.36Ornithine aminotransferase OS=Bacillus subtilis GN... [more]
OAT_BACHD9.143e-5354.59Ornithine aminotransferase OS=Bacillus halodurans ... [more]
OAT_HUMAN1.560e-5253.48Ornithine aminotransferase, mitochondrial OS=Homo ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0003B05_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0003B05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186543 ID=CN186543; Name=CN186543; organism=Citrus sinensis; type=EST; length=710bp
AGTATTGTTATTATGAATTCAATGGGTGCAACAAGAAGAAATTTGCATTG
CTTATTGAGCAGAGTATGCAGGAAGAGAAGTTATGGTGCTCAACCTCAAG
GAGGCACTTCTCCTTCTTCTTCTTCTTCTCAACAACTCATCAATTTGGAG
TATGAATACAGTGCCCACAATTACCACCCAGTTCCGATTGTATTCTCTCA
AGCAAAAGGGTCATCCATATGGGATCCAGAGGGCAATAAATATCTGGATT
TTCTCTCAGCTTACTCTGCAGTTAATCAGGGACATTGTCATCCAAAAATC
ATGAAAGCATTACAAGAGCAGGCAGAAAAGCTTACTCTCAGCTCTAGAGC
CTTCTATAATGATAAATTTCCAGTATTTGCAGAGCGTCTAACAAGCATGT
TTGGGTATGATATGGTACTACCTATGAACACCGGTGCCGAAGGTGTGGAG
ACAGCTCTGAAGTTGGCTAGGAAATGGGGTTACGTGAAGAAAAAATTTTC
CATAGATGAGGCTATCATTGTTTCTTGTTGTGGCTGCTTCCATGGTCGTA
CATTGGCTGCCATTTCTATGAGCTGTGACAATGAGGCCATTCGTGGTTTT
GGACCATTGTTACCTGGCCATCTTAAGGTTGATTTTGGTGATATAACTGC
TCTAGAGAAAATCTTTAAAGAAAGTGGAGATCAAATAGCTGGATTTCTTT
TTGAACCAAT
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