CN186377

Overview
NameCN186377
Unique NameCN186377
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length810
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN186377 vs. ExPASy Swiss-Prot
Match: HA22A_ARATH (HVA22-like protein a OS=Arabidopsis thaliana GN=HVA22A PE=2 SV=1)

HSP 1 Score: 282.722 bits (722), Expect = 1.638e-75
Identity = 127/171 (74.27%), Postives = 152/171 (88.89%), Query Frame = 1
Query:  118 MGSGAGSFLKVLLKNFDVLAGPVVSLVYPLYASVRAIETKSPTDDRQWLTYWILYSMITLVELTFAKVIEWIPIWSYAKLIFTCWLVIPQFSGAAYVYEHYLRPFFLNPQTINIWYVPRKKDVFSRPDDILTAAEKYMEENGTDAFEKLIHRADKSKRNYDHSTYEYDNVY 630
            MGSGAG+FLKVLL+NFDVLAGPVVSLVYPLYASV+AIET+S  DD+QWLTYW+LYS++TL+ELTFAK+IEW+PIWSY KLI TCWLVIP FSGAAYVYEH++RP F+NP++INIWYVP+K D+F +PDD+LTAAEKY+ ENG DAFEK++ RADKSKR   H    Y+ +Y
Sbjct:    1 MGSGAGNFLKVLLRNFDVLAGPVVSLVYPLYASVQAIETQSHADDKQWLTYWVLYSLLTLIELTFAKLIEWLPIWSYMKLILTCWLVIPYFSGAAYVYEHFVRPVFVNPRSINIWYVPKKMDIFRKPDDVLTAAEKYIAENGPDAFEKILSRADKSKRYNKHEYESYETMY 171          
BLAST of CN186377 vs. ExPASy Swiss-Prot
Match: HA22C_ARATH (HVA22-like protein c OS=Arabidopsis thaliana GN=HVA22C PE=2 SV=1)

HSP 1 Score: 205.682 bits (522), Expect = 2.545e-52
Identity = 97/161 (60.25%), Postives = 127/161 (78.88%), Query Frame = 1
Query:  124 SGAGSFLKVLLKNFDVLAGPVVSLVYPLYASVRAIETKSPTDDRQWLTYWILYSMITLVELTFAKVIEWIPIWSYAKLIFTCWLVIPQFSGAAYVYEHYLRPFFLNPQ--TINIWYVPRKKDVF---SRPDDILTAAEKYMEENGTDAFEKLIHRADKSKR 591
            SG  + L+VL+KNFDVLA P+V+LVYPLYASV+AIET+S  +D QWLTYW+LY++I+L ELTF+K +EW PIW Y KL   CWLV+PQF+GA ++Y+H++RPF+ +PQ  T  IWYVP KK  F      DDILTAAEKYME++GT+AFE++I + D  +R
Sbjct:    5 SGDDNVLQVLIKNFDVLALPLVTLVYPLYASVKAIETRSLPEDEQWLTYWVLYALISLFELTFSKPLEWFPIWPYMKLFGICWLVLPQFNGAEHIYKHFIRPFYRDPQRATTKIWYVPHKKFNFFPKRDDDDILTAAEKYMEQHGTEAFERMIVKKDSYER 165          
BLAST of CN186377 vs. ExPASy Swiss-Prot
Match: HA22B_ARATH (HVA22-like protein b OS=Arabidopsis thaliana GN=HVA22B PE=2 SV=2)

HSP 1 Score: 199.904 bits (507), Expect = 1.397e-50
Identity = 95/172 (55.23%), Postives = 124/172 (72.09%), Query Frame = 1
Query:  118 MGSGAGSFLKVLLKNFDVLAGPVVSLVYPLYASVRAIETKSPTDDRQWLTYWILYSMITLVELTFAKVIEWIPIWSYAKLIFTCWLVIPQFSGAAYVYEHYLRPFFLNPQTINIWYVPRKKDVFSRPDDILTAAEKYMEENGTDA-FEKLIHRADKSKRNYDHSTYEYDNVY 630
            M SG GS +KV+ KNFDV+AGPV+SLVYPLYASVRAIE++S  DD+QWLTYW LYS+I L ELTF +++EWIP++ YAKL  T WLV+P  +GAAY+YEHY+R F L+P T+N+WYVP KKD     DD+   A K+   N + A  EK++   D S +   HS ++   +Y
Sbjct:    1 MSSGIGSLVKVIFKNFDVIAGPVISLVYPLYASVRAIESRSHGDDKQWLTYWALYSLIKLFELTFFRLLEWIPLYPYAKLALTSWLVLPGMNGAAYLYEHYVRSFLLSPHTVNVWYVPAKKD-----DDLGATAGKFTPVNDSGAPQEKIVSSVDTSAKYVGHSAFDDAYIY 167          
BLAST of CN186377 vs. ExPASy Swiss-Prot
Match: HA22F_ARATH (HVA22-like protein f OS=Arabidopsis thaliana GN=HVA22F PE=2 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 8.513e-32
Identity = 66/156 (42.31%), Postives = 96/156 (61.54%), Query Frame = 1
Query:  139 FLKVLLKNFDVLAGPVVSLVYPLYASVRAIETKSPTDDRQWLTYWILYSMITLVELTFAKVIEWIPIWSYAKLIFTCWLVIPQFSGAAYVYEHYLRPFFLNPQTI--NIWYVPRKKDVFSRPD-DILTAAEKYMEENGTDAFEKLIHRADKSKRNY 597
            F+  + K FD L GP V L+YPLYAS RAIE+ +  DD+QWLTYWI+YS+IT+ EL+  +V+ W+P W Y KL+F  WLV+P FSGAAY+Y +++R +      +     Y   ++ V      D   + + Y++  G D+ EK I  A+K  R +
Sbjct:    3 FIIAIAKRFDALVGPGVMLLYPLYASFRAIESPTMLDDQQWLTYWIIYSLITIFELSVWRVLAWLPFWPYLKLLFCMWLVLPMFSGAAYIYSNFVRQYVKIGMNVGGGTNYTDEQRRVLQMMSLDARKSVQDYVDRFGWDSVEKAIKAAEKETRKH 158          
BLAST of CN186377 vs. ExPASy Swiss-Prot
Match: HA22E_ARATH (HVA22-like protein e OS=Arabidopsis thaliana GN=HVA22E PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 8.245e-27
Identity = 55/88 (62.50%), Postives = 65/88 (73.86%), Query Frame = 1
Query:  172 LAGPVVSLVYPLYASVRAIETKSPTDDRQWLTYWILYSMITLVELTFAKVIEWIPIWSYAKLIFTCWLVIPQFSGAAYVYEHYLRPFF 435
            LAGPVV L+YPLYASV AIE+ S  DD QWL YWILYS +TL EL    ++EWIPIW  AKL+F  WLV+PQF GAA++Y   +R  F
Sbjct:   14 LAGPVVMLLYPLYASVIAIESPSKVDDEQWLAYWILYSFLTLSELILQSLLEWIPIWYTAKLVFVAWLVLPQFRGAAFIYNKVVREQF 101          
BLAST of CN186377 vs. ExPASy Swiss-Prot
Match: HA22D_ARATH (HVA22-like protein d OS=Arabidopsis thaliana GN=HVA22D PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 4.524e-25
Identity = 49/87 (56.32%), Postives = 63/87 (72.41%), Query Frame = 1
Query:  175 AGPVVSLVYPLYASVRAIETKSPTDDRQWLTYWILYSMITLVELTFAKVIEWIPIWSYAKLIFTCWLVIPQFSGAAYVYEHYLRPFF 435
            AGP+V L+YPLYASV A+E+ +  DD QWL YWI+YS ++L EL    +IEWIPIW   KL+F  WLV+PQF GAA++Y   +R  F
Sbjct:   15 AGPIVMLLYPLYASVIAMESTTKVDDEQWLAYWIIYSFLSLTELILQSLIEWIPIWYTVKLVFVAWLVLPQFQGAAFIYNRVVREQF 101          
BLAST of CN186377 vs. ExPASy Swiss-Prot
Match: HVA22_HORVU (Protein HVA22 OS=Hordeum vulgare GN=HVA22 PE=2 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 2.933e-24
Identity = 48/92 (52.17%), Postives = 66/92 (71.74%), Query Frame = 1
Query:  151 LLKNFDVLAGPVVSLVYPLYASVRAIETKSPTDDRQWLTYWILYSMITLVELTFAKVIEWIPIWSYAKLIFTCWLVIPQFSGAAYVYEHYLR 426
            LL +   +AGP ++L+YPLYASV A+E+ S  DD QWL YWILYS ITL+E+    V+ WIP+W   KL+F  WL +PQF GA+++Y+  +R
Sbjct:    7 LLTHLHSVAGPSITLLYPLYASVCAMESPSKVDDEQWLAYWILYSFITLLEMVAEPVLYWIPVWYPVKLLFVAWLALPQFKGASFIYDKVVR 98          
BLAST of CN186377 vs. ExPASy Swiss-Prot
Match: YOP1_CRYNE (Protein YOP1 OS=Cryptococcus neoformans GN=YOP1 PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 6.548e-16
Identity = 52/150 (34.67%), Postives = 78/150 (52.00%), Query Frame = 1
Query:  139 FLKVLLKNFDV--LAGPVVSLV---YPLYASVRAIETKSPTDDRQWLTYWILYSMITLVE-LTFAKVIEWIPIWSYAKLIFTCWLVIPQFSGAAYVYEHYLRPFFLNPQTINIWYVPRKKDVFSRPDDILTAAEKYMEENGTDAFEKLIH 570
            F  VLL  F++  LA P+ +L+    P Y S+ AIE+    DD+QWLTYW+++  + LVE +    V+ W+P++   K +FT WL++P   GA  +Y H+LRP   N ++       R +  F   D +  A E      GT A     H
Sbjct:   62 FSSVLLIFFNMFGLAQPISNLIGWALPAYLSILAIESPQTNDDKQWLTYWVVFGSLNLVESMGLRAVLYWVPMYFVFKTLFTIWLMLPATRGAEILYFHFLRPMVGNVKS-------RSQSSFGTSDPL--AKETGFNPAGTTAPSSFAH 202          
BLAST of CN186377 vs. ExPASy Swiss-Prot
Match: YOP1_SCHPO (Protein yop1 OS=Schizosaccharomyces pombe GN=yop1 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.106e-14
Identity = 37/113 (32.74%), Postives = 65/113 (57.52%), Query Frame = 1
Query:  124 SGAGSFLKVLLKNFD-VLAGPVVSLVYPLYASVRAIETKSPTDDRQWLTYWILYSMITLVELTFAKVIEWIPIWSYAKLIFTCWLVIPQFSGAAYVYEHYLRPFFLNPQTINI 459
            + AG +   L  N+   L   +++   P + S+ AIET +  DD QWLTY+++ S + ++E     ++ ++P++   K IF  WL +P+F+GA  +Y H +RP ++ P  I I
Sbjct:   41 TAAGIYALFLFLNWGGFLLTNLLAFAMPAFFSINAIETTNKADDTQWLTYYLVTSFLNVIEYWSQLILYYVPVYWLLKAIFLIWLALPKFNGATIIYRHLIRP-YITPHVIRI 152          
BLAST of CN186377 vs. ExPASy Swiss-Prot
Match: YOP1_USTMA (Protein YOP1 OS=Ustilago maydis GN=YOP1 PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 4.693e-14
Identity = 37/98 (37.76%), Postives = 58/98 (59.18%), Query Frame = 1
Query:  163 FDVLAGPVVSLV---YPLYASVRAIETKSPTDDRQWLTYWILYSMITLVELTFAKVIEWIPIWSYAKLIFTCWLVIPQFSGAAYVYEHYLRPFFLNPQ 447
            F++ AG + +L+    P Y S++A+E+  P DD QWLTYW+++ + T +E     V+ +IP +   K +   WL++PQ  GA  VY   +RP FL  Q
Sbjct:   57 FNIAAGFLTNLLGFFVPAYFSLKALESPQPQDDIQWLTYWVVFGLFTFLETFINIVLYYIPWYYTIKTLAIVWLMLPQTQGAKMVYSRIIRPVFLTTQ 154          
The following BLAST results are available for this feature:
BLAST of CN186377 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 27
Match NameE-valueIdentityDescription
HA22A_ARATH1.638e-7574.27HVA22-like protein a OS=Arabidopsis thaliana GN=HV... [more]
HA22C_ARATH2.545e-5260.25HVA22-like protein c OS=Arabidopsis thaliana GN=HV... [more]
HA22B_ARATH1.397e-5055.23HVA22-like protein b OS=Arabidopsis thaliana GN=HV... [more]
HA22F_ARATH8.513e-3242.31HVA22-like protein f OS=Arabidopsis thaliana GN=HV... [more]
HA22E_ARATH8.245e-2762.50HVA22-like protein e OS=Arabidopsis thaliana GN=HV... [more]
HA22D_ARATH4.524e-2556.32HVA22-like protein d OS=Arabidopsis thaliana GN=HV... [more]
HVA22_HORVU2.933e-2452.17Protein HVA22 OS=Hordeum vulgare GN=HVA22 PE=2 SV=... [more]
YOP1_CRYNE6.548e-1634.67Protein YOP1 OS=Cryptococcus neoformans GN=YOP1 PE... [more]
YOP1_SCHPO2.106e-1432.74Protein yop1 OS=Schizosaccharomyces pombe GN=yop1 ... [more]
YOP1_USTMA4.693e-1437.76Protein YOP1 OS=Ustilago maydis GN=YOP1 PE=3 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0002M21_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002M21, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186377 ID=CN186377; Name=CN186377; organism=Citrus sinensis; type=EST; length=810bp
GCGGTAAAACAGCAACCACAGTCTGACTAGAAAAACCAAAAACAGCTTGT
AACTTAGGCAAATATTTCGAGATCAGAACAAGCTAAATAAACGAGGAAAA
CGCTTTGAAGATCAGATATGGGATCTGGGGCTGGAAGCTTCTTAAAAGTT
TTACTTAAGAACTTTGATGTTCTTGCTGGGCCTGTGGTCAGTCTTGTTTA
TCCTCTGTATGCCTCTGTTAGGGCAATTGAGACCAAGTCTCCTACTGATG
ACCGGCAATGGCTTACTTACTGGATTCTCTATTCTATGATTACCCTTGTT
GAACTCACCTTTGCCAAAGTCATTGAATGGATTCCTATTTGGTCGTATGC
AAAGCTGATTTTTACCTGCTGGCTGGTCATCCCGCAATTCAGTGGTGCTG
CATATGTTTATGAGCATTATTTGAGACCTTTCTTTCTCAACCCTCAGACT
ATTAACATCTGGTATGTCCCAAGAAAGAAGGATGTCTTCAGTAGGCCAGA
TGATATTCTTACTGCTGCAGAGAAATATATGGAAGAGAATGGGACAGATG
CTTTTGAGAAGCTCATTCACAGGGCTGACAAGTCGAAGAGGAATTACGAC
CACTCTACTTACGAATATGACAATGTTTATTGAGTTTCATGGCCCGTGTT
GAGTTGCGTGGCAGCAGAATGAAAAAGACGTCTTTACTGTTACTATAATG
CTTTTTGTTGTGGATACTTTTCCTCTTGTGTTGCAGACTTTTTTTTTATT
TTTTATTTTTATTTTGGGGTTTTGTAAGAGAACTGAATGCTGTATAAGAT
TAAACGCTGT
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