CN186483
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN186483 vs. ExPASy Swiss-Prot
Match: BI1L_ARATH (BI1-like protein OS=Arabidopsis thaliana GN=At4g15470 PE=2 SV=1) HSP 1 Score: 182.57 bits (462), Expect = 1.477e-45 Identity = 93/127 (73.23%), Postives = 103/127 (81.10%), Query Frame = -3 Query: 248 VSCANTDGRIVLEALILTSAVVCSLTGYTFWASKKGKDFSFLGPXXXXXXXXXXXXXFMQMFFPLGSTSTAL*GGISALVFCGYIVYDTDNLIKRFTYDDYILASVTLYLDILNLFISILRVLRSSD 628 VSCA T+GRIVL+ALILT +VV SLT YTFWA+KKGKDFSFLGP F+QMFFPLG TS A+ GG SALVFCGYIVYDTDNLIKRFTYD+YILASV LYLDILNLF++ILR+LR D Sbjct: 129 VSCAMTEGRIVLQALILTLSVVGSLTAYTFWAAKKGKDFSFLGPILFTSLIILVVTSFIQMFFPLGPTSVAVYGGFSALVFCGYIVYDTDNLIKRFTYDEYILASVALYLDILNLFLTILRILRQGD 255
BLAST of CN186483 vs. ExPASy Swiss-Prot
Match: TMBI4_MOUSE (Transmembrane BAX inhibitor motif-containing protein 4 OS=Mus musculus GN=Tmbim4 PE=2 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.301e-14 Identity = 41/119 (34.45%), Postives = 72/119 (60.50%), Query Frame = -3 Query: 254 DGRIVLEALILTSAVVCSLTGYTFWASKKGKDFSFLGPXXXXXXXXXXXXXFMQMFFPLGSTSTAL*GGISALVFCGYIVYDTDNLIKRFTYDDYILASVTLYLDILNLFISILRVLRS 610 D +VL+A I+T+AV LT YT + + DF+ G F+++FF T + + AL+FCG+I+YDT +L+ R + ++Y++A+++LY+DI+NLF+ +L+ L + Sbjct: 120 DVYLVLQAFIMTTAVFLGLTAYTLQSKR---DFTKFGAGLFAGLWILCLAGFLKLFF-YSETMELVLASLGALLFCGFIIYDTHSLMHRLSPEEYVIAAISLYMDIINLFLHLLKFLEA 234
BLAST of CN186483 vs. ExPASy Swiss-Prot
Match: YQE4_SCHPO (Uncharacterized membrane protein C576.04 OS=Schizosaccharomyces pombe GN=SPCC576.04 PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 6.694e-14 Identity = 43/115 (37.39%), Postives = 65/115 (56.52%), Query Frame = -3 Query: 260 RIVLEALILTSAVVCSLTGYTFWASKKGKDFSFLGPXXXXXXXXXXXXXFMQMFFPLGSTSTAL*GGISALVFCGYIVYDTDNLIKRFTYDDYILASVTLYLDILNLFISILRVL 604 RI+LEA+ +T V +LT +TF + DFS LG + F P G LVFCGYI++DT N++ R++ +++I++S+ LYLD +NLFI IL++L Sbjct: 146 RIILEAVFITLGVFVALTAFTFQSKW---DFSRLGGFLYVSLWSLILTPLIFFFVPSTPFIDMAFAGFGTLVFCGYILFDTYNILHRYSPEEFIMSSLMLYLDFINLFIRILQIL 257
BLAST of CN186483 vs. ExPASy Swiss-Prot
Match: TMBI4_HUMAN (Transmembrane BAX inhibitor motif-containing protein 4 OS=Homo sapiens GN=TMBIM4 PE=1 SV=2) HSP 1 Score: 77.0258 bits (188), Expect = 8.742e-14 Identity = 45/119 (37.82%), Postives = 68/119 (57.14%), Query Frame = -3 Query: 254 DGRIVLEALILTSAVVCSLTGYTFWASKKGKDFSFLGPXXXXXXXXXXXXXFMQMFFPLGSTSTAL*GGISALVFCGYIVYDTDNLIKRFTYDDYILASVTLYLDILNLFISILRVLRS 610 D I+L+A ILT+ V LT YT + K DFS G F++ FF L AL+FCG+I+YDT +L+ + + ++Y+LA+++LYLDI+NLF+ +LR L + Sbjct: 120 DVYIILQAFILTTTVFFGLTVYTLQSKK---DFSKFGAGLFALLWILCLSGFLKFFFYSEIMELVL-AAAGALLFCGFIIYDTHSLMHKLSPEEYVLAAISLYLDIINLFLHLLRFLEA 234
BLAST of CN186483 vs. ExPASy Swiss-Prot
Match: TMBI4_CAEEL (Transmembrane BAX inhibitor motif-containing protein 4 OS=Caenorhabditis elegans GN=tmbi-4 PE=2 SV=2) HSP 1 Score: 67.3958 bits (163), Expect = 6.927e-11 Identity = 42/121 (34.71%), Postives = 65/121 (53.72%), Query Frame = -3 Query: 248 DGRIVLEALILTSAVVCSLTGYTFWASKKGKDFSFLGPXXXXXXXXXXXXXFMQMFFPLGSTSTAL*GGISALVFCGYIVYDTDNLIKRFTYDDYILASVTLYLDILNLFISILRVLRSSD 610 + ++VLEA ++T VV SL YT + +DFS QMFF + + + A +FC +V D D ++ RF+ +DYI A V+LY+DILNLFI IL+++ ++ Sbjct: 159 EAKVVLEAAVITGLVVASLFAYTL---QNKRDFSVGYASMGSLLCVLLWAGIFQMFFMSPAVNFVI-NVFGAGLFCVLLVIDLDMIMYRFSPEDYICACVSLYMDILNLFIRILQIVAEAN 275 The following BLAST results are available for this feature:
BLAST of CN186483 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN186483 ID=CN186483; Name=CN186483; organism=Citrus sinensis; type=EST; length=633bpback to top |