CX674954
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX674954 vs. ExPASy Swiss-Prot
Match: TT12_ARATH (Protein TRANSPARENT TESTA 12 OS=Arabidopsis thaliana GN=TT12 PE=2 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 4.532e-28 Identity = 66/183 (36.07%), Postives = 106/183 (57.92%), Query Frame = 1 Query: 157 ESKKLWYLAGPAIFTSVCQYSLGAVTQVFAGHVSTIALAAVSVENSVIXXXXXXXXXXXXXXLETLCGQAYGAGQLDMLGVYMQRSWVILNATALILMLIYIFAQQLLSLIGQTPSISKAAGTLSIWMIPQLFAYAVNFPIAKFLQAQSKMMVMAIIAASALVLHTFLSWLLMLELGWGLVGA 705 ESK LW L+G +I SV Y L VT +F GH+ ++ LA S+ I ++T+CGQAYGA Q +G+ QR+ V+ A A+ L +Y ++ +L +GQ+ +I+ + MIPQ++A+A+ P+ +FLQAQ+ + +A ++ +LHT L+WL+ L +GL+GA Sbjct: 51 ESKLLWTLSGASIVVSVLNYMLSFVTVMFTGHLGSLQLAGASIATVGIQGLAYGIMLGMASAVQTVCGQAYGARQYSSMGIICQRAMVLHLAAAVFLTFLYWYSGPILKTMGQSVAIAHEGQIFARGMIPQIYAFALACPMQRFLQAQNIVNPLAYMSLGVFLLHTLLTWLVTNVLDFGLLGA 233
BLAST of CX674954 vs. ExPASy Swiss-Prot
Match: S47A1_RAT (Multidrug and toxin extrusion protein 1 OS=Rattus norvegicus GN=Slc47a1 PE=1 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 3.725e-14 Identity = 50/186 (26.88%), Postives = 89/186 (47.85%), Query Frame = 1 Query: 148 FSKESKKLWYLAGPAIFTSVCQYSLGAVTQVFAGHVSTIALAAVSVENSVIXXXXXXXXXXXXXXLETLCGQAYGAGQLDMLGVYMQRSWVILNATALILMLIYIFAQQLLSLIGQTPSISKAAGTLSIWMIPQLFAYAVNFPIAKFLQAQSKMMVMAIIAASALVLHTFLSWLLMLELGWGLVGA 705 F +E + L LAGPA + + + ++ VF GH+ + L AV++ +VI +TL Q YG+ L +GV +QR +IL ++I +Q+L L Q P +S+ T + IP L A + K+L Q ++ I +A +++ ++L + +L G++G+ Sbjct: 30 FQEELRALLVLAGPAFLAQLMMFLISFISSVFCGHLGKLELDAVTLAIAVINVTGISVGHGLSSACDTLISQTYGSQNLKHVGVILQRGTLILLLCCFPCWALFINTEQILLLFRQDPDVSRLTQTYVMVFIPALPAAFLYTLQVKYLLNQGIVLPQVITGIAANLVNALANYLFLHQLHLGVMGS 215
BLAST of CX674954 vs. ExPASy Swiss-Prot
Match: S47A1_XENTR (Multidrug and toxin extrusion protein 1 OS=Xenopus tropicalis GN=slc47a1 PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.084e-13 Identity = 47/188 (25.00%), Postives = 90/188 (47.87%), Query Frame = 1 Query: 142 IEFSKESKKLWYLAGPAIFTSVCQYSLGAVTQVFAGHVSTIALAAVSVENSVIXXXXXXXXXXXXXXLETLCGQAYGAGQLDMLGVYMQRSWVILNATALILMLIYIFAQQLLSLIGQTPSISKAAGTLSIWMIPQLFAYAVNFPIAKFLQAQSKMMVMAIIAASALVLHTFLSWLLMLELGWGLVGA 705 +E +E+++L LA PA + + + + V+ +F GH+ + L AVS+ ++I +TL Q +G L ++G+ +QR +IL + I + +L L Q P +SK + +P L A + +AK+LQ Q + + A + + +++L+ LG G++G+ Sbjct: 43 MEVWQEAQQLLALAAPAFLSQLMIFLISIVSSIFCGHLGKVELDAVSLAITIINITGVAVGTGLAGACDTLISQTFGGSNLKLVGIILQRGILILLLFCFPCWALLINTESILLLFRQDPEVSKLTQIYVLIFLPALPAAFLYQLLAKYLQNQGIIYPQVLTGFIANIFNALFNYILLYVLGLGVMGS 230
BLAST of CX674954 vs. ExPASy Swiss-Prot
Match: S47A1_HUMAN (Multidrug and toxin extrusion protein 1 OS=Homo sapiens GN=SLC47A1 PE=1 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.084e-13 Identity = 48/186 (25.81%), Postives = 88/186 (47.31%), Query Frame = 1 Query: 148 FSKESKKLWYLAGPAIFTSVCQYSLGAVTQVFAGHVSTIALAAVSVENSVIXXXXXXXXXXXXXXLETLCGQAYGAGQLDMLGVYMQRSWVILNATALILMLIYIFAQQLLSLIGQTPSISKAAGTLSIWMIPQLFAYAVNFPIAKFLQAQSKMMVMAIIAASALVLHTFLSWLLMLELGWGLVGA 705 F +E + L LAGPA + + + ++ VF GH+ + L AV++ +VI +TL Q YG+ L +GV +QRS ++L +++ Q +L L Q P +S+ T IP L A + K+L Q ++ + +A +++ ++L + +L G++G+ Sbjct: 31 FREELRALLVLAGPAFLVQLMVFLISFISSVFCGHLGKLELDAVTLAIAVINVTGVSVGFGLSSACDTLISQTYGSQNLKHVGVILQRSALVLLLCCFPCWALFLNTQHILLLFRQDPDVSRLTQTYVTIFIPALPATFLYMLQVKYLLNQGIVLPQIVTGVAANLVNALANYLFLHQLHLGVIGS 216
BLAST of CX674954 vs. ExPASy Swiss-Prot
Match: S47A1_PONAB (Multidrug and toxin extrusion protein 1 OS=Pongo abelii GN=SLC47A1 PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.415e-13 Identity = 49/186 (26.34%), Postives = 87/186 (46.77%), Query Frame = 1 Query: 148 FSKESKKLWYLAGPAIFTSVCQYSLGAVTQVFAGHVSTIALAAVSVENSVIXXXXXXXXXXXXXXLETLCGQAYGAGQLDMLGVYMQRSWVILNATALILMLIYIFAQQLLSLIGQTPSISKAAGTLSIWMIPQLFAYAVNFPIAKFLQAQSKMMVMAIIAASALVLHTFLSWLLMLELGWGLVGA 705 F +E + L LAGPA + + + ++ VF GH+ + L AV++ +VI +TL Q YG+ L +GV +QRS +IL +++ Q +L L Q P +S+ T IP L A + K+L Q ++ + +A +++ ++L + +L G +G+ Sbjct: 31 FREELRALLVLAGPAFLVQLMVFLISFISSVFCGHLGKLELDAVTLAIAVINVTGVSVGFGLSSACDTLISQTYGSQNLKHVGVILQRSALILLLCCFPCWALFLNTQHILLLFRQDPDVSRLTQTYVTIFIPALPATFLYMLQVKYLLNQGIVLPQIVTGVAANLVNALANYLFLHQLHLGAIGS 216
BLAST of CX674954 vs. ExPASy Swiss-Prot
Match: S47A2_MOUSE (Multidrug and toxin extrusion protein 2 OS=Mus musculus GN=Slc47a2 PE=1 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.849e-13 Identity = 49/184 (26.63%), Postives = 90/184 (48.91%), Query Frame = 1 Query: 154 KESKKLWYLAGPAIFTSVCQYSLGAVTQVFAGHVSTIALAAVSVENSVIXXXXXXXXXXXXXXLETLCGQAYGAGQLDMLGVYMQRSWVILNATALILMLIYIFAQQLLSLIGQTPSISKAAGTLSIWMIPQLFAYAVNFPIAKFLQAQSKMMVMAIIAASALVLHTFLSWLLMLELGWGLVGA 705 +E+ L LAGP + + + V+ +F GH+ + L AV++ SV+ +TL Q++G L +GV +QR +IL I++ ++LL L+ Q P +++ A + IP L A + ++LQ+Q +M I+ +A V++ ++ L+ L G+VG+ Sbjct: 42 REAAALVALAGPVFLAQLMIFLISIVSSIFCGHLGKVELDAVTLAVSVVNVTGISVGTGLASACDTLMSQSFGGKNLKRVGVILQRGILILLLCCFPCWAIFLNTERLLLLLRQDPDVARLAQVYVMICIPALPAAFLFQLQTRYLQSQGIIMPQVIVGIAANVVNVGMNAFLLYALDLGVVGS 225
BLAST of CX674954 vs. ExPASy Swiss-Prot
Match: S47A1_RABIT (Multidrug and toxin extrusion protein 1 OS=Oryctolagus cuniculus GN=SLC47A1 PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.849e-13 Identity = 50/187 (26.74%), Postives = 90/187 (48.13%), Query Frame = 1 Query: 145 EFSKESKKLWYLAGPAIFTSVCQYSLGAVTQVFAGHVSTIALAAVSVENSVIXXXXXXXXXXXXXXLETLCGQAYGAGQLDMLGVYMQRSWVILNATALILMLIYIFAQQLLSLIGQTPSISKAAGTLSIWMIPQLFAYAVNFPIAKFLQAQSKMMVMAIIAASALVLHTFLSWLLMLELGWGLVGA 705 +F +E + L LA PA + + + V+ VF GH+S + L AV++ +VI +TL Q YG+ L +GV +QR +IL L +++ Q +L L Q P++S+ T IP L A + K+L Q ++ + +A +++ ++L + +L G++G+ Sbjct: 29 DFREELRALLVLACPAFLAQLMVFLISFVSSVFCGHLSKLELNAVTLAIAVINVMGVSVGFGLSSACDTLISQTYGSRNLKHVGVILQRGSLILLLCCLPCWALFLNTQHILLLFRQDPAVSRLTQTYVTIFIPALPATFLYTLQVKYLLNQGIVLPQVVTGVAANLVNALANYLFVYQLHLGVMGS 215
BLAST of CX674954 vs. ExPASy Swiss-Prot
Match: S47A1_MOUSE (Multidrug and toxin extrusion protein 1 OS=Mus musculus GN=Slc47a1 PE=1 SV=2) HSP 1 Score: 75.0998 bits (183), Expect = 4.118e-13 Identity = 48/186 (25.81%), Postives = 88/186 (47.31%), Query Frame = 1 Query: 148 FSKESKKLWYLAGPAIFTSVCQYSLGAVTQVFAGHVSTIALAAVSVENSVIXXXXXXXXXXXXXXLETLCGQAYGAGQLDMLGVYMQRSWVILNATALILMLIYIFAQQLLSLIGQTPSISKAAGTLSIWMIPQLFAYAVNFPIAKFLQAQSKMMVMAIIAASALVLHTFLSWLLMLELGWGLVGA 705 F +E + L LAGPA + + + ++ VF GH+ + L AV++ +VI +TL Q YG+ L +GV +QR +IL ++I +Q+L L Q P +S+ T + IP L A + K+L Q ++ + +A +++ +++ + L G++G+ Sbjct: 31 FLEELRALLVLAGPAFLAQLMMFLISFISSVFCGHLGKLELDAVTLAIAVINVTGISVGHGLSSACDTLISQTYGSQNLKHVGVILQRGTLILLLCCFPCWALFINTEQILLLFRQDPDVSRLTQTYVMIFIPALPAAFLYTLQVKYLLNQGIVLPQIMTGIAANLVNALANYVFLYHLHLGVMGS 216
BLAST of CX674954 vs. ExPASy Swiss-Prot
Match: YJ2D_SCHPO (Uncharacterized transporter C4B3.13 OS=Schizosaccharomyces pombe GN=SPCC4B3.13 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.855e-11 Identity = 61/239 (25.52%), Postives = 103/239 (43.10%), Query Frame = 1 Query: 10 KQPLLSLSTGDPGQGQNLTTTSSSATFIAEVDDIPPITGAVDFFIEFS-----KESKKLWYLAGPAIFTSVCQYSLGAVTQVFAGHVSTIALAAVSVENSVIXXXXXXXXXXXXXXLETLCGQAYGAGQLDMLGVYMQRSWVILNATALILMLIYIFAQQLLSLIGQTPSISKAAGTLSIWMIPQLFAYAVNFPIAKFLQAQSKMMVMAIIAASALVLHTFLSWLLMLE--LGWGLVGA 705 ++P SL P + T S A + E ++ I + +F+ KE L A P + TS+ QY T GH+ LAA S+ N L+T+ Q++G+G +M+G+++QR IL + LI+ + +L + Q P A M+ AYA+ + +FLQ Q + I A + ++ FL++L + +G+G +GA Sbjct: 44 ERPTTSLRKPTPRVQRPATDVSYGA--LEETEENESIASGLSVQEDFNSKAWWKELTLLIKFATPVVLTSLLQYGEVVTTVFSLGHLGKTELAAASLSNMTATITAFAIYQGIVSALDTVGTQSFGSGNYEMVGLHLQRILAILLLIQFPIFLIWWKIEGILLFLRQDPLTCMFAAKYMRVMMLASPAYALFEALKRFLQVQGIFHPVTYILAIVVPINIFLNYLFVWSPWVGFGFLGA 280 The following BLAST results are available for this feature:
BLAST of CX674954 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 9
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX674954 ID=CX674954; Name=CX674954; organism=Citrus sinensis; type=EST; length=705bpback to top |