EY665772
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY665772 vs. ExPASy Swiss-Prot
Match: CB24_ARATH (Chlorophyll a-b binding protein 4, chloroplastic OS=Arabidopsis thaliana GN=CAB4 PE=1 SV=1) HSP 1 Score: 344.354 bits (882), Expect = 2.175e-102 Identity = 168/197 (85.28%), Postives = 178/197 (90.36%), Query Frame = 3 Query: 99 MATVTTQASAAVFRPCASKSRFLTGSSGKLNREVALKPVSSSA---SFKVEAK-GEWLPGLASPTYLNGSLPGDNGFDPLGLAEDPENLKWYVQAELVNSRWAMLGVVGMLLPEVFTKIGIINVPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAP 677 MATVTT ASA++FRPC SK RFLTGSSG+LNR+++ + SSA SFKVEAK GEWLPGLASP YL GSL GDNGFDPLGLAEDPENLKW+VQAELVN RWAMLGV GMLLPEVFTKIGIINVP+WYDAGK +YFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLP EVGYPGGIFNPLNFAP Sbjct: 1 MATVTTHASASIFRPCTSKPRFLTGSSGRLNRDLSFTSIGSSAKTSSFKVEAKKGEWLPGLASPDYLTGSLAGDNGFDPLGLAEDPENLKWFVQAELVNGRWAMLGVAGMLLPEVFTKIGIINVPEWYDAGKEQYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPKGEVGYPGGIFNPLNFAP 197 HSP 2 Score: 50.447 bits (119), Expect = 2.175e-102 Identity = 30/48 (62.50%), Postives = 32/48 (66.67%), Query Frame = 1 Query: 676 PTDEAKEKELANGKLAMLAFFGIYWSAQWDQAKGQFENLLQT*SLNPW 819 PT EAKEKELANG+LAMLAF G KG FENLLQ S +PW Sbjct: 197 PTQEAKEKELANGRLAMLAFLGFVVQHN-VTGKGPFENLLQHLS-DPW 242
BLAST of EY665772 vs. ExPASy Swiss-Prot
Match: CB24_PEA (Chlorophyll a-b binding protein P4, chloroplastic OS=Pisum sativum GN=lhcA-P4 PE=1 SV=1) HSP 1 Score: 342.428 bits (877), Expect = 5.291e-101 Identity = 171/196 (87.24%), Postives = 176/196 (89.80%), Query Frame = 3 Query: 99 MATVTTQASAAVFRPCASKSRFLTGSSGKLNREVALKPV--SSSASFKVEAK-GEWLPGLASPTYLNGSLPGDNGFDPLGLAEDPENLKWYVQAELVNSRWAMLGVVGMLLPEVFTKIGIINVPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAP 677 MATVTTQASAA+F PC KSRFL GSSGKLNR VA +PV S SASFKVEAK GEWLPGLASP YL GSLPGDNGFDPLGLAEDPENL+W+VQAELVN RWAMLGV GMLLPEVFT IGIINVP+WY AGK EYFASSSTLFVIEFIL HYVEIRRWQDIKNPGSVNQDPIFKQYSLP EVGYPGGIFNPLNFAP Sbjct: 1 MATVTTQASAAIFGPCGLKSRFLGGSSGKLNRGVAFRPVGCSPSASFKVEAKKGEWLPGLASPGYLTGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFTSIGIINVPKWYAAGKEEYFASSSTLFVIEFILSHYVEIRRWQDIKNPGSVNQDPIFKQYSLPAGEVGYPGGIFNPLNFAP 196 HSP 2 Score: 47.7506 bits (112), Expect = 5.291e-101 Identity = 32/59 (54.24%), Postives = 37/59 (62.71%), Query Frame = 1 Query: 676 PTDEAKEKELANGKLAMLAFFGIYWSAQWDQAKGQFENLLQT*SLNPWEQNHSSKTLKG 852 PT EAKEKE+ANG+LAMLAF G KG F+NLLQ S +PW N +TL G Sbjct: 196 PTLEAKEKEIANGRLAMLAFLGFIIQHN-VTGKGPFDNLLQHIS-DPW-HNTIVQTLGG 251
BLAST of EY665772 vs. ExPASy Swiss-Prot
Match: CB120_HORVU (Chlorophyll a-b binding protein 1B-20, chloroplastic (Fragment) OS=Hordeum vulgare GN=LHC Ib-20 PE=1 SV=1) HSP 1 Score: 226.868 bits (577), Expect = 1.549e-64 Identity = 108/157 (68.79%), Postives = 124/157 (78.98%), Query Frame = 3 Query: 210 PVSSSASFKVEAKGEWLPGLASPTYLNGSLPGDNGFDPLGLAEDPENLKWYVQAELVNSRWAMLGVVGMLLPEVFTKIGIINVPQWYDA-GKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAP 677 P S+ V+AKG WLPGL SP YL+GSL GDNGFDPL LAEDPE+L+W+VQA++VN RWAMLGV GML+PEV TK G++N P+W GK YFASSST + + YVEIRRWQDIKNPGSVNQDPIFK YSLPP+E GYPG +FNPLNFAP Sbjct: 21 PRSTRRDVAVQAKGSWLPGLQSPAYLDGSLEGDNGFDPLALAEDPEDLRWFVQADVVNGRWAMLGVAGMLIPEVLTKAGLMNAPEWLRLPGKETYFASSSTALRVH-MSSTYVEIRRWQDIKNPGSVNQDPIFKSYSLPPHECGYPGRVFNPLNFAP 176 HSP 2 Score: 41.5874 bits (96), Expect = 1.549e-64 Identity = 28/57 (49.12%), Postives = 34/57 (59.65%), Query Frame = 1 Query: 685 EAKEKELANGKLAMLAFFGIYWSAQWDQAKGQFENLLQT*SLNPWEQNHSSKTLKGK 855 E KEKELANG+LAMLAF G + KG FENL Q +PW N +T+ G+ Sbjct: 178 ENKEKELANGRLAMLAFLG-FLVQHNVHGKGPFENLQQH-LADPW-HNTIIQTISGQ 231
BLAST of EY665772 vs. ExPASy Swiss-Prot
Match: CB12_PETHY (Chlorophyll a-b binding protein, chloroplastic OS=Petunia hybrida PE=2 SV=1) HSP 1 Score: 186.037 bits (471), Expect = 3.503e-48 Identity = 93/179 (51.96%), Postives = 118/179 (65.92%), Query Frame = 3 Query: 147 ASKSRFLTGSSGKLNREVALKPVSSSASFKVEAKGE---WLPGLASPTYLNGSLPGDNGFDPLGLAEDPENLKWYVQAELVNSRWAMLGVVGMLLPEVFTKIGIINVPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGI-FNPLNF 671 A+K+ FL G ++++ +A S A V A + W PG P +L+GSLPGD GFDPLGL DPE+LKW QAELV+SRWAMLG G+ +PE TKIG++N P WY AG+ EYF ++TLFVIE +L + E RRW DI PG VN DPIF L +VGYPGG+ F+PL + Sbjct: 29 ATKASFLGGKRLRVSKFIAPVGSRSVAVSAVAADPDRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSDPESLKWNAQAELVHSRWAMLGAAGIFIPEFLTKIGVLNTPSWYTAGEQEYFTDTTTLFVIELVLIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGW 207 HSP 2 Score: 27.7202 bits (60), Expect = 3.503e-48 Identity = 15/36 (41.67%), Postives = 19/36 (52.78%), Query Frame = 1 Query: 685 EAKEKELANGKLAMLAFFGIYWSAQWDQAKGQFENL 792 E + KE+ NG+LAMLA G W G +NL Sbjct: 217 ELRTKEIKNGRLAMLAVMGA-WFQHIYTGTGPIDNL 251
BLAST of EY665772 vs. ExPASy Swiss-Prot
Match: CB12_SOLLC (Chlorophyll a-b binding protein 7, chloroplastic OS=Solanum lycopersicum GN=CAB7 PE=3 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 6.457e-47 Identity = 88/178 (49.44%), Postives = 117/178 (65.73%), Query Frame = 3 Query: 150 SKSRFLTGSSGKLNREVALKPVSSSASFKVEAKGE---WLPGLASPTYLNGSLPGDNGFDPLGLAEDPENLKWYVQAELVNSRWAMLGVVGMLLPEVFTKIGIINVPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGI-FNPLNF 671 +K+ FL G ++++ S+ + V A + W PG P +L+GSLPGD GFDPLGLA DPE+L+W QAELV+ RWAMLG G+ +PE+ TKIGI+N P WY AG+ EYF ++TLF++E +L + E RRW DI PG VN DPIF L +VGYPGG+ F+PL + Sbjct: 30 TKASFLGGRRLRVSKYSTTPTARSATTVCVAADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLASDPESLRWNQQAELVHCRWAMLGAAGIFIPELLTKIGILNTPSWYTAGEQEYFTDTTTLFIVELVLIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGW 207 HSP 2 Score: 27.7202 bits (60), Expect = 6.457e-47 Identity = 15/36 (41.67%), Postives = 19/36 (52.78%), Query Frame = 1 Query: 685 EAKEKELANGKLAMLAFFGIYWSAQWDQAKGQFENL 792 E + KE+ NG+LAMLA G W G +NL Sbjct: 217 ELRTKEIKNGRLAMLAVMGA-WFQHIYTGTGPIDNL 251
BLAST of EY665772 vs. ExPASy Swiss-Prot
Match: CB13_SOLLC (Chlorophyll a-b binding protein 8, chloroplastic OS=Solanum lycopersicum GN=CAB8 PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 2.470e-25 Identity = 78/215 (36.28%), Postives = 109/215 (50.70%), Query Frame = 3 Query: 102 ATVTTQASAAVFRPCASKSRFLTGSSGKLNREVALKPVSSSASFKVEAKGEWLPGLASPTYLNGSLPGDNGFDPLGLAEDPENL------KWYVQAELVNSRWAMLGVVGMLLPEVFTKIGIINVPQ-----WYD------AGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSL-------PPNEVGYPGG-IFNPLNF 671 ++++T A AA + S+ +T + + R + PV A+ ++ W S +YL+G LPGD GFDPLGL+ DPE KW E++N R+AMLG G + PE+ K G+I PQ W+ AG Y+A + TLFV+E L + E RR+QD PGS+ KQY L + YPGG +FNPL F Sbjct: 10 SSISTSAEAARQIIGSRISQSVTRKASFVVRAASTPPVKQGANRQL-----WFASKQSLSYLDGRLPGDFGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRFAMLGAAGAIAPEILGKAGLI--PQETALAWFQTGVIPPAGTYNYWADNYTLFVLEMALMGFAEHRRFQDWAKPGSMG-----KQYFLGLEKGLGGSGDPAYPGGPLFNPLGF 211 HSP 2 Score: 30.0314 bits (66), Expect = 2.470e-25 Identity = 17/37 (45.95%), Postives = 22/37 (59.46%), Query Frame = 1 Query: 685 EAKEKELANGKLAMLAFFGIYWSAQWDQAKGQFENLL 795 E K KE+ NG+LAMLA G Y+ G ++NLL Sbjct: 220 ELKLKEIKNGRLAMLAILG-YFIQALVTGVGPYQNLL 255
BLAST of EY665772 vs. ExPASy Swiss-Prot
Match: CB23_PEA (Chlorophyll a-b binding protein 3, chloroplastic OS=Pisum sativum GN=lhca3 PE=1 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 2.645e-24 Identity = 69/164 (42.07%), Postives = 86/164 (52.44%), Query Frame = 3 Query: 255 WLPGLASPTYLNGSLPGDNGFDPLGLAEDPENL------KWYVQAELVNSRWAMLGVVGMLLPEVFTKIGIINVPQ-----WYD------AGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSL-------PPNEVGYPGG-IFNPLNF 671 W S +YL+GSLPGD GFDPLGL+ DPE +W E++N R+AMLG VG + PE K+G+I PQ W+ AG Y+A + TLFV+E L + E RR+QD PGS+ KQY L YPGG FNPL F Sbjct: 58 WFASKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPRWLAYGEVINGRFAMLGAVGAIAPEYLGKVGLI--PQETALAWFQTGVIPPAGTYNYWADNYTLFVLEMALMGFAEHRRFQDWAKPGSMG-----KQYFLGLEKGFGGSGNPAYPGGPFFNPLGF 213 HSP 2 Score: 29.261 bits (64), Expect = 2.645e-24 Identity = 17/37 (45.95%), Postives = 22/37 (59.46%), Query Frame = 1 Query: 685 EAKEKELANGKLAMLAFFGIYWSAQWDQAKGQFENLL 795 E K KE+ NG+LAMLA G Y+ G ++NLL Sbjct: 222 ELKLKEVKNGRLAMLAILG-YFIQGLVTGVGPYQNLL 257
BLAST of EY665772 vs. ExPASy Swiss-Prot
Match: CB121_HORVU (Chlorophyll a-b binding protein 1B-21, chloroplastic OS=Hordeum vulgare GN=LHC Ib-21 PE=1 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 3.695e-23 Identity = 56/160 (35.00%), Postives = 84/160 (52.50%), Query Frame = 3 Query: 219 SSASFKVEAKGEWLPGLASPTYLNGSLPGDNGFDPLGLAEDPENLKWYVQAELVNSRWAMLGVVGMLLPEVFTKIGIINVPQW--YDAGKAEY------FASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFA 674 ++ S +V EW PG P +L+GS PGD GFDPLGLA PEN + + ++E+ + RWAML V G+L+PE + +W G+A Y + + T+ IEF+ + E +R ++ +DP K+ YPGG F+PL F+ Sbjct: 36 ATTSGRVTMSAEWFPGQPRPAHLDGSSPGDFGFDPLGLATVPENFERFKESEIYHCRWAMLCVPGVLVPEALGLGNWVKAQEWAALPDGQATYLGNPVPWGNLPTILAIEFLAIAFAEQQR--------TMEKDPEKKK---------YPGGAFDPLGFS 178 HSP 2 Score: 35.8094 bits (81), Expect = 3.695e-23 Identity = 21/49 (42.86%), Postives = 25/49 (51.02%), Query Frame = 1 Query: 682 DEAKEKELANGKLAMLAFFGIYWSAQWDQAKGQFENLLQT*SLNPWEQN 828 +E K KE+ NG+LAMLAF G G EN L T +PW N Sbjct: 185 EELKLKEIKNGRLAMLAFVGFCVQQSAYPGTGPLEN-LATHLADPWHNN 232
BLAST of EY665772 vs. ExPASy Swiss-Prot
Match: CB11_SOLLC (Chlorophyll a-b binding protein 6A, chloroplastic OS=Solanum lycopersicum GN=CAB6A PE=2 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 1.059e-22 Identity = 57/179 (31.84%), Postives = 92/179 (51.40%), Query Frame = 3 Query: 162 FLTGSSGKLNREVALKPVSSSASFKVEAKGEWLPGLASPTYLNGSLPGDNGFDPLGLAEDPENLKWYVQAELVNSRWAMLGVVGMLLPEVFTKIGIINVPQW--YDAGKAEY------FASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFA 674 FL+ + K + + +++ + +W+PG P+YL+GS PGD GFD LGL E P NL+ Y ++EL++ RWAML V G+++PE + +W G+A Y + + T+ IEF+ +VE +R S+ +D K+ YPGG F+PL ++ Sbjct: 18 FLSSTKSKFAAAMPVYVGATNFMSRFSMSADWMPGQPRPSYLDGSAPGDFGFDSLGLGEVPANLERYKESELIHCRWAMLAVPGIIVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILAIEFLAIAFVEHQR--------SMEKDSEKKK---------YPGGAFDPLGYS 179 HSP 2 Score: 32.3426 bits (72), Expect = 1.059e-22 Identity = 19/49 (38.78%), Postives = 24/49 (48.98%), Query Frame = 1 Query: 682 DEAKEKELANGKLAMLAFFGIYWSAQWDQAKGQFENLLQT*SLNPWEQN 828 +E K KE+ NG+LA+LA G G EN L T +PW N Sbjct: 186 EELKVKEIKNGRLALLAIVGFCVQQSAYLGTGPLEN-LATHLADPWHNN 233
BLAST of EY665772 vs. ExPASy Swiss-Prot
Match: CB4_SPIOL (Chlorophyll a-b binding protein CP24, chloroplastic OS=Spinacia oleracea PE=2 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.647e-21 Identity = 76/216 (35.19%), Postives = 109/216 (50.46%), Query Frame = 3 Query: 57 TTPALRGS*LSSGNMATVTTQASAAVFRPCASKSRFLTGSSGKLNREVALKPVSSSASFKVEAKGEWLPGLASPTYLNGSLPGDNGFDPLGLAEDPENLKWYVQAELVNSRWAMLGVVGMLLPEVFTKIGIINVPQWYDAGK---AEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQD------PIFKQYSLPPNEVGYPGG-IFNPLNFA 674 T+P L G SS ++ V ++ A V + +S KL A S V+ G +L P +L+GSLPGD GFDPLGL +DP LKWY +AEL++ RWAML V+G+ + + +T I W++AG A S TL + +L +VE +RW D +P S + + + +S E GYPGG F+PL+ A Sbjct: 15 TSPFLSGGKKSSQSLLFVNSKVGAGV-----------STTSRKLVVVAAAAAPKKSWIPAVKGGGNFL----DPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMLAVLGIFVGQAWTGI------PWFEAGADPGAVAPFSFGTLLGTQLLLMGWVESKRWVDFFDPDSQSVEWATPWSRTAENFSNSTGEQGYPGGKFFDPLSLA 209 The following BLAST results are available for this feature:
BLAST of EY665772 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 63
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Sequences
The
following sequences are available for this feature:
EST sequence >EY665772 ID=EY665772; Name=EY665772; organism=Citrus sinensis; type=EST; length=922bpback to top |