CN186360

Overview
NameCN186360
Unique NameCN186360
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length531
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN186360 vs. ExPASy Swiss-Prot
Match: MTNC_LEPBP (Enolase-phosphatase E1 OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / ATCC 23582 / Paris) GN=mtnC PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 5.123e-13
Identity = 41/76 (53.95%), Postives = 50/76 (65.79%), Query Frame = -2
Query:  306 GDLRKYLSGFFDTAVGNKRETPSYVETPNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGN-----GPFP 518
            GDLR+Y + +FDTAVG KRE  SY    ++L V  PSEI F TD+ +EA AA A G++VVI  RPGN      PFP
Sbjct:  168 GDLRQYFTMYFDTAVGGKREKTSYERIASTLAVS-PSEIRFFTDIVEEAEAANATGMDVVILNRPGNLAQKPHPFP 242          
BLAST of CN186360 vs. ExPASy Swiss-Prot
Match: MTNC_LEPBA (Enolase-phosphatase E1 OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / Ames) GN=mtnC PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 5.123e-13
Identity = 41/76 (53.95%), Postives = 50/76 (65.79%), Query Frame = -2
Query:  306 GDLRKYLSGFFDTAVGNKRETPSYVETPNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGN-----GPFP 518
            GDLR+Y + +FDTAVG KRE  SY    ++L V  PSEI F TD+ +EA AA A G++VVI  RPGN      PFP
Sbjct:  168 GDLRQYFTMYFDTAVGGKREKTSYERIASTLAVS-PSEIRFFTDIVEEAEAANATGMDVVILNRPGNLAQKPHPFP 242          
BLAST of CN186360 vs. ExPASy Swiss-Prot
Match: MTNC_SULSY (Enolase-phosphatase E1 OS=Sulfurihydrogenibium sp. (strain YO3AOP1) GN=mtnC PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 6.691e-13
Identity = 38/89 (42.70%), Postives = 54/89 (60.67%), Query Frame = -2
Query:  264 NSNYGDLRKYLSGFFDTAVGNKRETPSYVETPNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPFPENHGFKTINFFAEI 530
            N+NYGDL    SG+FDT +GNK++  SYV+    +G   PSEILF++D   E  AA +AG  V+  +RP +    +N  +K +  F EI
Sbjct:  138 NTNYGDLNYLFSGYFDTNIGNKKDKQSYVKIAKEIGF-SPSEILFLSDNPDEIIAAASAGYNVIRLVRPLDADHIDNFPYKQVESFDEI 225          
BLAST of CN186360 vs. ExPASy Swiss-Prot
Match: MTNC_LEPIN (Enolase-phosphatase E1 OS=Leptospira interrogans GN=mtnC PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.141e-12
Identity = 39/84 (46.43%), Postives = 52/84 (61.90%), Query Frame = -2
Query:  276 SNYGDLRKYLSGFFDTAVGNKRETPSYVETPNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPFPENHGFKTINF 527
            S++G+L  +   +FDT VG KRE+ SY +    LGV  P +ILF TD+ +EA AAK A L   I  RPGN P P++  FK  +F
Sbjct:  147 SDFGNLTHFFYAYFDTGVGGKRESSSYSKISEQLGV-APEKILFFTDIKEEADAAKEAKLHSAILERPGNYPQPQHSHFKISSF 229          
BLAST of CN186360 vs. ExPASy Swiss-Prot
Match: MTNC_LEPIC (Enolase-phosphatase E1 OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni GN=mtnC PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.141e-12
Identity = 39/84 (46.43%), Postives = 52/84 (61.90%), Query Frame = -2
Query:  276 SNYGDLRKYLSGFFDTAVGNKRETPSYVETPNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPFPENHGFKTINF 527
            S++G+L  +   +FDT VG KRE+ SY +    LGV  P +ILF TD+ +EA AAK A L   I  RPGN P P++  FK  +F
Sbjct:  147 SDFGNLTHFFYAYFDTGVGGKRESSSYSKISEQLGV-APEKILFFTDIKEEADAAKEAKLHSAILERPGNYPQPQHSHFKISSF 229          
BLAST of CN186360 vs. ExPASy Swiss-Prot
Match: MTNC_LEPBL (Enolase-phosphatase E1 OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain L550) GN=mtnC PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.141e-12
Identity = 37/84 (44.05%), Postives = 52/84 (61.90%), Query Frame = -2
Query:  276 SNYGDLRKYLSGFFDTAVGNKRETPSYVETPNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPFPENHGFKTINF 527
            S++GDL +Y S +FDT VG KRE+ SY      LG+  P +ILF TD+ +EA AA+ A  +  +  RPGN P P++   K  +F
Sbjct:  144 SDFGDLTEYFSAYFDTGVGGKRESASYSRIAEQLGI-APEKILFFTDIKEEADAARNAEFKTTLLERPGNAPQPKHSHPKISSF 226          
BLAST of CN186360 vs. ExPASy Swiss-Prot
Match: MTNC_LEPBJ (Enolase-phosphatase E1 OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain JB197) GN=mtnC PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.141e-12
Identity = 37/84 (44.05%), Postives = 52/84 (61.90%), Query Frame = -2
Query:  276 SNYGDLRKYLSGFFDTAVGNKRETPSYVETPNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPFPENHGFKTINF 527
            S++GDL +Y S +FDT VG KRE+ SY      LG+  P +ILF TD+ +EA AA+ A  +  +  RPGN P P++   K  +F
Sbjct:  144 SDFGDLTEYFSAYFDTGVGGKRESASYSRIAEQLGI-APEKILFFTDIKEEADAARNAEFKTTLLERPGNAPQPKHSHPKISSF 226          
BLAST of CN186360 vs. ExPASy Swiss-Prot
Match: MTNC_PERMH (Enolase-phosphatase E1 OS=Persephonella marina (strain DSM 14350 / EX-H1) GN=mtnC PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 3.321e-12
Identity = 34/89 (38.20%), Postives = 57/89 (64.04%), Query Frame = -2
Query:  264 NSNYGDLRKYLSGFFDTAVGNKRETPSYVETPNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPFPENHGFKTINFFAEI 530
            ++ YGDL  + SGFFDT  GNK++  SY++   ++G+ KP  ILF++D   E  AA  AG++V+   RP + P+ +N  ++ ++ F +I
Sbjct:  137 HTEYGDLTGFFSGFFDTKTGNKKDPQSYLKIAEAVGL-KPENILFLSDNPDEIRAAAEAGMKVIKISRPEDSPYIDNFPYRQVDSFDQI 224          
BLAST of CN186360 vs. ExPASy Swiss-Prot
Match: MTNC_AQUAE (Enolase-phosphatase E1 OS=Aquifex aeolicus GN=mtnC PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 4.337e-12
Identity = 39/89 (43.82%), Postives = 56/89 (62.92%), Query Frame = -2
Query:  264 NSNYGDLRKYLSGFFDTAVGNKRETPSYVETPNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPFPENHGFKTINFFAEI 530
            +S YGD+R   SGFFDT +G+KRE  SY +    +G+  P EILF++D  +E  AAK AG++V+ S+R G  P   +  F+ I  F E+
Sbjct:  137 HSVYGDIRNLFSGFFDTKIGSKRERSSYEKIAKEIGL-PPHEILFISDNPEELKAAKEAGMKVIQSVREGVEP---SGDFEKITSFREL 221          
BLAST of CN186360 vs. ExPASy Swiss-Prot
Match: ENOPH_SCHPO (Enolase-phosphatase E1 OS=Schizosaccharomyces pombe GN=SPAC644.08 PE=2 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 8.179e-11
Identity = 35/86 (40.70%), Postives = 49/86 (56.98%), Query Frame = -2
Query:  273 NSNYGDLRKYLSGFFDTAVGNKRETPSYVETPNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPFPENHGFKTINFF 530
            +S+ G+L KY SG++DT +G K E  SYV+    +G   P E LF++D   E  AA+  GL   + +RPGN P  +  GF   N F
Sbjct:  128 HSDAGNLLKYFSGYYDTTIGLKTECGSYVKI---VGNSNPREWLFLSDNINELKAARKVGLHTGLVVRPGNDPVVDTSGFPVYNSF 210          
The following BLAST results are available for this feature:
BLAST of CN186360 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
MTNC_LEPBP5.123e-1353.95Enolase-phosphatase E1 OS=Leptospira biflexa serov... [more]
MTNC_LEPBA5.123e-1353.95Enolase-phosphatase E1 OS=Leptospira biflexa serov... [more]
MTNC_SULSY6.691e-1342.70Enolase-phosphatase E1 OS=Sulfurihydrogenibium sp.... [more]
MTNC_LEPIN1.141e-1246.43Enolase-phosphatase E1 OS=Leptospira interrogans G... [more]
MTNC_LEPIC1.141e-1246.43Enolase-phosphatase E1 OS=Leptospira interrogans s... [more]
MTNC_LEPBL1.141e-1244.05Enolase-phosphatase E1 OS=Leptospira borgpeterseni... [more]
MTNC_LEPBJ1.141e-1244.05Enolase-phosphatase E1 OS=Leptospira borgpeterseni... [more]
MTNC_PERMH3.321e-1238.20Enolase-phosphatase E1 OS=Persephonella marina (st... [more]
MTNC_AQUAE4.337e-1243.82Enolase-phosphatase E1 OS=Aquifex aeolicus GN=mtnC... [more]
ENOPH_SCHPO8.179e-1140.70Enolase-phosphatase E1 OS=Schizosaccharomyces pomb... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS05_0002M12_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002M12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186360 ID=CN186360; Name=CN186360; organism=Citrus sinensis; type=EST; length=531bp
TTTTTTTTTTTTTTTTTGTTTTTTGAGCAAAAGATATTCCCTTTCAATAT
GCACAAAACGGAATAGGATCCTCTCCTGATCTTTGATCAGATCAGGGGAG
GACCCTGATCCGCACAAAACATATTCGAGGAACCCTTGACTCTTTTAAAA
TATCTTATGAGACTAAAAGAGAGAGTTCACAACAAGAGTAAGGGCGTTAT
ATCTTCTTATAGTTTAACTACACATATCTCATTTGAAATGATTATGGAAG
ATTTCTGCTTTTAAATTTCCGCGAAAAAATTGATTGTCTTGAAGCCATGG
TTCTCTGGAAAAGGTCCATTTCCTGGCCGGATGGAAATTACCACCTCCAA
ACCCGCAGCTTTTGCAGCTGTAGCTTCTTGATATACATCTGTCACAAATA
AGATCTCGGAGGGCTTATCAACTCCCAATGAGTTTGGGGTTTCGACATAA
CTTGGTGTTTCTCTTTTGTTCCCCACTGCAGTGTCGAAAAAGCCAGATAA
ATATTTTCTTAAATCCCCGTAATTTGAATTT
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