CN186497

Overview
NameCN186497
Unique NameCN186497
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length691
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5791 contig Csv1_Contig5791:1084..1774. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN186497 vs. ExPASy Swiss-Prot
Match: THIK2_ARATH (3-ketoacyl-CoA thiolase 2, peroxisomal OS=Arabidopsis thaliana GN=PED1 PE=1 SV=2)

HSP 1 Score: 276.944 bits (707), Expect = 6.785e-74
Identity = 139/166 (83.73%), Postives = 147/166 (88.55%), Query Frame = -3
Query:  192 SDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMXXXXXXXXXXXVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFERGDCADELCNVRKVESNNFLSKD 689
            SDGAGAVLLMKRSVAM+KGLP+LGVFRTFAAVGVDPAIM           VK+AGL+LDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGA+AIGHPLG TGARCVATLLHEMKRRG+DCRFGV+SMCIGTGMGAAAVFERGD  DEL N RKVE+   LSKD
Sbjct:  295 SDGAGAVLLMKRSVAMQKGLPVLGVFRTFAAVGVDPAIMGIGPAVAIPAAVKAAGLELDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGAMAIGHPLGATGARCVATLLHEMKRRGKDCRFGVVSMCIGTGMGAAAVFERGDGVDELRNARKVEAQGLLSKD 460          
BLAST of CN186497 vs. ExPASy Swiss-Prot
Match: THIK1_ARATH (3-ketoacyl-CoA thiolase 1, peroxisomal OS=Arabidopsis thaliana GN=KAT1 PE=1 SV=2)

HSP 1 Score: 258.84 bits (660), Expect = 1.912e-68
Identity = 128/157 (81.53%), Postives = 141/157 (89.81%), Query Frame = -3
Query:  219 SDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMXXXXXXXXXXXVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFERGDCADELCNVRKV 689
            SDGAGAVLLM+R+VAM+KGLPILGVFRTF+AVGVDPAIM           VK+AGL+L+D+DLFEINEAFASQFVYCRNKLGLD EKINVNGGA+AIGHPLG TGARCVATLLHEMKRRG+DCRFGV+SMCIG+GMGAAAVFERG   DELC+VRKV
Sbjct:  287 SDGAGAVLLMRRNVAMQKGLPILGVFRTFSAVGVDPAIMGVGPAVAIPAAVKAAGLELNDVDLFEINEAFASQFVYCRNKLGLDAEKINVNGGAIAIGHPLGATGARCVATLLHEMKRRGKDCRFGVVSMCIGSGMGAAAVFERGGGVDELCDVRKV 443          
BLAST of CN186497 vs. ExPASy Swiss-Prot
Match: THIK5_ARATH (3-ketoacyl-CoA thiolase 5, peroxisomal OS=Arabidopsis thaliana GN=KAT5 PE=2 SV=2)

HSP 1 Score: 233.032 bits (593), Expect = 1.124e-60
Identity = 116/155 (74.84%), Postives = 127/155 (81.94%), Query Frame = -3
Query:  225 SDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMXXXXXXXXXXXVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFERGDCADELCNVR 689
            SDGAGAVLLMKRS+AM+KGLPILGVFR+FA  GV+P++M            K AGL + DIDLFEINEAFASQ+VY   KL LD EK+NVNGGA+AIGHPLG TGARCVATLLHEMKRRG+DCRFGVISMCIGTGMGAAAVFERGD  D L N R
Sbjct:  296 SDGAGAVLLMKRSLAMKKGLPILGVFRSFAVTGVEPSVMGIGPAVAIPAATKLAGLNVSDIDLFEINEAFASQYVYSCKKLELDMEKVNVNGGAIAIGHPLGATGARCVATLLHEMKRRGKDCRFGVISMCIGTGMGAAAVFERGDSVDNLSNAR 450          
BLAST of CN186497 vs. ExPASy Swiss-Prot
Match: THIKB_MOUSE (3-ketoacyl-CoA thiolase B, peroxisomal OS=Mus musculus GN=Acaa1b PE=2 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 3.074e-42
Identity = 90/143 (62.94%), Postives = 107/143 (74.83%), Query Frame = -3
Query:  261 SDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMXXXXXXXXXXXVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFE 689
            SDGA AVLL +RS A   GLPILGV R++A VGV P +M           ++ AGL ++DID+FEINEAFASQ VYC  KLG+  EK+N  GGA+A+GHPLG TGAR V TLL+E+KRRGR   +GV+SMCIGTGMGAAAVFE
Sbjct:  279 SDGAAAVLLARRSKAEELGLPILGVLRSYAVVGVPPDVMGIGPAYAIPAALQKAGLTVNDIDIFEINEAFASQAVYCVEKLGIPAEKVNPLGGAIALGHPLGCTGARQVVTLLNELKRRGRRA-YGVVSMCIGTGMGAAAVFE 420          
BLAST of CN186497 vs. ExPASy Swiss-Prot
Match: THIKA_MOUSE (3-ketoacyl-CoA thiolase A, peroxisomal OS=Mus musculus GN=Acaa1a PE=2 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 3.074e-42
Identity = 90/143 (62.94%), Postives = 107/143 (74.83%), Query Frame = -3
Query:  261 SDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMXXXXXXXXXXXVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFE 689
            SDGA AVLL +RS A   GLPILGV R++A VGV P +M           ++ AGL ++DID+FEINEAFASQ VYC  KLG+  EK+N  GGA+A+GHPLG TGAR V TLL+E+KRRGR   +GV+SMCIGTGMGAAAVFE
Sbjct:  279 SDGAAAVLLARRSKAEELGLPILGVLRSYAVVGVPPDVMGIGPAYAIPAALQKAGLTVNDIDIFEINEAFASQAVYCVEKLGIPAEKVNPLGGAIALGHPLGCTGARQVVTLLNELKRRGRRA-YGVVSMCIGTGMGAAAVFE 420          
BLAST of CN186497 vs. ExPASy Swiss-Prot
Match: THIKB_RAT (3-ketoacyl-CoA thiolase B, peroxisomal OS=Rattus norvegicus GN=Acaa1b PE=2 SV=2)

HSP 1 Score: 171.014 bits (432), Expect = 5.243e-42
Identity = 90/143 (62.94%), Postives = 107/143 (74.83%), Query Frame = -3
Query:  261 SDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMXXXXXXXXXXXVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFE 689
            SDGA AVLL +RS A   GLPILGV R++A VGV P IM           ++ AGL ++DID+FEINEAFASQ +YC  KLG+  EK+N  GGA+A+GHPLG TGAR V TLL+E+KRRGR   +GV+SMCIGTGMGAAAVFE
Sbjct:  279 SDGAAAVLLARRSKAEELGLPILGVLRSYAVVGVPPDIMGIGPAYAIPAALQKAGLTVNDIDIFEINEAFASQALYCVEKLGIPAEKVNPLGGAIALGHPLGCTGARQVVTLLNELKRRGRRA-YGVVSMCIGTGMGAAAVFE 420          
BLAST of CN186497 vs. ExPASy Swiss-Prot
Match: THIKA_RAT (3-ketoacyl-CoA thiolase A, peroxisomal OS=Rattus norvegicus GN=Acaa1a PE=2 SV=2)

HSP 1 Score: 171.014 bits (432), Expect = 5.243e-42
Identity = 90/143 (62.94%), Postives = 107/143 (74.83%), Query Frame = -3
Query:  261 SDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMXXXXXXXXXXXVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFE 689
            SDGA AVLL +RS A   GLPILGV R++A VGV P IM           ++ AGL ++DID+FEINEAFASQ +YC  KLG+  EK+N  GGA+A+GHPLG TGAR V TLL+E+KRRGR   +GV+SMCIGTGMGAAAVFE
Sbjct:  279 SDGAAAVLLARRSKAEELGLPILGVLRSYAVVGVPPDIMGIGPAYAIPAALQKAGLTVNDIDIFEINEAFASQALYCVEKLGIPAEKVNPLGGAIALGHPLGCTGARQVVTLLNELKRRGRRA-YGVVSMCIGTGMGAAAVFE 420          
BLAST of CN186497 vs. ExPASy Swiss-Prot
Match: THIK_HUMAN (3-ketoacyl-CoA thiolase, peroxisomal OS=Homo sapiens GN=ACAA1 PE=1 SV=2)

HSP 1 Score: 168.318 bits (425), Expect = 3.399e-41
Identity = 88/143 (61.54%), Postives = 105/143 (73.43%), Query Frame = -3
Query:  261 SDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMXXXXXXXXXXXVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFE 689
            SDGA A+LL +RS A   GLPILGV R++A VGV P IM           ++ AGL + D+D+FEINEAFASQ  YC  KL L PEK+N  GGA+A+GHPLG TGAR V TLL+E+KRRG+   +GV+SMCIGTGMGAAAVFE
Sbjct:  279 SDGAAAILLARRSKAEELGLPILGVLRSYAVVGVPPDIMGIGPAYAIPVALQKAGLTVSDVDIFEINEAFASQAAYCVEKLRLPPEKVNPLGGAVALGHPLGCTGARQVITLLNELKRRGKRA-YGVVSMCIGTGMGAAAVFE 420          
BLAST of CN186497 vs. ExPASy Swiss-Prot
Match: THIK_YEAST (3-ketoacyl-CoA thiolase, peroxisomal OS=Saccharomyces cerevisiae GN=FOX3 PE=1 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 2.521e-36
Identity = 78/142 (54.93%), Postives = 100/142 (70.42%), Query Frame = -3
Query:  264 SDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMXXXXXXXXXXXVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVF 689
            SDG   VLL +RSVA +  LP+LG +  F  VGV P IM           +++ GLQ+ DID+FEINEAFA+Q +YC +KLG+D  K+N  GGA+A+GHPLG TGAR VAT+L E+K+     + GV+SMCIGTGMGAAA+F
Sbjct:  277 SDGVAGVLLARRSVANQLNLPVLGRYIDFQTVGVPPEIMGVGPAYAIPKVLEATGLQVQDIDIFEINEAFAAQALYCIHKLGIDLNKVNPRGGAIALGHPLGCTGARQVATILRELKKD----QIGVVSMCIGTGMGAAAIF 414          
BLAST of CN186497 vs. ExPASy Swiss-Prot
Match: FADA_BACSU (3-ketoacyl-CoA thiolase OS=Bacillus subtilis GN=fadA PE=2 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 9.578e-36
Identity = 80/143 (55.94%), Postives = 97/143 (67.83%), Query Frame = -3
Query:  261 SDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMXXXXXXXXXXXVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFE 689
            SDGA AV+LM R  A   GL  L  FR+FA  GV P +M           +K AGLQL DI LFE+NEAFASQ +    +LG+D EK+NVNGGA+A+GHPLG TG +   +L+HEMKRR    +FGV++MCIG GMGAA VFE
Sbjct:  249 SDGAAAVMLMDREKADALGLAPLVKFRSFAVGGVPPEVMGIGPVEAIPRALKLAGLQLQDIGLFELNEAFASQAIQVIRELGIDEEKVNVNGGAIALGHPLGCTGTKLTLSLIHEMKRRNE--QFGVVTMCIGGGMGAAGVFE 389          
The following BLAST results are available for this feature:
BLAST of CN186497 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 283
Match NameE-valueIdentityDescription
THIK2_ARATH6.785e-7483.733-ketoacyl-CoA thiolase 2, peroxisomal OS=Arabidop... [more]
THIK1_ARATH1.912e-6881.533-ketoacyl-CoA thiolase 1, peroxisomal OS=Arabidop... [more]
THIK5_ARATH1.124e-6074.843-ketoacyl-CoA thiolase 5, peroxisomal OS=Arabidop... [more]
THIKB_MOUSE3.074e-4262.943-ketoacyl-CoA thiolase B, peroxisomal OS=Mus musc... [more]
THIKA_MOUSE3.074e-4262.943-ketoacyl-CoA thiolase A, peroxisomal OS=Mus musc... [more]
THIKB_RAT5.243e-4262.943-ketoacyl-CoA thiolase B, peroxisomal OS=Rattus n... [more]
THIKA_RAT5.243e-4262.943-ketoacyl-CoA thiolase A, peroxisomal OS=Rattus n... [more]
THIK_HUMAN3.399e-4161.543-ketoacyl-CoA thiolase, peroxisomal OS=Homo sapie... [more]
THIK_YEAST2.521e-3654.933-ketoacyl-CoA thiolase, peroxisomal OS=Saccharomy... [more]
FADA_BACSU9.578e-3655.943-ketoacyl-CoA thiolase OS=Bacillus subtilis GN=fa... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0002P23_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002P23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186497 ID=CN186497; Name=CN186497; organism=Citrus sinensis; type=EST; length=691bp
AGTTGACGATATTTAAATTAATCATATCAAAACCGAAGATCCTGACAGCT
GTGTGACCTGTGGTCGGCTTTGTGATCACAACAAAGCAATCTTATTACAT
ATAACTGTTCATTAAAAATACTCGGATTCCAAACACAATATGATCGTTCC
GCGAGAACATGCTGCAGCAGACAAATGGTAATCTACAGAACATCCTTAGA
TAAGAAATTGTTGCTTTCCACTTTCCTGACATTGCAAAGCTCATCGGCAC
AGTCACCTCTTTCGAAAACAGCTGCTGCCCCCATTCCTGTGCCTATGCAC
ATTGATATCACTCCAAAGCGGCAGTCTCTGCCTCGCCTCTTCATCTCATG
CAATAGAGTTGCAACGCAGCGTGCACCTGTTGTGCCCAGAGGATGCCCAA
TGGCAAGTGCACCTCCATTCACATTGATCTTTTCTGGATCGAGACCCAGC
TTGTTACGGCAATATACAAACTGGGATGCAAATGCCTCATTTATCTCAAA
AAGATCAATATCGTCAAGTTGAAGACCCGCAGACTTAACTGCAGCTGGAA
TTGCCACAGCTGGGCCAACACCCATGATGGCAGGATCCACACCAACAGCA
GCAAAGGTCCTGAATACACCAAGAATGGGTAGGCCTTTACGCATGGCAAC
GCTTCTCTTCATAAGCAGAACAGCCCCAGCACCATCACTCA
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