CN186513

Overview
NameCN186513
Unique NameCN186513
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length642
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6963 contig Csv1_Contig6963:288..929. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN186513 vs. ExPASy Swiss-Prot
Match: ILL6_ORYSJ (IAA-amino acid hydrolase ILR1-like 6 OS=Oryza sativa subsp. japonica GN=ILL6 PE=2 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 5.416e-43
Identity = 85/117 (72.65%), Postives = 93/117 (79.49%), Query Frame = -3
Query:  290 VFVEQARVFRCSATVDFFDKGNSVYPPPVNDEDMYEHVKKVAIDLLGLTNYRVVPPMMGAEDFSFYSEVVPAAFYYIGIKNETLGSIHTGHSPYFMIDEDVLPVGAAVHATIAERFL 640
            V   QARV  C A VDFF+   S YPP VND  MY HVK VA +LLG  +YR VPPMMGAEDFSFYS+VVPA FYYIG++NETLGS+HTGHSPYFMIDEDVLP GAA HA IAER+L
Sbjct:  372 VITAQARVHGCEAAVDFFEN-QSFYPPTVNDARMYAHVKAVAGELLGAGSYRDVPPMMGAEDFSFYSQVVPAGFYYIGVRNETLGSVHTGHSPYFMIDEDVLPTGAAFHAAIAERYL 487          
BLAST of CN186513 vs. ExPASy Swiss-Prot
Match: ILL6_ARATH (IAA-amino acid hydrolase ILR1-like 6 OS=Arabidopsis thaliana GN=ILL6 PE=2 SV=2)

HSP 1 Score: 170.244 bits (430), Expect = 7.820e-42
Identity = 75/119 (63.03%), Postives = 98/119 (82.35%), Query Frame = -3
Query:  284 VFVEQARVFRCSATVDFFDKGNSVYPPPVNDEDMYEHVKKVAIDLLGLTNYRVVPPMMGAEDFSFYSEVVPAAFYYIGIKNETLGSIHTGHSPYFMIDEDVLPVGAAVHATIAERFLNE 640
            V ++Q  VF C ATV+FF+K N++YPP  N++  Y H+KKV IDLLG +++ + P MMGAEDF+FYSE++PAAFY+IGI+NE LGS+H  HSP+FMIDED LPVGAAVHA +AER+LN+
Sbjct:  343 VLMDQVGVFGCQATVNFFEKQNAIYPPTTNNDATYNHLKKVTIDLLGDSHFTLAPQMMGAEDFAFYSEIIPAAFYFIGIRNEELGSVHIAHSPHFMIDEDSLPVGAAVHAAVAERYLND 461          
BLAST of CN186513 vs. ExPASy Swiss-Prot
Match: ILL7_ORYSJ (IAA-amino acid hydrolase ILR1-like 7 OS=Oryza sativa subsp. japonica GN=ILL7 PE=2 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 1.998e-29
Identity = 60/116 (51.72%), Postives = 84/116 (72.41%), Query Frame = -3
Query:  281 ARVFRCSATVDFFDKGNSVYPPPVNDEDMYEHVKKVAIDLLGLTNYRVVPPMMGAEDFSFYSEVVPAAFYYIGIKNE-TLGSIHTGHSPYFMIDEDVLPVGAAVHATIAERFLNEY 625
            A V RC+ATVDF ++    YP  VNDE MY H + VA+D+LG    +V  P MG+EDF+FY++  PAAF+ IG+ NE T+  ++  HSP+F++DEDVLPVGAA+HA +A  +LN++
Sbjct:  334 ATVHRCTATVDFMEEERIPYPATVNDEGMYRHARAVAVDVLGEDGVKVGTPFMGSEDFAFYAQRFPAAFFMIGVGNETTMRKVYPLHSPHFVVDEDVLPVGAALHAAVAMEYLNKH 449          
BLAST of CN186513 vs. ExPASy Swiss-Prot
Match: ILR1_ARATH (IAA-amino acid hydrolase ILR1 OS=Arabidopsis thaliana GN=ILR1 PE=1 SV=2)

HSP 1 Score: 124.79 bits (312), Expect = 3.768e-28
Identity = 59/117 (50.43%), Postives = 82/117 (70.09%), Query Frame = -3
Query:  278 QARVFRCSATVDFFDKGNSVYPPPVNDEDMYEHVKKVAIDLLGLTNYRVVPPMMGAEDFSFYSEVVPAAFYYIGIKNETLGSIHTGHSPYFMIDEDVLPVGAAVHATIAERFLNEYG 628
            QA V+RC A V+F +K  S++P   NDE +YEH KKVA  ++G  N+   P  MG EDFSF+++   AA + +G+KNETLG+    HSPYF +DE+ LPVGAA+HA +A  +L+E+G
Sbjct:  315 QASVYRCKAEVNFEEKKPSLHPVMNNDEGLYEHGKKVAEAMIGKNNFHDFPVTMGGEDFSFFTQKTKAAIFVLGVKNETLGAGKPLHSPYFFVDEEALPVGAALHAAMAVSYLDEHG 431          
BLAST of CN186513 vs. ExPASy Swiss-Prot
Match: ILL1_ORYSJ (IAA-amino acid hydrolase ILR1-like 1 OS=Oryza sativa subsp. japonica GN=ILL1 PE=2 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 9.280e-27
Identity = 58/121 (47.93%), Postives = 81/121 (66.94%), Query Frame = -3
Query:  281 VFVEQARVFRCSATVDFFDKGNSVYPPPVNDEDMYEHVKKVAIDLLGLTNYRVVPPMMGAEDFSFYSEVVPAAFYY-IGIKNETLGSIHTGHSPYFMIDEDVLPVGAAVHATIAERFLNEY 640
            V V QA V RC+A VDF DK    +PP +N   +++   KVA +++G  N R   P+MGAEDF+FY++ +PA +YY +G+ NET G     HSPYF I+ED LP GAA+ A++A R+L E+
Sbjct:  308 VIVSQASVQRCNAVVDFLDKDRPFFPPTINSAGLHDFFVKVASEMVGPKNVRDKQPLMGAEDFAFYADAIPATYYYFLGMYNETRGPQAPHHSPYFTINEDALPYGAALQASLAARYLLEH 428          
BLAST of CN186513 vs. ExPASy Swiss-Prot
Match: ILL1_ORYSI (IAA-amino acid hydrolase ILR1-like 1 OS=Oryza sativa subsp. indica GN=ILL1 PE=2 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 9.280e-27
Identity = 58/121 (47.93%), Postives = 81/121 (66.94%), Query Frame = -3
Query:  281 VFVEQARVFRCSATVDFFDKGNSVYPPPVNDEDMYEHVKKVAIDLLGLTNYRVVPPMMGAEDFSFYSEVVPAAFYY-IGIKNETLGSIHTGHSPYFMIDEDVLPVGAAVHATIAERFLNEY 640
            V V QA V RC+A VDF DK    +PP +N   +++   KVA +++G  N R   P+MGAEDF+FY++ +PA +YY +G+ NET G     HSPYF I+ED LP GAA+ A++A R+L E+
Sbjct:  308 VIVSQASVQRCNAVVDFLDKDRPFFPPTINSAGLHDFFVKVASEMVGPKNVRDKQPLMGAEDFAFYADAIPATYYYFLGMYNETRGPQAPHHSPYFTINEDALPYGAALQASLATRYLLEH 428          
BLAST of CN186513 vs. ExPASy Swiss-Prot
Match: ILL3_ORYSJ (IAA-amino acid hydrolase ILR1-like 3 OS=Oryza sativa subsp. japonica GN=ILL3 PE=2 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 2.067e-26
Identity = 60/124 (48.39%), Postives = 79/124 (63.71%), Query Frame = -3
Query:  272 QARVFRCSATVDFFDKGNSVYPPPVNDEDMYEHVKKVAIDLLGLTNYRVVPPMMGAEDFSFYSEVVPAAFYYIGIKNETLGSIHTG-----HSPYFMIDEDVLPVGAAVHATIAERFLNEYGQG 628
            QA V RC+A VDF +     YP  VNDE+MY H K VA  +LG  N ++ P  MGAEDF FY++ +PAAF+ IG+ N+  G   T      HSP+F++DE+ LPVGAA HA +A  +LN+   G
Sbjct:  291 QAAVNRCTAAVDFMEDKLPPYPATVNDEEMYAHAKAVAESMLGEANVKLSPQGMGAEDFGFYAQRIPAAFFGIGVGNDGGGMAETTTKNQLHSPHFVVDEEALPVGAAFHAAVAIEYLNKNASG 414          
BLAST of CN186513 vs. ExPASy Swiss-Prot
Match: ILL4_ARATH (IAA-amino acid hydrolase ILR1-like 4 OS=Arabidopsis thaliana GN=ILL4 PE=1 SV=2)

HSP 1 Score: 117.857 bits (294), Expect = 4.606e-26
Identity = 51/119 (42.86%), Postives = 83/119 (69.75%), Query Frame = -3
Query:  284 VFVEQARVFRCSATVDFFDKGNSVYPPPVNDEDMYEHVKKVAIDLLGLTNYRVVPPMMGAEDFSFYSEVVPAAFYYIGIKNETLGSIHTGHSPYFMIDEDVLPVGAAVHATIAERFLNE 640
            V   QA V  C+ATVDF ++    +PP VND+ +++  K V+ D+LG+ NY  + P+MG+EDFSFY + +P  F ++G++N+    + + HSPYF ++E++LP GA++HA++A R+L E
Sbjct:  307 VITRQASVNMCNATVDFIEEEKPFFPPTVNDKALHQFFKNVSGDMLGIENYVEMQPLMGSEDFSFYQQAIPGHFSFVGMQNKARSPMASPHSPYFEVNEELLPYGASLHASMATRYLLE 425          
BLAST of CN186513 vs. ExPASy Swiss-Prot
Match: ILL9_ORYSJ (IAA-amino acid hydrolase ILR1-like 9 OS=Oryza sativa subsp. japonica GN=ILL9 PE=2 SV=2)

HSP 1 Score: 116.701 bits (291), Expect = 1.026e-25
Identity = 60/119 (50.42%), Postives = 76/119 (63.87%), Query Frame = -3
Query:  281 QARVFRCSATVDFFDKGNSVYPPPVNDEDMYEHVKKVAIDLLGLTNYRVVPPMMGAEDFSFYSEVVPAAFYYIGIKNETLGS---IHTGHSPYFMIDEDVLPVGAAVHATIAERFLNEY 628
            QA V RC   VDF ++    YP  VNDE MY H +  A  LLG    RV P +MGAEDF FY+  +P+AF+ IG+ N T  S    HT HSP+F+IDE  LPVGAAVHA +A  +L+++
Sbjct:  318 QAAVNRCGGGVDFMEESMRPYPAVVNDEGMYAHARASAERLLGAGGVRVAPQLMGAEDFGFYAARMPSAFFTIGVGNATTSSARAAHTTHSPHFVIDEAALPVGAAVHAAVAIDYLSKH 436          
BLAST of CN186513 vs. ExPASy Swiss-Prot
Match: ILL8_ORYSJ (IAA-amino acid hydrolase ILR1-like 8 OS=Oryza sativa subsp. japonica GN=ILL8 PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 6.651e-25
Identity = 57/120 (47.50%), Postives = 77/120 (64.17%), Query Frame = -3
Query:  281 QARVFRCSATVDFFDKGNSVYPPPVNDEDMYEHVKKVAIDLLGLTNYRVVPPMMGAEDFSFYSEVVPAAFYYIGIKNET----LGSIHTGHSPYFMIDEDVLPVGAAVHATIAERFLNEY 628
            QA V RC+A VDF ++    YP  VND+ MY H K VA  +LG  N RV    MG EDF+FY+   P AF++IG+ NET      ++   HSP+F++DE  LPVGAA+HA +A  +LN++
Sbjct:  322 QAGVNRCAAAVDFLEEELRPYPATVNDDGMYGHAKAVAEAMLGEANVRVAARSMGGEDFAFYARRSPGAFFFIGVGNETTMGPAAAVRPVHSPHFVLDERALPVGAALHAAVAIEYLNKH 441          
The following BLAST results are available for this feature:
BLAST of CN186513 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 19
Match NameE-valueIdentityDescription
ILL6_ORYSJ5.416e-4372.65IAA-amino acid hydrolase ILR1-like 6 OS=Oryza sati... [more]
ILL6_ARATH7.820e-4263.03IAA-amino acid hydrolase ILR1-like 6 OS=Arabidopsi... [more]
ILL7_ORYSJ1.998e-2951.72IAA-amino acid hydrolase ILR1-like 7 OS=Oryza sati... [more]
ILR1_ARATH3.768e-2850.43IAA-amino acid hydrolase ILR1 OS=Arabidopsis thali... [more]
ILL1_ORYSJ9.280e-2747.93IAA-amino acid hydrolase ILR1-like 1 OS=Oryza sati... [more]
ILL1_ORYSI9.280e-2747.93IAA-amino acid hydrolase ILR1-like 1 OS=Oryza sati... [more]
ILL3_ORYSJ2.067e-2648.39IAA-amino acid hydrolase ILR1-like 3 OS=Oryza sati... [more]
ILL4_ARATH4.606e-2642.86IAA-amino acid hydrolase ILR1-like 4 OS=Arabidopsi... [more]
ILL9_ORYSJ1.026e-2550.42IAA-amino acid hydrolase ILR1-like 9 OS=Oryza sati... [more]
ILL8_ORYSJ6.651e-2547.50IAA-amino acid hydrolase ILR1-like 8 OS=Oryza sati... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0003A09_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0003A09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186513 ID=CN186513; Name=CN186513; organism=Citrus sinensis; type=EST; length=642bp
AAATATGTAGAACATTTGGGAGCGTTTACAACTTAAAACTAATGGTACCA
GTAGAGGATCCTCTACTTCTTCATTTACACTCTTGCCCCTTGGATGTCCT
CCCCTAAACCCCGAGTACACCAAAAAACTAGGGGCTTTAACCTATCTGCG
GGATATTATGCCCTTTAACTGCCAAGTGCACCAAAAATAAGGGAGCACAA
GTTAGTATAAGTCTTGCTCTTTGATTAAATACTTCCTGCTCTATTGGCTT
AAGCTACAGCCAATTTTTCCAGCCTTGTCCATACTCATTTAAAAATCTTT
CTGCAATAGTTGCATGAACTGCAGCACCTACAGGTAGAACATCTTCATCT
ATCATAAAATAGGGTGAATGTCCCGTATGTATTGAACCCAAGGTCTCGTT
TTTTATTCCAATGTAGTAAAAGGCTGCAGGAACCACCTCTGAATAAAAAG
AGAAGTCCTCTGCCCCCATCATTGGGGGAACCACCCTATAATTCGTAAGA
CCTAACAAATCAATGGCCACTTTCTTCACATGCTCATACATGTCTTCATC
ATTCACGGGGGGGGGATAGACTGAATTACCCTTGTCGAAAAAATCCACTG
TTGCCGAGCACCTAAAAACCCTAGCCTGCTCAACAAAAACCT
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